RNA–Protein interactions for RNA: ENST00000595560.1

ZNF550-207, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 565 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-207ENST00000595560 LINC00158P58513 81 aa9.48□□□□□ -0.89
ZNF550-207ENST00000595560 HERV-K104P63124 156 aa9.48□□□□□ -0.89
ZNF550-207ENST00000595560 IGKV2-28A0A075B6P5 120 aa9.47□□□□□ -0.89
ZNF550-207ENST00000595560 IGKV2D-28P01615 120 aa9.47□□□□□ -0.89
ZNF550-207ENST00000595560 Q8NDZ9 215 aa9.47□□□□□ -0.89
ZNF550-207ENST00000595560 HIST1H2BKO60814 126 aa9.46□□□□□ -0.9
ZNF550-207ENST00000595560 HIST1H2BJP06899 126 aa9.46□□□□□ -0.9
ZNF550-207ENST00000595560 HIST1H2BOP23527 126 aa9.46□□□□□ -0.9
ZNF550-207ENST00000595560 HIST1H2BBP33778 126 aa9.46□□□□□ -0.9
ZNF550-207ENST00000595560 HIST1H2BDP58876 126 aa9.46□□□□□ -0.9
ZNF550-207ENST00000595560 HIST1H2BCP62807 126 aa9.46□□□□□ -0.9
ZNF550-207ENST00000595560 HIST2H2BEQ16778 126 aa9.46□□□□□ -0.9
ZNF550-207ENST00000595560 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.46□□□□□ -0.9
ZNF550-207ENST00000595560 HIST1H2BHQ93079 126 aa9.46□□□□□ -0.9
ZNF550-207ENST00000595560 HIST1H2BNQ99877 126 aa9.46□□□□□ -0.9
ZNF550-207ENST00000595560 HIST1H2BMQ99879 126 aa9.46□□□□□ -0.9
ZNF550-207ENST00000595560 NDUFA12Q9UI09 145 aa9.46□□□□□ -0.9
ZNF550-207ENST00000595560 DPM2O94777 84 aa9.45□□□□□ -0.9
ZNF550-207ENST00000595560 KRTAP13-1Q8IUC0 172 aa9.45□□□□□ -0.9
ZNF550-207ENST00000595560 A0A0U1RRA0 63 aa9.44□□□□□ -0.9
ZNF550-207ENST00000595560 MYMXA0A1B0GTQ4 84 aa9.44□□□□□ -0.9
ZNF550-207ENST00000595560 LINC00587B1AMM8 73 aa9.44□□□□□ -0.9
ZNF550-207ENST00000595560 LEPROTO15243 131 aa9.44□□□□□ -0.9
ZNF550-207ENST00000595560 SMIM13P0DJ93 91 aa9.44□□□□□ -0.9
ZNF550-207ENST00000595560 RPL13AP40429 203 aaKnown RBP9.44□□□□□ -0.9
ZNF550-207ENST00000595560 MEIG1Q5JSS6 88 aa9.44□□□□□ -0.9
ZNF550-207ENST00000595560 MAP1LC3CQ9BXW4 147 aa9.44□□□□□ -0.9
ZNF550-207ENST00000595560 IGKCP01834 107 aa9.43□□□□□ -0.9
ZNF550-207ENST00000595560 UBE2AP49459 152 aa9.43□□□□□ -0.9
ZNF550-207ENST00000595560 TSPEAR-AS2P59090 65 aa9.43□□□□□ -0.9
ZNF550-207ENST00000595560 PLEKHB2Q96CS7 222 aa9.43□□□□□ -0.9
ZNF550-207ENST00000595560 PMCHL2Q9BQD1 86 aa9.43□□□□□ -0.9
ZNF550-207ENST00000595560 HERVK_113P61574 105 aa9.42□□□□□ -0.9
ZNF550-207ENST00000595560 MIR7-3HGQ8N6C7 128 aa9.42□□□□□ -0.9
ZNF550-207ENST00000595560 TMEM126AQ9H061 195 aa9.42□□□□□ -0.9
ZNF550-207ENST00000595560 TMEM238C9JI98 176 aa9.4□□□□□ -0.9
ZNF550-207ENST00000595560 J3QQQ9 107 aa9.4□□□□□ -0.9
ZNF550-207ENST00000595560 M0R378 163 aa9.4□□□□□ -0.9
ZNF550-207ENST00000595560 BOD1L2Q8IYS8 172 aa9.4□□□□□ -0.9
ZNF550-207ENST00000595560 NMUP48645 174 aa9.39□□□□□ -0.91
ZNF550-207ENST00000595560 UBR4Q5T4S7 5183 aa9.39□□□□□ -0.91
ZNF550-207ENST00000595560 SYS1-DBNDD2H3BUS1 97 aa9.38□□□□□ -0.91
ZNF550-207ENST00000595560 PRLHP81277 87 aa9.38□□□□□ -0.91
ZNF550-207ENST00000595560 FAM19A1Q7Z5A9 133 aa9.38□□□□□ -0.91
ZNF550-207ENST00000595560 IGKV2D-26A0A0A0MRZ7 120 aa9.37□□□□□ -0.91
ZNF550-207ENST00000595560 LGALS3P17931 250 aaKnown RBP9.37□□□□□ -0.91
ZNF550-207ENST00000595560 LOC107984156A0A0G2JMH3 177 aa9.36□□□□□ -0.91
ZNF550-207ENST00000595560 ARL17AQ8IVW1 177 aa9.36□□□□□ -0.91
ZNF550-207ENST00000595560 LRP2P98164 4655 aa9.36□□□□□ -0.91
ZNF550-207ENST00000595560 A0A087X002 238 aa9.35□□□□□ -0.91
ZNF550-207ENST00000595560 E9PLD3 99 aa9.35□□□□□ -0.91
ZNF550-207ENST00000595560 CRYGAP11844 174 aa9.35□□□□□ -0.91
ZNF550-207ENST00000595560 COA6Q5JTJ3 125 aaKnown RBP9.35□□□□□ -0.91
ZNF550-207ENST00000595560 LINC01545Q5VT33 79 aa9.35□□□□□ -0.91
ZNF550-207ENST00000595560 NCR3O14931 201 aa9.34□□□□□ -0.91
ZNF550-207ENST00000595560 DAND5Q8N907 189 aa9.34□□□□□ -0.91
ZNF550-207ENST00000595560 PRYO14603 147 aa9.33□□□□□ -0.92
ZNF550-207ENST00000595560 FAM229BQ4G0N7 80 aa9.33□□□□□ -0.92
ZNF550-207ENST00000595560 PET117Q6UWS5 81 aa9.33□□□□□ -0.92
ZNF550-207ENST00000595560 KCNQ1DNQ9H478 68 aa9.32□□□□□ -0.92
ZNF550-207ENST00000595560 MIEN1Q9BRT3 115 aa9.31□□□□□ -0.92
ZNF550-207ENST00000595560 ANAPC11Q9NYG5 84 aa9.31□□□□□ -0.92
ZNF550-207ENST00000595560 A0A0J9YXY3 114 aa9.3□□□□□ -0.92
ZNF550-207ENST00000595560 TRBV10-3A0A0K0K1G6 114 aa9.3□□□□□ -0.92
ZNF550-207ENST00000595560 TRBV10-2A0A0K0K1G8 114 aa9.3□□□□□ -0.92
ZNF550-207ENST00000595560 SPRR1AP35321 89 aa9.3□□□□□ -0.92
ZNF550-207ENST00000595560 LINC00337Q8N6G1 96 aa9.3□□□□□ -0.92
ZNF550-207ENST00000595560 TYMSOSQ8TAI1 123 aa9.3□□□□□ -0.92
ZNF550-207ENST00000595560 C3orf79P0CE67 100 aa9.29□□□□□ -0.92
ZNF550-207ENST00000595560 KRTAP13-2Q52LG2 175 aa9.29□□□□□ -0.92
ZNF550-207ENST00000595560 HIGD2AQ9BW72 106 aa9.29□□□□□ -0.92
ZNF550-207ENST00000595560 SPANXB1Q9NS25 103 aaPredicted RBP9.29□□□□□ -0.92
ZNF550-207ENST00000595560 KRTAP4-16G5E9R7 235 aaPredicted RBP9.28□□□□□ -0.92
ZNF550-207ENST00000595560 NDUFC2O95298 119 aa9.28□□□□□ -0.92
ZNF550-207ENST00000595560 S100A12P80511 92 aa9.27□□□□□ -0.93
ZNF550-207ENST00000595560 ADAMTSL4-AS1Q5T5F5 129 aa9.27□□□□□ -0.93
ZNF550-207ENST00000595560 DDTP30046 118 aa9.26□□□□□ -0.93
ZNF550-207ENST00000595560 KRTDAPP60985 99 aa9.26□□□□□ -0.93
ZNF550-207ENST00000595560 ETDCA0A1B0GVM5 59 aa9.25□□□□□ -0.93
ZNF550-207ENST00000595560 SOSTDC1Q6X4U4 206 aa9.25□□□□□ -0.93
ZNF550-207ENST00000595560 EIF4EBP3O60516 100 aaPredicted RBP9.24□□□□□ -0.93
ZNF550-207ENST00000595560 TIMM17BO60830 172 aa9.24□□□□□ -0.93
ZNF550-207ENST00000595560 SPRR4Q96PI1 79 aa9.24□□□□□ -0.93
ZNF550-207ENST00000595560 LITAFQ99732 161 aa9.24□□□□□ -0.93
ZNF550-207ENST00000595560 ZNF706Q9Y5V0 76 aaPredicted RBP9.24□□□□□ -0.93
ZNF550-207ENST00000595560 C20orf202A1L168 122 aa9.23□□□□□ -0.93
ZNF550-207ENST00000595560 ZNF815PA8K554 130 aa9.23□□□□□ -0.93
ZNF550-207ENST00000595560 IGLV6-57P01721 117 aa9.23□□□□□ -0.93
ZNF550-207ENST00000595560 NPC2P61916 151 aa9.23□□□□□ -0.93
ZNF550-207ENST00000595560 S100A6P06703 90 aa9.22□□□□□ -0.93
ZNF550-207ENST00000595560 S100A7L2Q5SY68 101 aa9.22□□□□□ -0.93
ZNF550-207ENST00000595560 B5MCH6 92 aa9.21□□□□□ -0.94
ZNF550-207ENST00000595560 TSPAN13O95857 204 aa9.21□□□□□ -0.94
ZNF550-207ENST00000595560 LINC00304Q8N9R0 145 aa9.21□□□□□ -0.94
ZNF550-207ENST00000595560 SMCR5Q8TEV8 140 aa9.21□□□□□ -0.94
ZNF550-207ENST00000595560 HIST3H2BBQ8N257 126 aa9.2□□□□□ -0.94
ZNF550-207ENST00000595560 LINC00308Q8TCZ7 52 aa9.2□□□□□ -0.94
ZNF550-207ENST00000595560 TTTY13Q9BZ97 58 aa9.2□□□□□ -0.94
ZNF550-207ENST00000595560 AKR1D1P51857 326 aa9.19□□□□□ -0.94
ZNF550-207ENST00000595560 PRR4Q16378 134 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 238.2 ms