RNA–Protein interactions for RNA: ENST00000594213.5

GTF2F1-203, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 1,002 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-203ENST00000594213 SPRR4Q96PI1 79 aa9.05□□□□□ -0.96
GTF2F1-203ENST00000594213 S100PP25815 95 aa9.04□□□□□ -0.96
GTF2F1-203ENST00000594213 C11orf86A6NJI1 115 aa9.03□□□□□ -0.96
GTF2F1-203ENST00000594213 NDUFA6P56556 154 aa9.03□□□□□ -0.96
GTF2F1-203ENST00000594213 FP248Q71RG6 208 aaPredicted RBP9.03□□□□□ -0.96
GTF2F1-203ENST00000594213 HIGD2AQ9BW72 106 aa9.03□□□□□ -0.96
GTF2F1-203ENST00000594213 SEC11CQ9BY50 192 aa9.03□□□□□ -0.96
GTF2F1-203ENST00000594213 SFTA2Q6UW10 78 aa9.02□□□□□ -0.97
GTF2F1-203ENST00000594213 LINC00614P0C842 121 aa9.01□□□□□ -0.97
GTF2F1-203ENST00000594213 HBDP02042 147 aa9□□□□□ -0.97
GTF2F1-203ENST00000594213 KRTAP13-3Q3SY46 172 aa9□□□□□ -0.97
GTF2F1-203ENST00000594213 C18orf32Q8TCD1 76 aa9□□□□□ -0.97
GTF2F1-203ENST00000594213 BAGE3Q86Y29 109 aa8.99□□□□□ -0.97
GTF2F1-203ENST00000594213 SPRR1AP35321 89 aa8.98□□□□□ -0.97
GTF2F1-203ENST00000594213 LINC00158P58513 81 aa8.98□□□□□ -0.97
GTF2F1-203ENST00000594213 PMCHL1Q16048 86 aa8.98□□□□□ -0.97
GTF2F1-203ENST00000594213 ASB16-AS1Q495Z4 193 aa8.98□□□□□ -0.97
GTF2F1-203ENST00000594213 TMEM170BQ5T4T1 132 aa8.98□□□□□ -0.97
GTF2F1-203ENST00000594213 KRTAP4-16G5E9R7 235 aaPredicted RBP8.97□□□□□ -0.97
GTF2F1-203ENST00000594213 IFITM2Q01629 132 aa8.97□□□□□ -0.97
GTF2F1-203ENST00000594213 C10orf91Q5T1B1 145 aa8.97□□□□□ -0.97
GTF2F1-203ENST00000594213 DAND5Q8N907 189 aa8.97□□□□□ -0.97
GTF2F1-203ENST00000594213 ZNF706Q9Y5V0 76 aaPredicted RBP8.97□□□□□ -0.97
GTF2F1-203ENST00000594213 C4orf48Q5BLP8 95 aa8.96□□□□□ -0.98
GTF2F1-203ENST00000594213 LINC00337Q8N6G1 96 aa8.96□□□□□ -0.98
GTF2F1-203ENST00000594213 Q8NBF4 154 aa8.96□□□□□ -0.98
GTF2F1-203ENST00000594213 KRTAP4-1Q9BYQ7 146 aa8.96□□□□□ -0.98
GTF2F1-203ENST00000594213 KCNQ1DNQ9H478 68 aa8.96□□□□□ -0.98
GTF2F1-203ENST00000594213 A0A0U1RRA0 63 aa8.95□□□□□ -0.98
GTF2F1-203ENST00000594213 TMEM223A0PJW6 202 aa8.95□□□□□ -0.98
GTF2F1-203ENST00000594213 PRYO14603 147 aa8.95□□□□□ -0.98
GTF2F1-203ENST00000594213 SMCR5Q8TEV8 140 aa8.95□□□□□ -0.98
GTF2F1-203ENST00000594213 LINC00483Q53H64 154 aa8.94□□□□□ -0.98
GTF2F1-203ENST00000594213 TRAPPC1Q9Y5R8 145 aa8.94□□□□□ -0.98
GTF2F1-203ENST00000594213 SPINK1P00995 79 aa8.93□□□□□ -0.98
GTF2F1-203ENST00000594213 SMIM13P0DJ93 91 aa8.93□□□□□ -0.98
GTF2F1-203ENST00000594213 RHEBQ15382 184 aa8.93□□□□□ -0.98
GTF2F1-203ENST00000594213 RPS10P5Q9NQ39 176 aa8.93□□□□□ -0.98
GTF2F1-203ENST00000594213 CHTOPQ9Y3Y2 248 aaKnown RBP8.93□□□□□ -0.98
GTF2F1-203ENST00000594213 BOD1L2Q8IYS8 172 aa8.92□□□□□ -0.98
GTF2F1-203ENST00000594213 TRAV12-1A0A0B4J245 112 aa8.9□□□□□ -0.98
GTF2F1-203ENST00000594213 MIR7-3HGQ8N6C7 128 aa8.9□□□□□ -0.98
GTF2F1-203ENST00000594213 TRBV10-3A0A0K0K1G6 114 aa8.89□□□□□ -0.99
GTF2F1-203ENST00000594213 NCR3O14931 201 aa8.89□□□□□ -0.99
GTF2F1-203ENST00000594213 ETDCA0A1B0GVM5 59 aa8.88□□□□□ -0.99
GTF2F1-203ENST00000594213 LCE2DQ5TA82 110 aaPredicted RBP8.88□□□□□ -0.99
GTF2F1-203ENST00000594213 COMMD7Q86VX2 200 aa8.88□□□□□ -0.99
GTF2F1-203ENST00000594213 B5MCH6 92 aa8.87□□□□□ -0.99
GTF2F1-203ENST00000594213 ATP6V1G1O75348 118 aa8.87□□□□□ -0.99
GTF2F1-203ENST00000594213 ERC2-IT1O76042 136 aa8.87□□□□□ -0.99
GTF2F1-203ENST00000594213 SEC61BP60468 96 aaKnown RBP8.87□□□□□ -0.99
GTF2F1-203ENST00000594213 RPS29P62273 56 aaKnown RBP8.87□□□□□ -0.99
GTF2F1-203ENST00000594213 HERV-K104P63124 156 aa8.87□□□□□ -0.99
GTF2F1-203ENST00000594213 Q8N377 158 aa8.87□□□□□ -0.99
GTF2F1-203ENST00000594213 LOC107984156A0A0G2JMH3 177 aa8.86□□□□□ -0.99
GTF2F1-203ENST00000594213 LINC01547P58512 204 aaPredicted RBP8.86□□□□□ -0.99
GTF2F1-203ENST00000594213 MEIG1Q5JSS6 88 aa8.86□□□□□ -0.99
GTF2F1-203ENST00000594213 GAGE2AQ6NT46 116 aa8.86□□□□□ -0.99
GTF2F1-203ENST00000594213 SSBP3-AS1Q7Z2R9 100 aa8.86□□□□□ -0.99
GTF2F1-203ENST00000594213 ARL17AQ8IVW1 177 aa8.86□□□□□ -0.99
GTF2F1-203ENST00000594213 IFI27L1Q96BM0 104 aa8.86□□□□□ -0.99
GTF2F1-203ENST00000594213 NDUFA12Q9UI09 145 aa8.85□□□□□ -0.99
GTF2F1-203ENST00000594213 LINC00587B1AMM8 73 aa8.84□□□□□ -0.99
GTF2F1-203ENST00000594213 MOBPQ13875 183 aa8.84□□□□□ -0.99
GTF2F1-203ENST00000594213 CHCHD1Q96BP2 118 aaKnown RBP8.84□□□□□ -0.99
GTF2F1-203ENST00000594213 Q9BRP9 147 aa8.84□□□□□ -0.99
GTF2F1-203ENST00000594213 XP32Q5T750 250 aa8.83□□□□□ -1
GTF2F1-203ENST00000594213 IGLV9-49A0A0B4J1Y8 123 aa8.81□□□□□ -1
GTF2F1-203ENST00000594213 TRBV10-2A0A0K0K1G8 114 aa8.81□□□□□ -1
GTF2F1-203ENST00000594213 MYMXA0A1B0GTQ4 84 aa8.81□□□□□ -1
GTF2F1-203ENST00000594213 LCE2CQ5TA81 110 aa8.81□□□□□ -1
GTF2F1-203ENST00000594213 FAM19A2Q8N3H0 131 aa8.81□□□□□ -1
GTF2F1-203ENST00000594213 YPEL4Q96NS1 127 aa8.81□□□□□ -1
GTF2F1-203ENST00000594213 SLC25A20O43772 301 aa8.8□□□□□ -1
GTF2F1-203ENST00000594213 TSPEAR-AS2P59090 65 aa8.8□□□□□ -1
GTF2F1-203ENST00000594213 MAP1LC3CQ9BXW4 147 aa8.8□□□□□ -1
GTF2F1-203ENST00000594213 DDTP30046 118 aa8.79□□□□□ -1
GTF2F1-203ENST00000594213 Q6ZRX8 168 aa8.79□□□□□ -1
GTF2F1-203ENST00000594213 S100A12P80511 92 aa8.78□□□□□ -1
GTF2F1-203ENST00000594213 IGLV6-57P01721 117 aa8.77□□□□□ -1.01
GTF2F1-203ENST00000594213 LEPROTO15243 131 aa8.76□□□□□ -1.01
GTF2F1-203ENST00000594213 APOC3P02656 99 aa8.76□□□□□ -1.01
GTF2F1-203ENST00000594213 KRTAP19-2Q3LHN2 52 aa8.76□□□□□ -1.01
GTF2F1-203ENST00000594213 FSIP2Q5CZC0 6907 aa8.76□□□□□ -1.01
GTF2F1-203ENST00000594213 SPANXB1Q9NS25 103 aaPredicted RBP8.75□□□□□ -1.01
GTF2F1-203ENST00000594213 NDUFC2O95298 119 aa8.74□□□□□ -1.01
GTF2F1-203ENST00000594213 SNAPINO95295 136 aa8.73□□□□□ -1.01
GTF2F1-203ENST00000594213 CRCT1Q9UGL9 99 aa8.73□□□□□ -1.01
GTF2F1-203ENST00000594213 J3QQQ9 107 aa8.72□□□□□ -1.01
GTF2F1-203ENST00000594213 HSBP1O75506 76 aa8.72□□□□□ -1.01
GTF2F1-203ENST00000594213 SVBPQ8N300 66 aa8.72□□□□□ -1.01
GTF2F1-203ENST00000594213 EIF4EBP3O60516 100 aaPredicted RBP8.71□□□□□ -1.02
GTF2F1-203ENST00000594213 LINC00310P59036 64 aa8.71□□□□□ -1.02
GTF2F1-203ENST00000594213 SOSTDC1Q6X4U4 206 aa8.71□□□□□ -1.02
GTF2F1-203ENST00000594213 ST20-AS1Q8NBB2 130 aa8.71□□□□□ -1.02
GTF2F1-203ENST00000594213 TRAV23DV6A0A075B6W5 121 aa8.7□□□□□ -1.02
GTF2F1-203ENST00000594213 C5orf52A6NGY3 159 aa8.7□□□□□ -1.02
GTF2F1-203ENST00000594213 H0Y8G0 127 aa8.7□□□□□ -1.02
GTF2F1-203ENST00000594213 NMUP48645 174 aa8.7□□□□□ -1.02
GTF2F1-203ENST00000594213 JOSD1Q15040 202 aaPredicted RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms