RNA–Protein interactions for RNA: ENST00000598808.5

IRF3-221, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-221ENST00000598808 RAB37Q96AX2 223 aa12.98□□□□□ -0.33
IRF3-221ENST00000598808 K7ERJ3 54 aa12.97□□□□□ -0.33
IRF3-221ENST00000598808 ADAMTSL4-AS1Q5T5F5 129 aa12.97□□□□□ -0.33
IRF3-221ENST00000598808 FAM30AQ9NZY2 134 aa12.97□□□□□ -0.33
IRF3-221ENST00000598808 A4D1N5 150 aa12.97□□□□□ -0.33
IRF3-221ENST00000598808 H3BUT2 72 aa12.97□□□□□ -0.33
IRF3-221ENST00000598808 A0A1W2PPM0 123 aa12.96□□□□□ -0.34
IRF3-221ENST00000598808 FABP2P12104 132 aa12.96□□□□□ -0.34
IRF3-221ENST00000598808 UBE2V1Q13404 147 aa12.96□□□□□ -0.34
IRF3-221ENST00000598808 CFC1BP0CG36 223 aa12.95□□□□□ -0.34
IRF3-221ENST00000598808 CFC1P0CG37 223 aa12.95□□□□□ -0.34
IRF3-221ENST00000598808 Q6ZRU5 148 aa12.95□□□□□ -0.34
IRF3-221ENST00000598808 GTF2H5Q6ZYL4 71 aa12.95□□□□□ -0.34
IRF3-221ENST00000598808 C2orf48Q96LS8 159 aa12.95□□□□□ -0.34
IRF3-221ENST00000598808 PRO1854Q9UHT4 67 aa12.95□□□□□ -0.34
IRF3-221ENST00000598808 CKS1BP61024 79 aa12.93□□□□□ -0.34
IRF3-221ENST00000598808 LYRM7Q5U5X0 104 aa12.93□□□□□ -0.34
IRF3-221ENST00000598808 LINC00308Q8TCZ7 52 aa12.93□□□□□ -0.34
IRF3-221ENST00000598808 DPH3Q96FX2 82 aa12.93□□□□□ -0.34
IRF3-221ENST00000598808 IGKV2-24A0A0C4DH68 120 aa12.92□□□□□ -0.34
IRF3-221ENST00000598808 SDIM1Q6ZPB5 146 aa12.92□□□□□ -0.34
IRF3-221ENST00000598808 XGP55808 180 aa12.91□□□□□ -0.34
IRF3-221ENST00000598808 COX17Q14061 63 aa12.91□□□□□ -0.34
IRF3-221ENST00000598808 KIAA0087Q14695 138 aa12.91□□□□□ -0.34
IRF3-221ENST00000598808 KRTAP17-1Q9BYP8 105 aa12.91□□□□□ -0.34
IRF3-221ENST00000598808 PCLOQ9Y6V0 5065 aa12.91□□□□□ -0.34
IRF3-221ENST00000598808 CHTF8P0CG12 524 aa12.91□□□□□ -0.34
IRF3-221ENST00000598808 PKIGQ9Y2B9 76 aa12.91□□□□□ -0.34
IRF3-221ENST00000598808 GAGE10A6NGK3 116 aa12.9□□□□□ -0.34
IRF3-221ENST00000598808 C2orf82Q6UX34 121 aa12.9□□□□□ -0.34
IRF3-221ENST00000598808 Q6ZSA8 131 aa12.9□□□□□ -0.34
IRF3-221ENST00000598808 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.9□□□□□ -0.34
IRF3-221ENST00000598808 K7EP34 96 aa12.89□□□□□ -0.35
IRF3-221ENST00000598808 UNQ6190/PRO20217Q6UXQ8 127 aa12.89□□□□□ -0.35
IRF3-221ENST00000598808 SCXQ7RTU7 201 aa12.89□□□□□ -0.35
IRF3-221ENST00000598808 ERG28Q9UKR5 140 aa12.89□□□□□ -0.35
IRF3-221ENST00000598808 F8WDY8 70 aa12.88□□□□□ -0.35
IRF3-221ENST00000598808 RPL18AQ02543 176 aaKnown RBP12.88□□□□□ -0.35
IRF3-221ENST00000598808 C10orf25Q5T742 122 aa12.88□□□□□ -0.35
IRF3-221ENST00000598808 LOC107984640A0A0U1RRK4 108 aa12.87□□□□□ -0.35
IRF3-221ENST00000598808 SMR3BP02814 79 aaPredicted RBP12.87□□□□□ -0.35
IRF3-221ENST00000598808 LINC00158P58513 81 aa12.87□□□□□ -0.35
IRF3-221ENST00000598808 SPCS1Q9Y6A9 102 aa12.87□□□□□ -0.35
IRF3-221ENST00000598808 DNAH8Q96JB1 4490 aa12.87□□□□□ -0.35
IRF3-221ENST00000598808 ABCA13Q86UQ4 5058 aa12.87□□□□□ -0.35
IRF3-221ENST00000598808 PANO1I0J062 215 aa12.86□□□□□ -0.35
IRF3-221ENST00000598808 TSPAN13O95857 204 aa12.86□□□□□ -0.35
IRF3-221ENST00000598808 GAGE2BQ13066 116 aa12.86□□□□□ -0.35
IRF3-221ENST00000598808 A0A096LNI7 61 aa12.85□□□□□ -0.35
IRF3-221ENST00000598808 MIR7-3HGQ8N6C7 128 aa12.85□□□□□ -0.35
IRF3-221ENST00000598808 DAND5Q8N907 189 aa12.85□□□□□ -0.35
IRF3-221ENST00000598808 CIRBP-AS1Q8TBR5 109 aa12.85□□□□□ -0.35
IRF3-221ENST00000598808 KRTAP4-5Q9BYR2 181 aa12.85□□□□□ -0.35
IRF3-221ENST00000598808 C6orf48Q9UBA6 75 aa12.85□□□□□ -0.35
IRF3-221ENST00000598808 LOC107984156A0A0G2JMH3 177 aa12.84□□□□□ -0.35
IRF3-221ENST00000598808 ARL17AQ8IVW1 177 aa12.84□□□□□ -0.35
IRF3-221ENST00000598808 NAA38Q9BRA0 125 aaKnown RBP12.84□□□□□ -0.35
IRF3-221ENST00000598808 SPACA4Q8TDM5 124 aa12.83□□□□□ -0.36
IRF3-221ENST00000598808 A0A0U1RRA0 63 aa12.82□□□□□ -0.36
IRF3-221ENST00000598808 NPC2P61916 151 aa12.82□□□□□ -0.36
IRF3-221ENST00000598808 RNF151Q2KHN1 245 aa12.82□□□□□ -0.36
IRF3-221ENST00000598808 SOSTDC1Q6X4U4 206 aa12.82□□□□□ -0.36
IRF3-221ENST00000598808 TRBV20-1A0A075B6N2 111 aa12.81□□□□□ -0.36
IRF3-221ENST00000598808 TRBV30A0A0K0K1B3 111 aa12.81□□□□□ -0.36
IRF3-221ENST00000598808 EIF4EBP3O60516 100 aaPredicted RBP12.81□□□□□ -0.36
IRF3-221ENST00000598808 LINC00474Q9P2X8 69 aa12.81□□□□□ -0.36
IRF3-221ENST00000598808 PFN2P35080 140 aa12.8□□□□□ -0.36
IRF3-221ENST00000598808 C9orf116Q5BN46 136 aaPredicted RBP12.8□□□□□ -0.36
IRF3-221ENST00000598808 TRAV13-2A0A0B4J235 113 aa12.79□□□□□ -0.36
IRF3-221ENST00000598808 GAGE2EQ4V326 116 aa12.79□□□□□ -0.36
IRF3-221ENST00000598808 GAGE2DQ9UEU5 116 aa12.79□□□□□ -0.36
IRF3-221ENST00000598808 A0A087WYN8 130 aa12.78□□□□□ -0.36
IRF3-221ENST00000598808 Q8N1X5 172 aa12.78□□□□□ -0.36
IRF3-221ENST00000598808 SND1-IT1Q9HBX3 110 aa12.78□□□□□ -0.36
IRF3-221ENST00000598808 Q1RN00 199 aa12.78□□□□□ -0.36
IRF3-221ENST00000598808 FAT1Q14517 4588 aa12.77□□□□□ -0.36
IRF3-221ENST00000598808 COX6CP09669 75 aa12.77□□□□□ -0.37
IRF3-221ENST00000598808 PSMB2P49721 201 aa12.77□□□□□ -0.37
IRF3-221ENST00000598808 LINC00528Q8N1L1 170 aa12.77□□□□□ -0.37
IRF3-221ENST00000598808 EPM2AB3EWF7 344 aa12.76□□□□□ -0.37
IRF3-221ENST00000598808 FAM229AH3BQW9 127 aa12.76□□□□□ -0.37
IRF3-221ENST00000598808 Q5VSD8 79 aa12.76□□□□□ -0.37
IRF3-221ENST00000598808 NDUFC2O95298 119 aa12.75□□□□□ -0.37
IRF3-221ENST00000598808 RPL13AP40429 203 aaKnown RBP12.75□□□□□ -0.37
IRF3-221ENST00000598808 Q6ZRP5 223 aa12.75□□□□□ -0.37
IRF3-221ENST00000598808 NDUFC2-KCTD14E9PQ53 114 aa12.74□□□□□ -0.37
IRF3-221ENST00000598808 SCGB1C2P0DMR2 95 aa12.74□□□□□ -0.37
IRF3-221ENST00000598808 TLX1NBP0CAT3 122 aa12.73□□□□□ -0.37
IRF3-221ENST00000598808 PLAC8Q9NZF1 115 aa12.72□□□□□ -0.37
IRF3-221ENST00000598808 F8W1H4 67 aa12.72□□□□□ -0.37
IRF3-221ENST00000598808 H7C2G1 150 aa12.72□□□□□ -0.37
IRF3-221ENST00000598808 VPS13BQ7Z7G8 4022 aa12.71□□□□□ -0.38
IRF3-221ENST00000598808 FAM19A5Q7Z5A7 132 aaPredicted RBP12.69□□□□□ -0.38
IRF3-221ENST00000598808 C7orf33Q8WU49 177 aa12.69□□□□□ -0.38
IRF3-221ENST00000598808 TRIAP1O43715 76 aa12.68□□□□□ -0.38
IRF3-221ENST00000598808 XAGE1AQ9HD64 81 aa12.68□□□□□ -0.38
IRF3-221ENST00000598808 IGKV2-28A0A075B6P5 120 aa12.67□□□□□ -0.38
IRF3-221ENST00000598808 H3BMG7 143 aa12.67□□□□□ -0.38
IRF3-221ENST00000598808 IGKV2D-28P01615 120 aa12.67□□□□□ -0.38
IRF3-221ENST00000598808 PLA2G1BP04054 148 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms