RNA–Protein interactions for RNA: ENST00000596379.1

LINC02560-201, Transcript of long intergenic non-protein coding RNA 2560, humanhuman

BASIC

Gene LINC02560, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02560-201ENST00000596379 SPAG11AQ6PDA7 123 aa9.09□□□□□ -0.95
LINC02560-201ENST00000596379 SPRR4Q96PI1 79 aa9.09□□□□□ -0.95
LINC02560-201ENST00000596379 SEC11CQ9BY50 192 aa9.09□□□□□ -0.95
LINC02560-201ENST00000596379 C11orf86A6NJI1 115 aa9.08□□□□□ -0.96
LINC02560-201ENST00000596379 LINC00614P0C842 121 aa9.08□□□□□ -0.96
LINC02560-201ENST00000596379 PMCHL1Q16048 86 aa9.08□□□□□ -0.96
LINC02560-201ENST00000596379 TMEM170BQ5T4T1 132 aa9.08□□□□□ -0.96
LINC02560-201ENST00000596379 BAGE3Q86Y29 109 aa9.08□□□□□ -0.96
LINC02560-201ENST00000596379 HBDP02042 147 aa9.07□□□□□ -0.96
LINC02560-201ENST00000596379 LINC00158P58513 81 aa9.07□□□□□ -0.96
LINC02560-201ENST00000596379 SFTA2Q6UW10 78 aa9.07□□□□□ -0.96
LINC02560-201ENST00000596379 A0A0U1RRA0 63 aa9.06□□□□□ -0.96
LINC02560-201ENST00000596379 C4orf48Q5BLP8 95 aa9.06□□□□□ -0.96
LINC02560-201ENST00000596379 C18orf32Q8TCD1 76 aa9.06□□□□□ -0.96
LINC02560-201ENST00000596379 KRTAP9-6A0A140TA67 174 aa9.04□□□□□ -0.96
LINC02560-201ENST00000596379 FP248Q71RG6 208 aaPredicted RBP9.04□□□□□ -0.96
LINC02560-201ENST00000596379 DAND5Q8N907 189 aa9.04□□□□□ -0.96
LINC02560-201ENST00000596379 RPS10P5Q9NQ39 176 aa9.04□□□□□ -0.96
LINC02560-201ENST00000596379 TRAPPC1Q9Y5R8 145 aa9.04□□□□□ -0.96
LINC02560-201ENST00000596379 ZNF706Q9Y5V0 76 aaPredicted RBP9.04□□□□□ -0.96
LINC02560-201ENST00000596379 LINC00337Q8N6G1 96 aa9.03□□□□□ -0.96
LINC02560-201ENST00000596379 Q8NBF4 154 aa9.02□□□□□ -0.97
LINC02560-201ENST00000596379 CHTOPQ9Y3Y2 248 aaKnown RBP9.02□□□□□ -0.97
LINC02560-201ENST00000596379 PRYO14603 147 aa9.01□□□□□ -0.97
LINC02560-201ENST00000596379 IFITM2Q01629 132 aa9.01□□□□□ -0.97
LINC02560-201ENST00000596379 SMCR5Q8TEV8 140 aa9.01□□□□□ -0.97
LINC02560-201ENST00000596379 TMEM223A0PJW6 202 aa9□□□□□ -0.97
LINC02560-201ENST00000596379 ATP6V1G1O75348 118 aa9□□□□□ -0.97
LINC02560-201ENST00000596379 SMIM13P0DJ93 91 aa9□□□□□ -0.97
LINC02560-201ENST00000596379 RHEBQ15382 184 aa9□□□□□ -0.97
LINC02560-201ENST00000596379 KRTAP13-3Q3SY46 172 aa9□□□□□ -0.97
LINC02560-201ENST00000596379 C10orf91Q5T1B1 145 aa9□□□□□ -0.97
LINC02560-201ENST00000596379 BOD1L2Q8IYS8 172 aa9□□□□□ -0.97
LINC02560-201ENST00000596379 KCNQ1DNQ9H478 68 aa8.99□□□□□ -0.97
LINC02560-201ENST00000596379 NCR3O14931 201 aa8.98□□□□□ -0.97
LINC02560-201ENST00000596379 SPRR1AP35321 89 aa8.98□□□□□ -0.97
LINC02560-201ENST00000596379 ASB16-AS1Q495Z4 193 aa8.98□□□□□ -0.97
LINC02560-201ENST00000596379 COMMD7Q86VX2 200 aa8.98□□□□□ -0.97
LINC02560-201ENST00000596379 KRTAP4-16G5E9R7 235 aaPredicted RBP8.97□□□□□ -0.97
LINC02560-201ENST00000596379 SPINK1P00995 79 aa8.97□□□□□ -0.97
LINC02560-201ENST00000596379 MEIG1Q5JSS6 88 aa8.97□□□□□ -0.97
LINC02560-201ENST00000596379 MIR7-3HGQ8N6C7 128 aa8.97□□□□□ -0.97
LINC02560-201ENST00000596379 ETDCA0A1B0GVM5 59 aa8.96□□□□□ -0.98
LINC02560-201ENST00000596379 TRAV12-1A0A0B4J245 112 aa8.95□□□□□ -0.98
LINC02560-201ENST00000596379 TRBV10-3A0A0K0K1G6 114 aa8.95□□□□□ -0.98
LINC02560-201ENST00000596379 LINC00483Q53H64 154 aa8.95□□□□□ -0.98
LINC02560-201ENST00000596379 GAGE2AQ6NT46 116 aa8.95□□□□□ -0.98
LINC02560-201ENST00000596379 IFI27L1Q96BM0 104 aa8.94□□□□□ -0.98
LINC02560-201ENST00000596379 KRTAP4-1Q9BYQ7 146 aa8.94□□□□□ -0.98
LINC02560-201ENST00000596379 HERV-K104P63124 156 aa8.93□□□□□ -0.98
LINC02560-201ENST00000596379 LINC01547P58512 204 aaPredicted RBP8.92□□□□□ -0.98
LINC02560-201ENST00000596379 LINC00587B1AMM8 73 aa8.91□□□□□ -0.98
LINC02560-201ENST00000596379 B5MCH6 92 aa8.91□□□□□ -0.98
LINC02560-201ENST00000596379 ERC2-IT1O76042 136 aa8.91□□□□□ -0.98
LINC02560-201ENST00000596379 SEC61BP60468 96 aaKnown RBP8.91□□□□□ -0.98
LINC02560-201ENST00000596379 MOBPQ13875 183 aa8.91□□□□□ -0.98
LINC02560-201ENST00000596379 NDUFA12Q9UI09 145 aa8.91□□□□□ -0.98
LINC02560-201ENST00000596379 IGLV9-49A0A0B4J1Y8 123 aa8.9□□□□□ -0.98
LINC02560-201ENST00000596379 S100A12P80511 92 aa8.9□□□□□ -0.98
LINC02560-201ENST00000596379 SSBP3-AS1Q7Z2R9 100 aa8.9□□□□□ -0.98
LINC02560-201ENST00000596379 CHCHD1Q96BP2 118 aaKnown RBP8.9□□□□□ -0.98
LINC02560-201ENST00000596379 MYMXA0A1B0GTQ4 84 aa8.89□□□□□ -0.99
LINC02560-201ENST00000596379 Q8N377 158 aa8.89□□□□□ -0.99
LINC02560-201ENST00000596379 MAP1LC3CQ9BXW4 147 aa8.89□□□□□ -0.99
LINC02560-201ENST00000596379 RPS29P62273 56 aaKnown RBP8.88□□□□□ -0.99
LINC02560-201ENST00000596379 DDTP30046 118 aa8.87□□□□□ -0.99
LINC02560-201ENST00000596379 LOC107984156A0A0G2JMH3 177 aa8.86□□□□□ -0.99
LINC02560-201ENST00000596379 SLC25A20O43772 301 aa8.86□□□□□ -0.99
LINC02560-201ENST00000596379 APOC3P02656 99 aa8.86□□□□□ -0.99
LINC02560-201ENST00000596379 ARL17AQ8IVW1 177 aa8.86□□□□□ -0.99
LINC02560-201ENST00000596379 FAM19A2Q8N3H0 131 aa8.86□□□□□ -0.99
LINC02560-201ENST00000596379 Q9BRP9 147 aa8.86□□□□□ -0.99
LINC02560-201ENST00000596379 TRBV10-2A0A0K0K1G8 114 aa8.84□□□□□ -0.99
LINC02560-201ENST00000596379 H0Y8G0 127 aa8.84□□□□□ -0.99
LINC02560-201ENST00000596379 TSPEAR-AS2P59090 65 aa8.84□□□□□ -0.99
LINC02560-201ENST00000596379 Q6ZRX8 168 aa8.84□□□□□ -0.99
LINC02560-201ENST00000596379 LEPROTO15243 131 aa8.83□□□□□ -1
LINC02560-201ENST00000596379 HSBP1O75506 76 aa8.83□□□□□ -1
LINC02560-201ENST00000596379 SNAPINO95295 136 aa8.83□□□□□ -1
LINC02560-201ENST00000596379 XP32Q5T750 250 aa8.82□□□□□ -1
LINC02560-201ENST00000596379 LCE2DQ5TA82 110 aaPredicted RBP8.82□□□□□ -1
LINC02560-201ENST00000596379 YPEL4Q96NS1 127 aa8.82□□□□□ -1
LINC02560-201ENST00000596379 SVBPQ8N300 66 aa8.81□□□□□ -1
LINC02560-201ENST00000596379 SPANXB1Q9NS25 103 aaPredicted RBP8.81□□□□□ -1
LINC02560-201ENST00000596379 S100A7L2Q5SY68 101 aa8.8□□□□□ -1
LINC02560-201ENST00000596379 C9orf153Q5TBE3 101 aa8.8□□□□□ -1
LINC02560-201ENST00000596379 J3QQQ9 107 aa8.79□□□□□ -1
LINC02560-201ENST00000596379 IGLV6-57P01721 117 aa8.79□□□□□ -1
LINC02560-201ENST00000596379 NDUFA5Q16718 116 aa8.79□□□□□ -1
LINC02560-201ENST00000596379 MIEN1Q9BRT3 115 aa8.79□□□□□ -1
LINC02560-201ENST00000596379 JOSD1Q15040 202 aaPredicted RBP8.78□□□□□ -1
LINC02560-201ENST00000596379 TRAV23DV6A0A075B6W5 121 aa8.77□□□□□ -1.01
LINC02560-201ENST00000596379 LEPROTL1O95214 131 aa8.77□□□□□ -1.01
LINC02560-201ENST00000596379 NDUFC2O95298 119 aa8.77□□□□□ -1.01
LINC02560-201ENST00000596379 ST20-AS1Q8NBB2 130 aa8.77□□□□□ -1.01
LINC02560-201ENST00000596379 PLNP26678 52 aa8.76□□□□□ -1.01
LINC02560-201ENST00000596379 NMUP48645 174 aa8.76□□□□□ -1.01
LINC02560-201ENST00000596379 ZNF73O43830 326 aaPredicted RBP8.75□□□□□ -1.01
LINC02560-201ENST00000596379 LGALS3P17931 250 aaKnown RBP8.75□□□□□ -1.01
LINC02560-201ENST00000596379 HERVK_113P61574 105 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms