RNA–Protein interactions for RNA: ENST00000592965.2

MBD3-211, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-211ENST00000592965 SERF1AO75920 110 aa13.7□□□□□ -0.22
MBD3-211ENST00000592965 TYMSOSQ8TAI1 123 aa13.7□□□□□ -0.22
MBD3-211ENST00000592965 HSBP1O75506 76 aa13.69□□□□□ -0.22
MBD3-211ENST00000592965 CHTOPQ9Y3Y2 248 aaKnown RBP13.69□□□□□ -0.22
MBD3-211ENST00000592965 FAM229BQ4G0N7 80 aa13.68□□□□□ -0.22
MBD3-211ENST00000592965 Q8NDZ9 215 aa13.67□□□□□ -0.22
MBD3-211ENST00000592965 TMEM126AQ9H061 195 aa13.67□□□□□ -0.22
MBD3-211ENST00000592965 ANAPC11Q9NYG5 84 aa13.67□□□□□ -0.22
MBD3-211ENST00000592965 TRAV12-1A0A0B4J245 112 aa13.66□□□□□ -0.22
MBD3-211ENST00000592965 TSPAN13O95857 204 aa13.66□□□□□ -0.22
MBD3-211ENST00000592965 TMEM238C9JI98 176 aa13.65□□□□□ -0.22
MBD3-211ENST00000592965 PRLHP81277 87 aa13.65□□□□□ -0.22
MBD3-211ENST00000592965 KRTAP13-2Q52LG2 175 aa13.65□□□□□ -0.22
MBD3-211ENST00000592965 TMEM223A0PJW6 202 aa13.64□□□□□ -0.23
MBD3-211ENST00000592965 S100A1P23297 94 aa13.64□□□□□ -0.23
MBD3-211ENST00000592965 M0R378 163 aa13.63□□□□□ -0.23
MBD3-211ENST00000592965 ATP6V1G1O75348 118 aa13.63□□□□□ -0.23
MBD3-211ENST00000592965 FAM19A1Q7Z5A9 133 aa13.63□□□□□ -0.23
MBD3-211ENST00000592965 HIST1H2BKO60814 126 aa13.61□□□□□ -0.23
MBD3-211ENST00000592965 HIST1H2BJP06899 126 aa13.61□□□□□ -0.23
MBD3-211ENST00000592965 HIST1H2BOP23527 126 aa13.61□□□□□ -0.23
MBD3-211ENST00000592965 HIST1H2BBP33778 126 aa13.61□□□□□ -0.23
MBD3-211ENST00000592965 LINC00158P58513 81 aa13.61□□□□□ -0.23
MBD3-211ENST00000592965 HIST1H2BDP58876 126 aa13.61□□□□□ -0.23
MBD3-211ENST00000592965 HIST1H2BCP62807 126 aa13.61□□□□□ -0.23
MBD3-211ENST00000592965 HIST2H2BEQ16778 126 aa13.61□□□□□ -0.23
MBD3-211ENST00000592965 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.61□□□□□ -0.23
MBD3-211ENST00000592965 HIST1H2BHQ93079 126 aa13.61□□□□□ -0.23
MBD3-211ENST00000592965 HIST1H2BNQ99877 126 aa13.61□□□□□ -0.23
MBD3-211ENST00000592965 HIST1H2BMQ99879 126 aa13.61□□□□□ -0.23
MBD3-211ENST00000592965 LEPROTL1O95214 131 aa13.59□□□□□ -0.23
MBD3-211ENST00000592965 H0Y8G0 127 aa13.57□□□□□ -0.24
MBD3-211ENST00000592965 MUC2Q02817 5179 aa13.56□□□□□ -0.24
MBD3-211ENST00000592965 IGKV2D-26A0A0A0MRZ7 120 aa13.56□□□□□ -0.24
MBD3-211ENST00000592965 FABP4P15090 132 aa13.56□□□□□ -0.24
MBD3-211ENST00000592965 LINC00304Q8N9R0 145 aa13.56□□□□□ -0.24
MBD3-211ENST00000592965 A0A0U1RRA0 63 aa13.55□□□□□ -0.24
MBD3-211ENST00000592965 PLEKHB2Q96CS7 222 aa13.55□□□□□ -0.24
MBD3-211ENST00000592965 SMIM13P0DJ93 91 aa13.54□□□□□ -0.24
MBD3-211ENST00000592965 HERV-K104P63124 156 aa13.53□□□□□ -0.24
MBD3-211ENST00000592965 MEIG1Q5JSS6 88 aa13.52□□□□□ -0.25
MBD3-211ENST00000592965 PMCHL2Q9BQD1 86 aa13.51□□□□□ -0.25
MBD3-211ENST00000592965 HIGD2AQ9BW72 106 aa13.51□□□□□ -0.25
MBD3-211ENST00000592965 HSPB8Q9UJY1 196 aa13.51□□□□□ -0.25
MBD3-211ENST00000592965 CTAG1AP78358 180 aa13.5□□□□□ -0.25
MBD3-211ENST00000592965 BOD1L2Q8IYS8 172 aa13.5□□□□□ -0.25
MBD3-211ENST00000592965 MIR7-3HGQ8N6C7 128 aa13.5□□□□□ -0.25
MBD3-211ENST00000592965 NDUFA12Q9UI09 145 aa13.5□□□□□ -0.25
MBD3-211ENST00000592965 LINC00587B1AMM8 73 aa13.49□□□□□ -0.25
MBD3-211ENST00000592965 PRYO14603 147 aa13.49□□□□□ -0.25
MBD3-211ENST00000592965 COA6Q5JTJ3 125 aaKnown RBP13.49□□□□□ -0.25
MBD3-211ENST00000592965 MYMXA0A1B0GTQ4 84 aa13.47□□□□□ -0.25
MBD3-211ENST00000592965 TSPEAR-AS2P59090 65 aa13.47□□□□□ -0.25
MBD3-211ENST00000592965 SPRR4Q96PI1 79 aa13.46□□□□□ -0.25
MBD3-211ENST00000592965 RETNLBQ9BQ08 111 aa13.46□□□□□ -0.25
MBD3-211ENST00000592965 NCR3O14931 201 aa13.45□□□□□ -0.26
MBD3-211ENST00000592965 SPRR1AP35321 89 aa13.45□□□□□ -0.26
MBD3-211ENST00000592965 C3orf22Q8N5N4 141 aa13.45□□□□□ -0.26
MBD3-211ENST00000592965 LINC00337Q8N6G1 96 aa13.45□□□□□ -0.26
MBD3-211ENST00000592965 MAP1LC3CQ9BXW4 147 aa13.45□□□□□ -0.26
MBD3-211ENST00000592965 KCNQ1DNQ9H478 68 aa13.45□□□□□ -0.26
MBD3-211ENST00000592965 ZNF706Q9Y5V0 76 aaPredicted RBP13.44□□□□□ -0.26
MBD3-211ENST00000592965 DPM2O94777 84 aa13.43□□□□□ -0.26
MBD3-211ENST00000592965 PLNP26678 52 aa13.43□□□□□ -0.26
MBD3-211ENST00000592965 LEPROTO15243 131 aa13.42□□□□□ -0.26
MBD3-211ENST00000592965 KRTAP4-16G5E9R7 235 aaPredicted RBP13.41□□□□□ -0.26
MBD3-211ENST00000592965 IGKCP01834 107 aa13.41□□□□□ -0.26
MBD3-211ENST00000592965 TRBV10-3A0A0K0K1G6 114 aa13.4□□□□□ -0.26
MBD3-211ENST00000592965 LOC107984156A0A0G2JMH3 177 aa13.39□□□□□ -0.27
MBD3-211ENST00000592965 SYS1-DBNDD2H3BUS1 97 aa13.39□□□□□ -0.27
MBD3-211ENST00000592965 SPAG11AQ6PDA7 123 aa13.39□□□□□ -0.27
MBD3-211ENST00000592965 ARL17AQ8IVW1 177 aa13.39□□□□□ -0.27
MBD3-211ENST00000592965 ETDCA0A1B0GVM5 59 aa13.38□□□□□ -0.27
MBD3-211ENST00000592965 TPRXLQ17RH7 258 aa13.38□□□□□ -0.27
MBD3-211ENST00000592965 J3QQQ9 107 aa13.37□□□□□ -0.27
MBD3-211ENST00000592965 IGLV7-46A0A075B6I9 117 aa13.36□□□□□ -0.27
MBD3-211ENST00000592965 HERVK_113P61574 105 aa13.36□□□□□ -0.27
MBD3-211ENST00000592965 S100A12P80511 92 aa13.36□□□□□ -0.27
MBD3-211ENST00000592965 DAND5Q8N907 189 aa13.36□□□□□ -0.27
MBD3-211ENST00000592965 TRBV10-2A0A0K0K1G8 114 aa13.35□□□□□ -0.27
MBD3-211ENST00000592965 NMUP48645 174 aa13.35□□□□□ -0.27
MBD3-211ENST00000592965 SMCR5Q8TEV8 140 aa13.35□□□□□ -0.27
MBD3-211ENST00000592965 A0A0U1RQV1 116 aa13.34□□□□□ -0.27
MBD3-211ENST00000592965 LINC01545Q5VT33 79 aa13.34□□□□□ -0.27
MBD3-211ENST00000592965 C3orf79P0CE67 100 aa13.33□□□□□ -0.28
MBD3-211ENST00000592965 MUC17Q685J3 4493 aa13.33□□□□□ -0.28
MBD3-211ENST00000592965 LINC00483Q53H64 154 aa13.32□□□□□ -0.28
MBD3-211ENST00000592965 B5MCH6 92 aa13.31□□□□□ -0.28
MBD3-211ENST00000592965 LGALS3P17931 250 aaKnown RBP13.31□□□□□ -0.28
MBD3-211ENST00000592965 DDTP30046 118 aa13.31□□□□□ -0.28
MBD3-211ENST00000592965 PET117Q6UWS5 81 aa13.31□□□□□ -0.28
MBD3-211ENST00000592965 CDIP1Q9H305 208 aa13.31□□□□□ -0.28
MBD3-211ENST00000592965 SPANXB1Q9NS25 103 aaPredicted RBP13.31□□□□□ -0.28
MBD3-211ENST00000592965 E9PLD3 99 aa13.29□□□□□ -0.28
MBD3-211ENST00000592965 C4orf48Q5BLP8 95 aa13.29□□□□□ -0.28
MBD3-211ENST00000592965 Q8NBF4 154 aa13.29□□□□□ -0.28
MBD3-211ENST00000592965 MIEN1Q9BRT3 115 aa13.29□□□□□ -0.28
MBD3-211ENST00000592965 PPDPFQ9H3Y8 114 aa13.29□□□□□ -0.28
MBD3-211ENST00000592965 NDUFC2O95298 119 aa13.28□□□□□ -0.28
MBD3-211ENST00000592965 FP248Q71RG6 208 aaPredicted RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 162.4 ms