RNA–Protein interactions for RNA: ENST00000598553.1

VRK3-214, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 595 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-214ENST00000598553 NPSP0C0P6 89 aa6.53□□□□□ -1.36
VRK3-214ENST00000598553 KRTAP10-8P60410 259 aa6.53□□□□□ -1.36
VRK3-214ENST00000598553 VAMP3Q15836 100 aa6.53□□□□□ -1.36
VRK3-214ENST00000598553 PAPPA-AS1Q5QFB9 102 aa6.53□□□□□ -1.36
VRK3-214ENST00000598553 C2orf66Q6UXQ4 117 aa6.53□□□□□ -1.36
VRK3-214ENST00000598553 ERASQ7Z444 233 aa6.53□□□□□ -1.36
VRK3-214ENST00000598553 CYSLTR1Q9Y271 337 aa6.53□□□□□ -1.36
VRK3-214ENST00000598553 UBR4Q5T4S7 5183 aa6.52□□□□□ -1.37
VRK3-214ENST00000598553 IGIPA6NJ69 53 aa6.52□□□□□ -1.37
VRK3-214ENST00000598553 TLX1NBP0CAT3 122 aa6.52□□□□□ -1.37
VRK3-214ENST00000598553 TAL2Q16559 108 aa6.52□□□□□ -1.37
VRK3-214ENST00000598553 REG3GQ6UW15 175 aa6.52□□□□□ -1.37
VRK3-214ENST00000598553 AMELXQ99217 191 aa6.52□□□□□ -1.37
VRK3-214ENST00000598553 CHTOPQ9Y3Y2 248 aaKnown RBP6.52□□□□□ -1.37
VRK3-214ENST00000598553 GAGE2EQ4V326 116 aa6.51□□□□□ -1.37
VRK3-214ENST00000598553 C9orf129Q5T035 196 aaKnown RBP6.51□□□□□ -1.37
VRK3-214ENST00000598553 FAM19A5Q7Z5A7 132 aaPredicted RBP6.51□□□□□ -1.37
VRK3-214ENST00000598553 GAGE2DQ9UEU5 116 aa6.51□□□□□ -1.37
VRK3-214ENST00000598553 PCP2Q8IVA1 136 aa6.5□□□□□ -1.37
VRK3-214ENST00000598553 LINC01561Q8N1V8 128 aa6.5□□□□□ -1.37
VRK3-214ENST00000598553 TIMM17AQ99595 171 aa6.5□□□□□ -1.37
VRK3-214ENST00000598553 TP73-AS1Q9UF72 201 aa6.5□□□□□ -1.37
VRK3-214ENST00000598553 TRBV30A0A0K0K1B3 111 aa6.49□□□□□ -1.37
VRK3-214ENST00000598553 C9orf118A6NHY6 69 aa6.49□□□□□ -1.37
VRK3-214ENST00000598553 HERVK_113P61574 105 aa6.49□□□□□ -1.37
VRK3-214ENST00000598553 C1orf137Q5JT78 98 aa6.49□□□□□ -1.37
VRK3-214ENST00000598553 GTF2H5Q6ZYL4 71 aa6.49□□□□□ -1.37
VRK3-214ENST00000598553 FAM19A3Q7Z5A8 133 aa6.49□□□□□ -1.37
VRK3-214ENST00000598553 E9PLD3 99 aa6.48□□□□□ -1.37
VRK3-214ENST00000598553 SMIM13P0DJ93 91 aa6.48□□□□□ -1.37
VRK3-214ENST00000598553 PMVKQ15126 192 aa6.48□□□□□ -1.37
VRK3-214ENST00000598553 VCX2Q9H322 139 aa6.48□□□□□ -1.37
VRK3-214ENST00000598553 CDKN2A-AS1Q9UH64 79 aa6.48□□□□□ -1.37
VRK3-214ENST00000598553 IGKV2D-26A0A0A0MRZ7 120 aa6.47□□□□□ -1.37
VRK3-214ENST00000598553 MYMXA0A1B0GTQ4 84 aa6.47□□□□□ -1.37
VRK3-214ENST00000598553 CEND1Q8N111 149 aa6.47□□□□□ -1.37
VRK3-214ENST00000598553 TOMM7Q9P0U1 55 aa6.47□□□□□ -1.37
VRK3-214ENST00000598553 GAGE10A6NGK3 116 aa6.46□□□□□ -1.38
VRK3-214ENST00000598553 NDUFC2-KCTD14E9PQ53 114 aa6.46□□□□□ -1.38
VRK3-214ENST00000598553 IGLV7-43P04211 117 aa6.46□□□□□ -1.38
VRK3-214ENST00000598553 Q6ZVH6 145 aa6.46□□□□□ -1.38
VRK3-214ENST00000598553 C11orf86A6NJI1 115 aa6.45□□□□□ -1.38
VRK3-214ENST00000598553 M0QXV9 152 aa6.45□□□□□ -1.38
VRK3-214ENST00000598553 PRSS2P07478 247 aa6.45□□□□□ -1.38
VRK3-214ENST00000598553 HERVK_113P63121 156 aa6.45□□□□□ -1.38
VRK3-214ENST00000598553 Q8IZM0 81 aa6.45□□□□□ -1.38
VRK3-214ENST00000598553 PRR26Q8N8Z3 221 aa6.45□□□□□ -1.38
VRK3-214ENST00000598553 CST9LQ9H4G1 147 aa6.45□□□□□ -1.38
VRK3-214ENST00000598553 XAGE1AQ9HD64 81 aa6.45□□□□□ -1.38
VRK3-214ENST00000598553 LRP2P98164 4655 aa6.44□□□□□ -1.38
VRK3-214ENST00000598553 KRTAP1-4P0C5Y4 121 aa6.44□□□□□ -1.38
VRK3-214ENST00000598553 FABP2P12104 132 aa6.44□□□□□ -1.38
VRK3-214ENST00000598553 CKS1BP61024 79 aa6.44□□□□□ -1.38
VRK3-214ENST00000598553 HIST1H4GQ99525 98 aa6.44□□□□□ -1.38
VRK3-214ENST00000598553 CBY1Q9Y3M2 126 aa6.44□□□□□ -1.38
VRK3-214ENST00000598553 TMEM238LA0A1B0GVL6 79 aa6.43□□□□□ -1.38
VRK3-214ENST00000598553 A0A1W2PPM0 123 aa6.43□□□□□ -1.38
VRK3-214ENST00000598553 A6NJY4 79 aa6.43□□□□□ -1.38
VRK3-214ENST00000598553 SMIM1B2RUZ4 78 aa6.43□□□□□ -1.38
VRK3-214ENST00000598553 H3BUT2 72 aa6.43□□□□□ -1.38
VRK3-214ENST00000598553 K7EP34 96 aa6.43□□□□□ -1.38
VRK3-214ENST00000598553 C6orf226Q5I0X4 101 aa6.43□□□□□ -1.38
VRK3-214ENST00000598553 DIRC1Q969H9 104 aa6.43□□□□□ -1.38
VRK3-214ENST00000598553 GEMIN7Q9H840 131 aaKnown RBP6.43□□□□□ -1.38
VRK3-214ENST00000598553 UBE2BP63146 152 aa6.42□□□□□ -1.38
VRK3-214ENST00000598553 ZNF815PA8K554 130 aa6.41□□□□□ -1.38
VRK3-214ENST00000598553 H0Y9J4 135 aa6.41□□□□□ -1.38
VRK3-214ENST00000598553 SPINK8P0C7L1 97 aa6.41□□□□□ -1.38
VRK3-214ENST00000598553 CXCL5P42830 114 aa6.41□□□□□ -1.38
VRK3-214ENST00000598553 FXYD2P54710 66 aa6.41□□□□□ -1.38
VRK3-214ENST00000598553 SCGB1D4Q6XE38 83 aa6.41□□□□□ -1.38
VRK3-214ENST00000598553 TTTY13Q9BZ97 58 aa6.41□□□□□ -1.38
VRK3-214ENST00000598553 IGLV5-45A0A087WSX0 123 aa6.4□□□□□ -1.38
VRK3-214ENST00000598553 TINCRA0A1B0GVN0 87 aa6.4□□□□□ -1.38
VRK3-214ENST00000598553 A0A1B0GWB2 263 aa6.4□□□□□ -1.38
VRK3-214ENST00000598553 TMEM170BQ5T4T1 132 aa6.4□□□□□ -1.38
VRK3-214ENST00000598553 RAB37Q96AX2 223 aa6.4□□□□□ -1.38
VRK3-214ENST00000598553 PLEKHB2Q96CS7 222 aa6.4□□□□□ -1.38
VRK3-214ENST00000598553 SPANXB1Q9NS25 103 aaPredicted RBP6.4□□□□□ -1.38
VRK3-214ENST00000598553 NHP2Q9NX24 153 aaKnown RBP6.4□□□□□ -1.38
VRK3-214ENST00000598553 SPCS1Q9Y6A9 102 aa6.4□□□□□ -1.38
VRK3-214ENST00000598553 LPAP08519 4548 aa6.39□□□□□ -1.39
VRK3-214ENST00000598553 LEPROTO15243 131 aa6.39□□□□□ -1.39
VRK3-214ENST00000598553 LGALS3P17931 250 aaKnown RBP6.39□□□□□ -1.39
VRK3-214ENST00000598553 C22orf24Q9Y442 160 aa6.39□□□□□ -1.39
VRK3-214ENST00000598553 K7ERU9 68 aa6.38□□□□□ -1.39
VRK3-214ENST00000598553 LYRM7Q5U5X0 104 aa6.38□□□□□ -1.39
VRK3-214ENST00000598553 COX7B2Q8TF08 81 aa6.38□□□□□ -1.39
VRK3-214ENST00000598553 TMEM223A0PJW6 202 aa6.37□□□□□ -1.39
VRK3-214ENST00000598553 J3QQQ9 107 aa6.37□□□□□ -1.39
VRK3-214ENST00000598553 OCIAD2Q56VL3 154 aa6.37□□□□□ -1.39
VRK3-214ENST00000598553 Q8NDZ9 215 aa6.36□□□□□ -1.39
VRK3-214ENST00000598553 IGLV1-50A0A075B6I6 118 aa6.35□□□□□ -1.39
VRK3-214ENST00000598553 RPL37AP8A6NKH3 93 aa6.35□□□□□ -1.39
VRK3-214ENST00000598553 K7ERJ3 54 aa6.35□□□□□ -1.39
VRK3-214ENST00000598553 ZNF22P17026 224 aaPredicted RBP6.35□□□□□ -1.39
VRK3-214ENST00000598553 MRPL55Q7Z7F7 128 aaKnown RBP6.35□□□□□ -1.39
VRK3-214ENST00000598553 TMEM238C9JI98 176 aa6.34□□□□□ -1.39
VRK3-214ENST00000598553 F8W1H4 67 aa6.34□□□□□ -1.39
VRK3-214ENST00000598553 ZNF861PO60384 105 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms