RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 TMEM218A2RU14 115 aa9.92□□□□□ -0.82
RETREG3-212ENST00000593251 SPAG11AQ6PDA7 123 aa9.92□□□□□ -0.82
RETREG3-212ENST00000593251 DAND5Q8N907 189 aa9.92□□□□□ -0.82
RETREG3-212ENST00000593251 A0A096LNJ9 63 aa9.91□□□□□ -0.82
RETREG3-212ENST00000593251 SFTA2Q6UW10 78 aa9.91□□□□□ -0.82
RETREG3-212ENST00000593251 C4orf48Q5BLP8 95 aa9.9□□□□□ -0.82
RETREG3-212ENST00000593251 LINC00337Q8N6G1 96 aa9.9□□□□□ -0.82
RETREG3-212ENST00000593251 A0A0U1RRA0 63 aa9.89□□□□□ -0.83
RETREG3-212ENST00000593251 C11orf86A6NJI1 115 aa9.89□□□□□ -0.83
RETREG3-212ENST00000593251 KRTAP13-3Q3SY46 172 aa9.89□□□□□ -0.83
RETREG3-212ENST00000593251 FP248Q71RG6 208 aaPredicted RBP9.89□□□□□ -0.83
RETREG3-212ENST00000593251 Q8NBF4 154 aa9.89□□□□□ -0.83
RETREG3-212ENST00000593251 LINC00158P58513 81 aa9.88□□□□□ -0.83
RETREG3-212ENST00000593251 URB1-AS1Q96HZ7 61 aa9.88□□□□□ -0.83
RETREG3-212ENST00000593251 SEC11CQ9BY50 192 aa9.88□□□□□ -0.83
RETREG3-212ENST00000593251 LINC00614P0C842 121 aa9.87□□□□□ -0.83
RETREG3-212ENST00000593251 PMCHL1Q16048 86 aa9.87□□□□□ -0.83
RETREG3-212ENST00000593251 TMEM170BQ5T4T1 132 aa9.87□□□□□ -0.83
RETREG3-212ENST00000593251 KRTAP4-1Q9BYQ7 146 aa9.87□□□□□ -0.83
RETREG3-212ENST00000593251 HBDP02042 147 aa9.86□□□□□ -0.83
RETREG3-212ENST00000593251 BAGE3Q86Y29 109 aa9.86□□□□□ -0.83
RETREG3-212ENST00000593251 ZNF706Q9Y5V0 76 aaPredicted RBP9.86□□□□□ -0.83
RETREG3-212ENST00000593251 ASB16-AS1Q495Z4 193 aa9.85□□□□□ -0.83
RETREG3-212ENST00000593251 NCR3O14931 201 aa9.83□□□□□ -0.84
RETREG3-212ENST00000593251 LINC01547P58512 204 aaPredicted RBP9.83□□□□□ -0.84
RETREG3-212ENST00000593251 SMCR5Q8TEV8 140 aa9.83□□□□□ -0.84
RETREG3-212ENST00000593251 PRYO14603 147 aa9.82□□□□□ -0.84
RETREG3-212ENST00000593251 ATP6V1G1O75348 118 aa9.82□□□□□ -0.84
RETREG3-212ENST00000593251 C18orf32Q8TCD1 76 aa9.82□□□□□ -0.84
RETREG3-212ENST00000593251 RPS10P5Q9NQ39 176 aa9.82□□□□□ -0.84
RETREG3-212ENST00000593251 TRAPPC1Q9Y5R8 145 aa9.82□□□□□ -0.84
RETREG3-212ENST00000593251 SMIM13P0DJ93 91 aa9.8□□□□□ -0.84
RETREG3-212ENST00000593251 RHEBQ15382 184 aa9.8□□□□□ -0.84
RETREG3-212ENST00000593251 BOD1L2Q8IYS8 172 aa9.8□□□□□ -0.84
RETREG3-212ENST00000593251 CHTOPQ9Y3Y2 248 aaKnown RBP9.8□□□□□ -0.84
RETREG3-212ENST00000593251 SPINK1P00995 79 aa9.79□□□□□ -0.84
RETREG3-212ENST00000593251 SPRR1AP35321 89 aa9.79□□□□□ -0.84
RETREG3-212ENST00000593251 ETDCA0A1B0GVM5 59 aa9.78□□□□□ -0.84
RETREG3-212ENST00000593251 TMEM223A0PJW6 202 aa9.78□□□□□ -0.84
RETREG3-212ENST00000593251 SEC61BP60468 96 aaKnown RBP9.78□□□□□ -0.84
RETREG3-212ENST00000593251 KRTAP4-16G5E9R7 235 aaPredicted RBP9.77□□□□□ -0.85
RETREG3-212ENST00000593251 GAGE2AQ6NT46 116 aa9.77□□□□□ -0.85
RETREG3-212ENST00000593251 MIR7-3HGQ8N6C7 128 aa9.77□□□□□ -0.85
RETREG3-212ENST00000593251 KCNQ1DNQ9H478 68 aa9.77□□□□□ -0.85
RETREG3-212ENST00000593251 IGLV9-49A0A0B4J1Y8 123 aa9.76□□□□□ -0.85
RETREG3-212ENST00000593251 TRBV10-3A0A0K0K1G6 114 aa9.76□□□□□ -0.85
RETREG3-212ENST00000593251 MOBPQ13875 183 aa9.76□□□□□ -0.85
RETREG3-212ENST00000593251 LINC00483Q53H64 154 aa9.76□□□□□ -0.85
RETREG3-212ENST00000593251 MEIG1Q5JSS6 88 aa9.76□□□□□ -0.85
RETREG3-212ENST00000593251 C10orf91Q5T1B1 145 aa9.75□□□□□ -0.85
RETREG3-212ENST00000593251 LCE2DQ5TA82 110 aaPredicted RBP9.75□□□□□ -0.85
RETREG3-212ENST00000593251 COMMD7Q86VX2 200 aa9.75□□□□□ -0.85
RETREG3-212ENST00000593251 ERC2-IT1O76042 136 aa9.74□□□□□ -0.85
RETREG3-212ENST00000593251 IFITM2Q01629 132 aa9.74□□□□□ -0.85
RETREG3-212ENST00000593251 TRAV12-1A0A0B4J245 112 aa9.73□□□□□ -0.85
RETREG3-212ENST00000593251 LINC00587B1AMM8 73 aa9.73□□□□□ -0.85
RETREG3-212ENST00000593251 HERV-K104P63124 156 aa9.73□□□□□ -0.85
RETREG3-212ENST00000593251 S100A12P80511 92 aa9.73□□□□□ -0.85
RETREG3-212ENST00000593251 Q8N377 158 aa9.73□□□□□ -0.85
RETREG3-212ENST00000593251 NDUFA12Q9UI09 145 aa9.73□□□□□ -0.85
RETREG3-212ENST00000593251 IFI27L1Q96BM0 104 aa9.72□□□□□ -0.85
RETREG3-212ENST00000593251 B5MCH6 92 aa9.71□□□□□ -0.86
RETREG3-212ENST00000593251 MAP1LC3CQ9BXW4 147 aa9.7□□□□□ -0.86
RETREG3-212ENST00000593251 FSIP2Q5CZC0 6907 aa9.7□□□□□ -0.86
RETREG3-212ENST00000593251 SSBP3-AS1Q7Z2R9 100 aa9.69□□□□□ -0.86
RETREG3-212ENST00000593251 FAM19A2Q8N3H0 131 aa9.69□□□□□ -0.86
RETREG3-212ENST00000593251 CHCHD1Q96BP2 118 aaKnown RBP9.69□□□□□ -0.86
RETREG3-212ENST00000593251 Q9BRP9 147 aa9.69□□□□□ -0.86
RETREG3-212ENST00000593251 MYMXA0A1B0GTQ4 84 aa9.68□□□□□ -0.86
RETREG3-212ENST00000593251 RPS29P62273 56 aaKnown RBP9.68□□□□□ -0.86
RETREG3-212ENST00000593251 SLC25A20O43772 301 aa9.67□□□□□ -0.86
RETREG3-212ENST00000593251 XP32Q5T750 250 aa9.67□□□□□ -0.86
RETREG3-212ENST00000593251 CRCT1Q9UGL9 99 aa9.67□□□□□ -0.86
RETREG3-212ENST00000593251 DDTP30046 118 aa9.66□□□□□ -0.86
RETREG3-212ENST00000593251 LCE2CQ5TA81 110 aa9.65□□□□□ -0.86
RETREG3-212ENST00000593251 TSPEAR-AS2P59090 65 aa9.64□□□□□ -0.87
RETREG3-212ENST00000593251 Q6ZRX8 168 aa9.64□□□□□ -0.87
RETREG3-212ENST00000593251 SNAPINO95295 136 aa9.63□□□□□ -0.87
RETREG3-212ENST00000593251 APOC3P02656 99 aa9.63□□□□□ -0.87
RETREG3-212ENST00000593251 C9orf153Q5TBE3 101 aa9.63□□□□□ -0.87
RETREG3-212ENST00000593251 LOC107984156A0A0G2JMH3 177 aa9.62□□□□□ -0.87
RETREG3-212ENST00000593251 TRBV10-2A0A0K0K1G8 114 aa9.62□□□□□ -0.87
RETREG3-212ENST00000593251 H0Y8G0 127 aa9.62□□□□□ -0.87
RETREG3-212ENST00000593251 ARL17AQ8IVW1 177 aa9.62□□□□□ -0.87
RETREG3-212ENST00000593251 NDUFA5Q16718 116 aa9.61□□□□□ -0.87
RETREG3-212ENST00000593251 LEPROTO15243 131 aa9.6□□□□□ -0.87
RETREG3-212ENST00000593251 HSBP1O75506 76 aa9.6□□□□□ -0.87
RETREG3-212ENST00000593251 SVBPQ8N300 66 aa9.6□□□□□ -0.87
RETREG3-212ENST00000593251 KRTAP19-2Q3LHN2 52 aa9.59□□□□□ -0.87
RETREG3-212ENST00000593251 JOSD1Q15040 202 aaPredicted RBP9.58□□□□□ -0.88
RETREG3-212ENST00000593251 S100A7L2Q5SY68 101 aa9.58□□□□□ -0.88
RETREG3-212ENST00000593251 ST20-AS1Q8NBB2 130 aa9.58□□□□□ -0.88
RETREG3-212ENST00000593251 MIEN1Q9BRT3 115 aa9.58□□□□□ -0.88
RETREG3-212ENST00000593251 SPANXB1Q9NS25 103 aaPredicted RBP9.58□□□□□ -0.88
RETREG3-212ENST00000593251 IGLV6-57P01721 117 aa9.56□□□□□ -0.88
RETREG3-212ENST00000593251 TRAV23DV6A0A075B6W5 121 aa9.55□□□□□ -0.88
RETREG3-212ENST00000593251 J3QQQ9 107 aa9.55□□□□□ -0.88
RETREG3-212ENST00000593251 PLNP26678 52 aa9.55□□□□□ -0.88
RETREG3-212ENST00000593251 MT1HP80294 61 aa9.55□□□□□ -0.88
RETREG3-212ENST00000593251 PCOTHQ58A44 107 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms