RNA–Protein interactions for RNA: ENST00000599082.1

SOX2-OT-231, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 839 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-231ENST00000599082 CCDC168Q8NDH2 2452 aa-1.4□□□□□ -2.63
SOX2-OT-231ENST00000599082 PLECQ15149 4684 aaKnown RBP-1.4□□□□□ -2.63
SOX2-OT-231ENST00000599082 LAMA3Q16787 3333 aa-1.4□□□□□ -2.63
SOX2-OT-231ENST00000599082 PKHD1L1Q86WI1 4243 aa-1.4□□□□□ -2.63
SOX2-OT-231ENST00000599082 COL4A6Q14031 1691 aa-1.41□□□□□ -2.63
SOX2-OT-231ENST00000599082 APLNQ9ULZ1 77 aa-1.41□□□□□ -2.64
SOX2-OT-231ENST00000599082 MARF1Q9Y4F3 1742 aaKnown RBP-1.42□□□□□ -2.64
SOX2-OT-231ENST00000599082 PCNX1Q96RV3 2341 aa-1.42□□□□□ -2.64
SOX2-OT-231ENST00000599082 TOPAZ1Q8N9V7 1692 aa-1.42□□□□□ -2.64
SOX2-OT-231ENST00000599082 KRTDAPP60985 99 aa-1.43□□□□□ -2.64
SOX2-OT-231ENST00000599082 TMEM203Q969S6 136 aa-1.43□□□□□ -2.64
SOX2-OT-231ENST00000599082 PAPPA2Q9BXP8 1791 aa-1.44□□□□□ -2.64
SOX2-OT-231ENST00000599082 MTORP42345 2549 aa-1.44□□□□□ -2.64
SOX2-OT-231ENST00000599082 CUBNO60494 3623 aa-1.44□□□□□ -2.64
SOX2-OT-231ENST00000599082 TEX15Q9BXT5 2789 aa-1.45□□□□□ -2.64
SOX2-OT-231ENST00000599082 A0A087WVE0 104 aa-1.45□□□□□ -2.64
SOX2-OT-231ENST00000599082 CPSF4LA6NMK7 179 aaKnown RBP-1.45□□□□□ -2.64
SOX2-OT-231ENST00000599082 LINC00587B1AMM8 73 aa-1.45□□□□□ -2.64
SOX2-OT-231ENST00000599082 ABCA3Q99758 1704 aa-1.46□□□□□ -2.64
SOX2-OT-231ENST00000599082 CGREF1Q99674 301 aa-1.46□□□□□ -2.64
SOX2-OT-231ENST00000599082 ANK3Q12955 4377 aaKnown RBP-1.46□□□□□ -2.64
SOX2-OT-231ENST00000599082 A0A1B0GU69 56 aa-1.47□□□□□ -2.64
SOX2-OT-231ENST00000599082 hADV29S1A0JD25 119 aa-1.47□□□□□ -2.64
SOX2-OT-231ENST00000599082 MRPS10P82664 201 aaKnown RBP-1.47□□□□□ -2.64
SOX2-OT-231ENST00000599082 SARNPP82979 210 aaKnown RBP-1.47□□□□□ -2.64
SOX2-OT-231ENST00000599082 ANKRD36A6QL64 1941 aa-1.47□□□□□ -2.64
SOX2-OT-231ENST00000599082 KRTAP19-6Q3LI70 58 aa-1.48□□□□□ -2.65
SOX2-OT-231ENST00000599082 LYSTQ99698 3801 aa-1.49□□□□□ -2.65
SOX2-OT-231ENST00000599082 TACC2O95359 2948 aa-1.5□□□□□ -2.65
SOX2-OT-231ENST00000599082 SRCAPQ6ZRS2 3230 aa-1.5□□□□□ -2.65
SOX2-OT-231ENST00000599082 KRTAP6-2Q3LI66 62 aa-1.5□□□□□ -2.65
SOX2-OT-231ENST00000599082 GTF2H5Q6ZYL4 71 aa-1.5□□□□□ -2.65
SOX2-OT-231ENST00000599082 CCDC141Q6ZP82 1450 aa-1.5□□□□□ -2.65
SOX2-OT-231ENST00000599082 C7orf77A4D0Y5 90 aa-1.51□□□□□ -2.65
SOX2-OT-231ENST00000599082 TMEM262E9PQX1 116 aa-1.52□□□□□ -2.65
SOX2-OT-231ENST00000599082 SPRR2EP22531 72 aa-1.52□□□□□ -2.65
SOX2-OT-231ENST00000599082 SPRR2AP35326 72 aa-1.52□□□□□ -2.65
SOX2-OT-231ENST00000599082 HSD52Q0P140 79 aa-1.52□□□□□ -2.65
SOX2-OT-231ENST00000599082 C6orf201Q7Z4U5 140 aa-1.52□□□□□ -2.65
SOX2-OT-231ENST00000599082 CRIPTQ9P021 101 aa-1.52□□□□□ -2.65
SOX2-OT-231ENST00000599082 A0A0C4DFX4 3053 aa-1.53□□□□□ -2.65
SOX2-OT-231ENST00000599082 ABCC5O15440 1437 aa-1.53□□□□□ -2.65
SOX2-OT-231ENST00000599082 NKTRP30414 1462 aaKnown RBP-1.53□□□□□ -2.65
SOX2-OT-231ENST00000599082 MYO15AQ9UKN7 3530 aa-1.53□□□□□ -2.65
SOX2-OT-231ENST00000599082 VPS13DQ5THJ4 4388 aa-1.54□□□□□ -2.66
SOX2-OT-231ENST00000599082 VAMP8Q9BV40 100 aa-1.54□□□□□ -2.66
SOX2-OT-231ENST00000599082 PKD1P98161 4303 aa-1.54□□□□□ -2.66
SOX2-OT-231ENST00000599082 KNDC1Q76NI1 1749 aa-1.54□□□□□ -2.66
SOX2-OT-231ENST00000599082 FAM135AQ9P2D6 1515 aa-1.55□□□□□ -2.66
SOX2-OT-231ENST00000599082 CEP295Q9C0D2 2601 aa-1.55□□□□□ -2.66
SOX2-OT-231ENST00000599082 EDC4Q6P2E9 1401 aaKnown RBP-1.56□□□□□ -2.66
SOX2-OT-231ENST00000599082 DNAH1Q9P2D7 4330 aa-1.56□□□□□ -2.66
SOX2-OT-231ENST00000599082 PKD1L2Q7Z442 2459 aa-1.56□□□□□ -2.66
SOX2-OT-231ENST00000599082 H3BQF6 201 aa-1.57□□□□□ -2.66
SOX2-OT-231ENST00000599082 H1FX-AS1Q4G0G2 97 aa-1.57□□□□□ -2.66
SOX2-OT-231ENST00000599082 LRRK2Q5S007 2527 aa-1.57□□□□□ -2.66
SOX2-OT-231ENST00000599082 CFAP46Q8IYW2 2715 aa-1.58□□□□□ -2.66
SOX2-OT-231ENST00000599082 TARBP1Q13395 1621 aaKnown RBP-1.58□□□□□ -2.66
SOX2-OT-231ENST00000599082 NBEAQ8NFP9 2946 aa-1.58□□□□□ -2.66
SOX2-OT-231ENST00000599082 A0A0G2JND7 137 aa-1.58□□□□□ -2.66
SOX2-OT-231ENST00000599082 CACFD1Q9UGQ2 172 aa-1.58□□□□□ -2.66
SOX2-OT-231ENST00000599082 EYSQ5T1H1 3165 aa-1.59□□□□□ -2.66
SOX2-OT-231ENST00000599082 DMXL2Q8TDJ6 3036 aa-1.59□□□□□ -2.66
SOX2-OT-231ENST00000599082 ASIPP42127 132 aa-1.59□□□□□ -2.66
SOX2-OT-231ENST00000599082 DEFB135Q30KP9 77 aa-1.59□□□□□ -2.66
SOX2-OT-231ENST00000599082 DEFB107AQ8IZN7 70 aa-1.59□□□□□ -2.66
SOX2-OT-231ENST00000599082 DYNC1H1Q14204 4646 aaKnown RBP-1.6□□□□□ -2.67
SOX2-OT-231ENST00000599082 KIAA1551Q9HCM1 1747 aa-1.6□□□□□ -2.67
SOX2-OT-231ENST00000599082 CMYA5Q8N3K9 4069 aa-1.61□□□□□ -2.67
SOX2-OT-231ENST00000599082 SLIT1O75093 1534 aa-1.61□□□□□ -2.67
SOX2-OT-231ENST00000599082 SHPRHQ149N8 1683 aa-1.61□□□□□ -2.67
SOX2-OT-231ENST00000599082 DNAH7Q8WXX0 4024 aa-1.61□□□□□ -2.67
SOX2-OT-231ENST00000599082 H0Y9P7 68 aa-1.61□□□□□ -2.67
SOX2-OT-231ENST00000599082 I3L3M4 83 aa-1.61□□□□□ -2.67
SOX2-OT-231ENST00000599082 APOBP04114 4563 aaKnown RBP-1.62□□□□□ -2.67
SOX2-OT-231ENST00000599082 REV3LO60673 3130 aa-1.62□□□□□ -2.67
SOX2-OT-231ENST00000599082 HTTP42858 3142 aa-1.62□□□□□ -2.67
SOX2-OT-231ENST00000599082 C20orf202A1L168 122 aa-1.62□□□□□ -2.67
SOX2-OT-231ENST00000599082 PSMG4Q5JS54 123 aa-1.62□□□□□ -2.67
SOX2-OT-231ENST00000599082 CHD7Q9P2D1 2997 aa-1.62□□□□□ -2.67
SOX2-OT-231ENST00000599082 LRRC37AA6NMS7 1700 aa-1.63□□□□□ -2.67
SOX2-OT-231ENST00000599082 TRBV25-1A0A075B6N4 114 aa-1.63□□□□□ -2.67
SOX2-OT-231ENST00000599082 NDUFC1O43677 76 aa-1.63□□□□□ -2.67
SOX2-OT-231ENST00000599082 ZFYVE16Q7Z3T8 1539 aa-1.64□□□□□ -2.67
SOX2-OT-231ENST00000599082 SMG1Q96Q15 3661 aaKnown RBP-1.64□□□□□ -2.67
SOX2-OT-231ENST00000599082 ZZEF1O43149 2961 aa-1.64□□□□□ -2.67
SOX2-OT-231ENST00000599082 MT1HL1P0DM35 61 aa-1.65□□□□□ -2.67
SOX2-OT-231ENST00000599082 PMCHL1Q16048 86 aa-1.65□□□□□ -2.67
SOX2-OT-231ENST00000599082 MLH3Q9UHC1 1453 aa-1.65□□□□□ -2.67
SOX2-OT-231ENST00000599082 MYO9AB2RTY4 2548 aa-1.65□□□□□ -2.67
SOX2-OT-231ENST00000599082 SACSQ9NZJ4 4579 aa-1.65□□□□□ -2.67
SOX2-OT-231ENST00000599082 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-1.66□□□□□ -2.67
SOX2-OT-231ENST00000599082 GNGT2O14610 69 aa-1.66□□□□□ -2.68
SOX2-OT-231ENST00000599082 GNGT1P63211 74 aa-1.66□□□□□ -2.68
SOX2-OT-231ENST00000599082 KALRNO60229 2985 aa-1.67□□□□□ -2.68
SOX2-OT-231ENST00000599082 COL14A1Q05707 1796 aaKnown RBP-1.67□□□□□ -2.68
SOX2-OT-231ENST00000599082 UTP20O75691 2785 aaKnown RBP-1.68□□□□□ -2.68
SOX2-OT-231ENST00000599082 MON2Q7Z3U7 1717 aa-1.68□□□□□ -2.68
SOX2-OT-231ENST00000599082 KNL1Q8NG31 2342 aa-1.68□□□□□ -2.68
SOX2-OT-231ENST00000599082 VPS13BQ7Z7G8 4022 aa-1.69□□□□□ -2.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms