RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 RNF151Q2KHN1 245 aa12.35□□□□□ -0.43
PNKP-207ENST00000596014 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.35□□□□□ -0.43
PNKP-207ENST00000596014 HERC2O95714 4834 aa12.35□□□□□ -0.43
PNKP-207ENST00000596014 PANO1I0J062 215 aa12.35□□□□□ -0.43
PNKP-207ENST00000596014 CKS1BP61024 79 aa12.35□□□□□ -0.43
PNKP-207ENST00000596014 COX7B2Q8TF08 81 aa12.34□□□□□ -0.43
PNKP-207ENST00000596014 C6orf48Q9UBA6 75 aa12.34□□□□□ -0.43
PNKP-207ENST00000596014 CHTF8P0CG12 524 aa12.33□□□□□ -0.44
PNKP-207ENST00000596014 LITAFQ99732 161 aa12.33□□□□□ -0.44
PNKP-207ENST00000596014 PKIGQ9Y2B9 76 aa12.33□□□□□ -0.44
PNKP-207ENST00000596014 K7EP34 96 aa12.32□□□□□ -0.44
PNKP-207ENST00000596014 CIRBPQ14011 172 aaKnown RBP12.32□□□□□ -0.44
PNKP-207ENST00000596014 SCXQ7RTU7 201 aa12.32□□□□□ -0.44
PNKP-207ENST00000596014 A0A096LNI7 61 aa12.32□□□□□ -0.44
PNKP-207ENST00000596014 LOC107984640A0A0U1RRK4 108 aa12.32□□□□□ -0.44
PNKP-207ENST00000596014 CIRBP-AS1Q8TBR5 109 aa12.32□□□□□ -0.44
PNKP-207ENST00000596014 SPANXDQ9BXN6 97 aa12.32□□□□□ -0.44
PNKP-207ENST00000596014 SPANXCQ9NY87 97 aa12.32□□□□□ -0.44
PNKP-207ENST00000596014 IGKV2-24A0A0C4DH68 120 aa12.31□□□□□ -0.44
PNKP-207ENST00000596014 TRBV30A0A0K0K1B3 111 aa12.31□□□□□ -0.44
PNKP-207ENST00000596014 FABP2P12104 132 aa12.31□□□□□ -0.44
PNKP-207ENST00000596014 FAT1Q14517 4588 aa12.3□□□□□ -0.44
PNKP-207ENST00000596014 TIMM17BO60830 172 aa12.3□□□□□ -0.44
PNKP-207ENST00000596014 CXCL5P42830 114 aa12.3□□□□□ -0.44
PNKP-207ENST00000596014 GTF2H5Q6ZYL4 71 aa12.3□□□□□ -0.44
PNKP-207ENST00000596014 SPACA4Q8TDM5 124 aa12.3□□□□□ -0.44
PNKP-207ENST00000596014 DPH3Q96FX2 82 aa12.3□□□□□ -0.44
PNKP-207ENST00000596014 SPCS1Q9Y6A9 102 aa12.29□□□□□ -0.44
PNKP-207ENST00000596014 GAGE10A6NGK3 116 aa12.29□□□□□ -0.44
PNKP-207ENST00000596014 RPL24P83731 157 aaKnown RBP12.28□□□□□ -0.44
PNKP-207ENST00000596014 GAGE2BQ13066 116 aa12.28□□□□□ -0.44
PNKP-207ENST00000596014 C9orf116Q5BN46 136 aaPredicted RBP12.28□□□□□ -0.44
PNKP-207ENST00000596014 KRTAP17-1Q9BYP8 105 aa12.28□□□□□ -0.44
PNKP-207ENST00000596014 TLX1NBP0CAT3 122 aa12.27□□□□□ -0.45
PNKP-207ENST00000596014 RPL18AQ02543 176 aaKnown RBP12.27□□□□□ -0.45
PNKP-207ENST00000596014 MUSTN1Q8IVN3 82 aa12.27□□□□□ -0.45
PNKP-207ENST00000596014 LINC00474Q9P2X8 69 aa12.27□□□□□ -0.45
PNKP-207ENST00000596014 A4D1N5 150 aa12.26□□□□□ -0.45
PNKP-207ENST00000596014 SMR3BP02814 79 aaPredicted RBP12.26□□□□□ -0.45
PNKP-207ENST00000596014 A0A087WYN8 130 aa12.26□□□□□ -0.45
PNKP-207ENST00000596014 ZNF625Q96I27 306 aaPredicted RBP12.26□□□□□ -0.45
PNKP-207ENST00000596014 TSPAN13O95857 204 aa12.25□□□□□ -0.45
PNKP-207ENST00000596014 CFC1BP0CG36 223 aa12.25□□□□□ -0.45
PNKP-207ENST00000596014 CFC1P0CG37 223 aa12.25□□□□□ -0.45
PNKP-207ENST00000596014 ADAMTSL4-AS1Q5T5F5 129 aa12.25□□□□□ -0.45
PNKP-207ENST00000596014 Q6ZRP5 223 aa12.25□□□□□ -0.45
PNKP-207ENST00000596014 A0A0B4J2C4 111 aa12.24□□□□□ -0.45
PNKP-207ENST00000596014 NDUFC2-KCTD14E9PQ53 114 aa12.24□□□□□ -0.45
PNKP-207ENST00000596014 Q8N1X5 172 aa12.24□□□□□ -0.45
PNKP-207ENST00000596014 HERV-K104P63124 156 aa12.23□□□□□ -0.45
PNKP-207ENST00000596014 PLAC8Q9NZF1 115 aa12.23□□□□□ -0.45
PNKP-207ENST00000596014 EIF4EBP3O60516 100 aaPredicted RBP12.22□□□□□ -0.45
PNKP-207ENST00000596014 GAGE2EQ4V326 116 aa12.22□□□□□ -0.45
PNKP-207ENST00000596014 GAGE2DQ9UEU5 116 aa12.22□□□□□ -0.45
PNKP-207ENST00000596014 IFITM1P13164 125 aa12.21□□□□□ -0.45
PNKP-207ENST00000596014 MEIG1Q5JSS6 88 aa12.2□□□□□ -0.46
PNKP-207ENST00000596014 PRO1854Q9UHT4 67 aa12.2□□□□□ -0.46
PNKP-207ENST00000596014 NPC2P61916 151 aa12.19□□□□□ -0.46
PNKP-207ENST00000596014 SFTA2Q6UW10 78 aa12.19□□□□□ -0.46
PNKP-207ENST00000596014 DAND5Q8N907 189 aa12.18□□□□□ -0.46
PNKP-207ENST00000596014 A0A1W2PNN7 141 aa12.17□□□□□ -0.46
PNKP-207ENST00000596014 LINC00528Q8N1L1 170 aa12.17□□□□□ -0.46
PNKP-207ENST00000596014 FAM229AH3BQW9 127 aa12.16□□□□□ -0.46
PNKP-207ENST00000596014 LYRM7Q5U5X0 104 aa12.16□□□□□ -0.46
PNKP-207ENST00000596014 VPS13BQ7Z7G8 4022 aa12.16□□□□□ -0.46
PNKP-207ENST00000596014 EPM2AB3EWF7 344 aa12.16□□□□□ -0.46
PNKP-207ENST00000596014 LINC00308Q8TCZ7 52 aa12.16□□□□□ -0.46
PNKP-207ENST00000596014 C9orf129Q5T035 196 aaKnown RBP12.15□□□□□ -0.46
PNKP-207ENST00000596014 Q5VSD8 79 aa12.15□□□□□ -0.46
PNKP-207ENST00000596014 COPS9Q8WXC6 57 aa12.15□□□□□ -0.46
PNKP-207ENST00000596014 KRTAP4-5Q9BYR2 181 aa12.15□□□□□ -0.46
PNKP-207ENST00000596014 ERG28Q9UKR5 140 aa12.15□□□□□ -0.46
PNKP-207ENST00000596014 SRRM2Q9UQ35 2752 aaKnown RBP12.15□□□□□ -0.47
PNKP-207ENST00000596014 PFN2P35080 140 aa12.14□□□□□ -0.47
PNKP-207ENST00000596014 XAGE1AQ9HD64 81 aa12.14□□□□□ -0.47
PNKP-207ENST00000596014 A0A0U1RRA0 63 aa12.13□□□□□ -0.47
PNKP-207ENST00000596014 FAM168BA1KXE4 195 aa12.13□□□□□ -0.47
PNKP-207ENST00000596014 PPDPFQ9H3Y8 114 aa12.13□□□□□ -0.47
PNKP-207ENST00000596014 LOC107984156A0A0G2JMH3 177 aa12.13□□□□□ -0.47
PNKP-207ENST00000596014 COX17Q14061 63 aa12.13□□□□□ -0.47
PNKP-207ENST00000596014 ARL17AQ8IVW1 177 aa12.13□□□□□ -0.47
PNKP-207ENST00000596014 SOSTDC1Q6X4U4 206 aa12.12□□□□□ -0.47
PNKP-207ENST00000596014 Q1RN00 199 aa12.11□□□□□ -0.47
PNKP-207ENST00000596014 H7C2G1 150 aa12.1□□□□□ -0.47
PNKP-207ENST00000596014 KRTAP7-1Q8IUC3 87 aa12.1□□□□□ -0.47
PNKP-207ENST00000596014 H3BMG7 143 aa12.09□□□□□ -0.47
PNKP-207ENST00000596014 FAM19A5Q7Z5A7 132 aaPredicted RBP12.09□□□□□ -0.47
PNKP-207ENST00000596014 PLA2G1BP04054 148 aaKnown RBP12.08□□□□□ -0.48
PNKP-207ENST00000596014 RPL13AP40429 203 aaKnown RBP12.08□□□□□ -0.48
PNKP-207ENST00000596014 PSMB2P49721 201 aa12.08□□□□□ -0.48
PNKP-207ENST00000596014 C7orf33Q8WU49 177 aa12.08□□□□□ -0.48
PNKP-207ENST00000596014 LINC00158P58513 81 aa12.07□□□□□ -0.48
PNKP-207ENST00000596014 MIR7-3HGQ8N6C7 128 aa12.07□□□□□ -0.48
PNKP-207ENST00000596014 CBY1Q9Y3M2 126 aa12.07□□□□□ -0.48
PNKP-207ENST00000596014 SND1-IT1Q9HBX3 110 aa12.06□□□□□ -0.48
PNKP-207ENST00000596014 ABCA13Q86UQ4 5058 aa12.06□□□□□ -0.48
PNKP-207ENST00000596014 TCL1BO95988 128 aa12.06□□□□□ -0.48
PNKP-207ENST00000596014 SERTAD4-AS1Q5TG53 156 aa12.06□□□□□ -0.48
PNKP-207ENST00000596014 PHF5AQ7RTV0 110 aaKnown RBP12.06□□□□□ -0.48
PNKP-207ENST00000596014 TRBV20-1A0A075B6N2 111 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms