RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 SCO1O75880 301 aa7.79□□□□□ -1.16
USE1-207ENST00000596136 LINC00158P58513 81 aa7.79□□□□□ -1.16
USE1-207ENST00000596136 HERV-K104P63124 156 aa7.79□□□□□ -1.16
USE1-207ENST00000596136 PLNP26678 52 aa7.78□□□□□ -1.16
USE1-207ENST00000596136 RPL13AP40429 203 aaKnown RBP7.78□□□□□ -1.16
USE1-207ENST00000596136 IGKV2-28A0A075B6P5 120 aa7.77□□□□□ -1.17
USE1-207ENST00000596136 LINC00587B1AMM8 73 aa7.77□□□□□ -1.17
USE1-207ENST00000596136 H0Y8G0 127 aa7.77□□□□□ -1.17
USE1-207ENST00000596136 IGKV2D-28P01615 120 aa7.77□□□□□ -1.17
USE1-207ENST00000596136 FABP4P15090 132 aa7.77□□□□□ -1.17
USE1-207ENST00000596136 NDUFA12Q9UI09 145 aa7.77□□□□□ -1.17
USE1-207ENST00000596136 MYMXA0A1B0GTQ4 84 aa7.76□□□□□ -1.17
USE1-207ENST00000596136 LEPROTO15243 131 aa7.76□□□□□ -1.17
USE1-207ENST00000596136 SMIM13P0DJ93 91 aa7.76□□□□□ -1.17
USE1-207ENST00000596136 TMEM126AQ9H061 195 aa7.76□□□□□ -1.17
USE1-207ENST00000596136 M0R378 163 aa7.75□□□□□ -1.17
USE1-207ENST00000596136 HIST1H2BKO60814 126 aa7.75□□□□□ -1.17
USE1-207ENST00000596136 DPM2O94777 84 aa7.75□□□□□ -1.17
USE1-207ENST00000596136 HIST1H2BJP06899 126 aa7.75□□□□□ -1.17
USE1-207ENST00000596136 HIST1H2BOP23527 126 aa7.75□□□□□ -1.17
USE1-207ENST00000596136 HIST1H2BBP33778 126 aa7.75□□□□□ -1.17
USE1-207ENST00000596136 HIST1H2BDP58876 126 aa7.75□□□□□ -1.17
USE1-207ENST00000596136 TSPEAR-AS2P59090 65 aa7.75□□□□□ -1.17
USE1-207ENST00000596136 HIST1H2BCP62807 126 aa7.75□□□□□ -1.17
USE1-207ENST00000596136 HIST2H2BEQ16778 126 aa7.75□□□□□ -1.17
USE1-207ENST00000596136 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.75□□□□□ -1.17
USE1-207ENST00000596136 HIST1H2BHQ93079 126 aa7.75□□□□□ -1.17
USE1-207ENST00000596136 PLEKHB2Q96CS7 222 aa7.75□□□□□ -1.17
USE1-207ENST00000596136 HIST1H2BNQ99877 126 aa7.75□□□□□ -1.17
USE1-207ENST00000596136 HIST1H2BMQ99879 126 aa7.75□□□□□ -1.17
USE1-207ENST00000596136 LOC107984156A0A0G2JMH3 177 aa7.74□□□□□ -1.17
USE1-207ENST00000596136 A0A0U1RRA0 63 aa7.74□□□□□ -1.17
USE1-207ENST00000596136 IGKCP01834 107 aa7.74□□□□□ -1.17
USE1-207ENST00000596136 UBE2AP49459 152 aa7.74□□□□□ -1.17
USE1-207ENST00000596136 MEIG1Q5JSS6 88 aa7.74□□□□□ -1.17
USE1-207ENST00000596136 ARL17AQ8IVW1 177 aa7.74□□□□□ -1.17
USE1-207ENST00000596136 MIR7-3HGQ8N6C7 128 aa7.74□□□□□ -1.17
USE1-207ENST00000596136 TMEM238C9JI98 176 aa7.73□□□□□ -1.17
USE1-207ENST00000596136 J3QQQ9 107 aa7.73□□□□□ -1.17
USE1-207ENST00000596136 PMCHL2Q9BQD1 86 aa7.73□□□□□ -1.17
USE1-207ENST00000596136 MAP1LC3CQ9BXW4 147 aa7.73□□□□□ -1.17
USE1-207ENST00000596136 A0A087X002 238 aa7.72□□□□□ -1.17
USE1-207ENST00000596136 ATP6V1G1O75348 118 aa7.72□□□□□ -1.17
USE1-207ENST00000596136 NMUP48645 174 aa7.72□□□□□ -1.17
USE1-207ENST00000596136 IGKV2D-26A0A0A0MRZ7 120 aa7.71□□□□□ -1.18
USE1-207ENST00000596136 CRYGAP11844 174 aa7.71□□□□□ -1.18
USE1-207ENST00000596136 HERVK_113P61574 105 aa7.71□□□□□ -1.18
USE1-207ENST00000596136 FAM19A1Q7Z5A9 133 aa7.71□□□□□ -1.18
USE1-207ENST00000596136 BOD1L2Q8IYS8 172 aa7.71□□□□□ -1.18
USE1-207ENST00000596136 PRLHP81277 87 aa7.7□□□□□ -1.18
USE1-207ENST00000596136 FAM229BQ4G0N7 80 aa7.7□□□□□ -1.18
USE1-207ENST00000596136 COA6Q5JTJ3 125 aaKnown RBP7.7□□□□□ -1.18
USE1-207ENST00000596136 SYS1-DBNDD2H3BUS1 97 aa7.69□□□□□ -1.18
USE1-207ENST00000596136 SPRR1AP35321 89 aa7.69□□□□□ -1.18
USE1-207ENST00000596136 KCNQ1DNQ9H478 68 aa7.69□□□□□ -1.18
USE1-207ENST00000596136 RNF213Q63HN8 5207 aa7.69□□□□□ -1.18
USE1-207ENST00000596136 E9PLD3 99 aa7.68□□□□□ -1.18
USE1-207ENST00000596136 PRYO14603 147 aa7.68□□□□□ -1.18
USE1-207ENST00000596136 KRTAP13-2Q52LG2 175 aa7.68□□□□□ -1.18
USE1-207ENST00000596136 LINC01545Q5VT33 79 aa7.68□□□□□ -1.18
USE1-207ENST00000596136 ANAPC11Q9NYG5 84 aa7.68□□□□□ -1.18
USE1-207ENST00000596136 LGALS3P17931 250 aaKnown RBP7.67□□□□□ -1.18
USE1-207ENST00000596136 PET117Q6UWS5 81 aa7.67□□□□□ -1.18
USE1-207ENST00000596136 LPAP08519 4548 aa7.66□□□□□ -1.18
USE1-207ENST00000596136 TRBV10-2A0A0K0K1G8 114 aa7.66□□□□□ -1.18
USE1-207ENST00000596136 KRTAP4-16G5E9R7 235 aaPredicted RBP7.66□□□□□ -1.18
USE1-207ENST00000596136 NCR3O14931 201 aa7.66□□□□□ -1.18
USE1-207ENST00000596136 LINC00337Q8N6G1 96 aa7.66□□□□□ -1.18
USE1-207ENST00000596136 DAND5Q8N907 189 aa7.66□□□□□ -1.18
USE1-207ENST00000596136 TYMSOSQ8TAI1 123 aa7.66□□□□□ -1.18
USE1-207ENST00000596136 NDUFC2O95298 119 aa7.65□□□□□ -1.18
USE1-207ENST00000596136 A0A0J9YXY3 114 aa7.64□□□□□ -1.19
USE1-207ENST00000596136 TRBV10-3A0A0K0K1G6 114 aa7.64□□□□□ -1.19
USE1-207ENST00000596136 C3orf79P0CE67 100 aa7.63□□□□□ -1.19
USE1-207ENST00000596136 ADAMTSL4-AS1Q5T5F5 129 aa7.63□□□□□ -1.19
USE1-207ENST00000596136 SPRR4Q96PI1 79 aa7.62□□□□□ -1.19
USE1-207ENST00000596136 HIGD2AQ9BW72 106 aa7.62□□□□□ -1.19
USE1-207ENST00000596136 SPANXB1Q9NS25 103 aaPredicted RBP7.62□□□□□ -1.19
USE1-207ENST00000596136 EIF4EBP3O60516 100 aaPredicted RBP7.61□□□□□ -1.19
USE1-207ENST00000596136 IGLV6-57P01721 117 aa7.61□□□□□ -1.19
USE1-207ENST00000596136 CTAG1AP78358 180 aa7.61□□□□□ -1.19
USE1-207ENST00000596136 SOSTDC1Q6X4U4 206 aa7.61□□□□□ -1.19
USE1-207ENST00000596136 LITAFQ99732 161 aa7.61□□□□□ -1.19
USE1-207ENST00000596136 MIEN1Q9BRT3 115 aa7.61□□□□□ -1.19
USE1-207ENST00000596136 ETDCA0A1B0GVM5 59 aa7.6□□□□□ -1.19
USE1-207ENST00000596136 TIMM17BO60830 172 aa7.6□□□□□ -1.19
USE1-207ENST00000596136 DDTP30046 118 aa7.6□□□□□ -1.19
USE1-207ENST00000596136 B5MCH6 92 aa7.59□□□□□ -1.19
USE1-207ENST00000596136 TSPAN13O95857 204 aa7.59□□□□□ -1.19
USE1-207ENST00000596136 S100A12P80511 92 aa7.59□□□□□ -1.19
USE1-207ENST00000596136 SMCR5Q8TEV8 140 aa7.59□□□□□ -1.19
USE1-207ENST00000596136 ZNF706Q9Y5V0 76 aaPredicted RBP7.59□□□□□ -1.19
USE1-207ENST00000596136 LINC00304Q8N9R0 145 aa7.58□□□□□ -1.2
USE1-207ENST00000596136 KRTDAPP60985 99 aa7.57□□□□□ -1.2
USE1-207ENST00000596136 PRR4Q16378 134 aa7.57□□□□□ -1.2
USE1-207ENST00000596136 C3orf22Q8N5N4 141 aa7.57□□□□□ -1.2
USE1-207ENST00000596136 ZNF815PA8K554 130 aa7.56□□□□□ -1.2
USE1-207ENST00000596136 LINC00483Q53H64 154 aa7.56□□□□□ -1.2
USE1-207ENST00000596136 S100A7L2Q5SY68 101 aa7.56□□□□□ -1.2
USE1-207ENST00000596136 LINC00308Q8TCZ7 52 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms