RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 CTAG1AP78358 180 aa7.79□□□□□ -1.16
APOC1-209ENST00000592885 TMEM126AQ9H061 195 aa7.78□□□□□ -1.16
APOC1-209ENST00000592885 C11orf86A6NJI1 115 aa7.77□□□□□ -1.17
APOC1-209ENST00000592885 KRTAP13-2Q52LG2 175 aa7.77□□□□□ -1.17
APOC1-209ENST00000592885 TMEM170BQ5T4T1 132 aa7.77□□□□□ -1.17
APOC1-209ENST00000592885 FAM19A1Q7Z5A9 133 aa7.77□□□□□ -1.17
APOC1-209ENST00000592885 BAGE3Q86Y29 109 aa7.77□□□□□ -1.17
APOC1-209ENST00000592885 ZNF625Q96I27 306 aaPredicted RBP7.77□□□□□ -1.17
APOC1-209ENST00000592885 TMA7Q9Y2S6 64 aaKnown RBP7.77□□□□□ -1.17
APOC1-209ENST00000592885 PRLHP81277 87 aa7.76□□□□□ -1.17
APOC1-209ENST00000592885 PMCHL1Q16048 86 aa7.76□□□□□ -1.17
APOC1-209ENST00000592885 LINC00304Q8N9R0 145 aa7.76□□□□□ -1.17
APOC1-209ENST00000592885 IGKV2D-26A0A0A0MRZ7 120 aa7.75□□□□□ -1.17
APOC1-209ENST00000592885 A0A0U1RQV1 116 aa7.75□□□□□ -1.17
APOC1-209ENST00000592885 M0R378 163 aa7.75□□□□□ -1.17
APOC1-209ENST00000592885 TRGC2P03986 189 aa7.75□□□□□ -1.17
APOC1-209ENST00000592885 ANAPC11Q9NYG5 84 aa7.75□□□□□ -1.17
APOC1-209ENST00000592885 CHTOPQ9Y3Y2 248 aaKnown RBP7.75□□□□□ -1.17
APOC1-209ENST00000592885 TRAV12-1A0A0B4J245 112 aa7.74□□□□□ -1.17
APOC1-209ENST00000592885 TMEM238C9JI98 176 aa7.74□□□□□ -1.17
APOC1-209ENST00000592885 CHCHD1Q96BP2 118 aaKnown RBP7.74□□□□□ -1.17
APOC1-209ENST00000592885 TMEM223A0PJW6 202 aa7.72□□□□□ -1.17
APOC1-209ENST00000592885 Q8NDZ9 215 aa7.72□□□□□ -1.17
APOC1-209ENST00000592885 LINC00158P58513 81 aa7.71□□□□□ -1.18
APOC1-209ENST00000592885 IFI27L1Q96BM0 104 aa7.71□□□□□ -1.18
APOC1-209ENST00000592885 PLEKHB2Q96CS7 222 aa7.71□□□□□ -1.18
APOC1-209ENST00000592885 ZNF706Q9Y5V0 76 aaPredicted RBP7.7□□□□□ -1.18
APOC1-209ENST00000592885 LINC00587B1AMM8 73 aa7.69□□□□□ -1.18
APOC1-209ENST00000592885 PRYO14603 147 aa7.69□□□□□ -1.18
APOC1-209ENST00000592885 HIST1H2BKO60814 126 aa7.69□□□□□ -1.18
APOC1-209ENST00000592885 HIST1H2BJP06899 126 aa7.69□□□□□ -1.18
APOC1-209ENST00000592885 HIST1H2BOP23527 126 aa7.69□□□□□ -1.18
APOC1-209ENST00000592885 HIST1H2BBP33778 126 aa7.69□□□□□ -1.18
APOC1-209ENST00000592885 HIST1H2BDP58876 126 aa7.69□□□□□ -1.18
APOC1-209ENST00000592885 HIST1H2BCP62807 126 aa7.69□□□□□ -1.18
APOC1-209ENST00000592885 HERV-K104P63124 156 aa7.69□□□□□ -1.18
APOC1-209ENST00000592885 HIST2H2BEQ16778 126 aa7.69□□□□□ -1.18
APOC1-209ENST00000592885 TPRXLQ17RH7 258 aa7.69□□□□□ -1.18
APOC1-209ENST00000592885 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.69□□□□□ -1.18
APOC1-209ENST00000592885 HIST1H2BHQ93079 126 aa7.69□□□□□ -1.18
APOC1-209ENST00000592885 HIST1H2BNQ99877 126 aa7.69□□□□□ -1.18
APOC1-209ENST00000592885 HIST1H2BMQ99879 126 aa7.69□□□□□ -1.18
APOC1-209ENST00000592885 HIGD2AQ9BW72 106 aa7.68□□□□□ -1.18
APOC1-209ENST00000592885 MEIG1Q5JSS6 88 aa7.67□□□□□ -1.18
APOC1-209ENST00000592885 SPAG11AQ6PDA7 123 aa7.67□□□□□ -1.18
APOC1-209ENST00000592885 LINC00337Q8N6G1 96 aa7.67□□□□□ -1.18
APOC1-209ENST00000592885 SPRR4Q96PI1 79 aa7.67□□□□□ -1.18
APOC1-209ENST00000592885 RETNLBQ9BQ08 111 aa7.67□□□□□ -1.18
APOC1-209ENST00000592885 MUC2Q02817 5179 aa7.67□□□□□ -1.18
APOC1-209ENST00000592885 S100A6P06703 90 aa7.66□□□□□ -1.18
APOC1-209ENST00000592885 SMIM13P0DJ93 91 aa7.66□□□□□ -1.18
APOC1-209ENST00000592885 COA6Q5JTJ3 125 aaKnown RBP7.66□□□□□ -1.18
APOC1-209ENST00000592885 A0A0U1RRA0 63 aa7.65□□□□□ -1.18
APOC1-209ENST00000592885 C5orf52A6NGY3 159 aa7.65□□□□□ -1.18
APOC1-209ENST00000592885 HSBP1O75506 76 aa7.65□□□□□ -1.18
APOC1-209ENST00000592885 SPRR1AP35321 89 aa7.65□□□□□ -1.18
APOC1-209ENST00000592885 LCE2AQ5TA79 106 aaPredicted RBP7.65□□□□□ -1.18
APOC1-209ENST00000592885 BOD1L2Q8IYS8 172 aa7.65□□□□□ -1.18
APOC1-209ENST00000592885 C3orf22Q8N5N4 141 aa7.65□□□□□ -1.18
APOC1-209ENST00000592885 MAP1LC3CQ9BXW4 147 aa7.65□□□□□ -1.18
APOC1-209ENST00000592885 KCNQ1DNQ9H478 68 aa7.65□□□□□ -1.18
APOC1-209ENST00000592885 IGLV7-46A0A075B6I9 117 aa7.64□□□□□ -1.19
APOC1-209ENST00000592885 MYMXA0A1B0GTQ4 84 aa7.64□□□□□ -1.19
APOC1-209ENST00000592885 S100A12P80511 92 aa7.64□□□□□ -1.19
APOC1-209ENST00000592885 MIR7-3HGQ8N6C7 128 aa7.64□□□□□ -1.19
APOC1-209ENST00000592885 CDIP1Q9H305 208 aa7.64□□□□□ -1.19
APOC1-209ENST00000592885 NDUFA12Q9UI09 145 aa7.64□□□□□ -1.19
APOC1-209ENST00000592885 LOC105371267A0A1B0GV96 52 aa7.63□□□□□ -1.19
APOC1-209ENST00000592885 NCR3O14931 201 aa7.63□□□□□ -1.19
APOC1-209ENST00000592885 SNRPEP62304 92 aaKnown RBP7.63□□□□□ -1.19
APOC1-209ENST00000592885 ETDCA0A1B0GVM5 59 aa7.62□□□□□ -1.19
APOC1-209ENST00000592885 FP248Q71RG6 208 aaPredicted RBP7.62□□□□□ -1.19
APOC1-209ENST00000592885 LOC107984156A0A0G2JMH3 177 aa7.61□□□□□ -1.19
APOC1-209ENST00000592885 KRTAP4-16G5E9R7 235 aaPredicted RBP7.61□□□□□ -1.19
APOC1-209ENST00000592885 PLNP26678 52 aa7.61□□□□□ -1.19
APOC1-209ENST00000592885 ARL17AQ8IVW1 177 aa7.61□□□□□ -1.19
APOC1-209ENST00000592885 LEPROTO15243 131 aa7.6□□□□□ -1.19
APOC1-209ENST00000592885 LEPROTL1O95214 131 aa7.6□□□□□ -1.19
APOC1-209ENST00000592885 HIST3H2BBQ8N257 126 aa7.6□□□□□ -1.19
APOC1-209ENST00000592885 FAM19A2Q8N3H0 131 aa7.6□□□□□ -1.19
APOC1-209ENST00000592885 TRBV10-3A0A0K0K1G6 114 aa7.59□□□□□ -1.19
APOC1-209ENST00000592885 TRBV10-2A0A0K0K1G8 114 aa7.59□□□□□ -1.19
APOC1-209ENST00000592885 LINC00310P59036 64 aa7.59□□□□□ -1.19
APOC1-209ENST00000592885 LINC00483Q53H64 154 aa7.59□□□□□ -1.19
APOC1-209ENST00000592885 LCE2CQ5TA81 110 aa7.59□□□□□ -1.19
APOC1-209ENST00000592885 PPDPFQ9H3Y8 114 aa7.59□□□□□ -1.19
APOC1-209ENST00000592885 H0Y8G0 127 aa7.58□□□□□ -1.2
APOC1-209ENST00000592885 SERF1AO75920 110 aa7.58□□□□□ -1.2
APOC1-209ENST00000592885 NMUP48645 174 aa7.58□□□□□ -1.2
APOC1-209ENST00000592885 Q8NBF4 154 aa7.58□□□□□ -1.2
APOC1-209ENST00000592885 SMCR5Q8TEV8 140 aa7.58□□□□□ -1.2
APOC1-209ENST00000592885 SPINK1P00995 79 aa7.57□□□□□ -1.2
APOC1-209ENST00000592885 TSPEAR-AS2P59090 65 aa7.57□□□□□ -1.2
APOC1-209ENST00000592885 HERVK_113P61574 105 aa7.57□□□□□ -1.2
APOC1-209ENST00000592885 SPANXB1Q9NS25 103 aaPredicted RBP7.57□□□□□ -1.2
APOC1-209ENST00000592885 HSPB8Q9UJY1 196 aa7.57□□□□□ -1.2
APOC1-209ENST00000592885 MUC17Q685J3 4493 aa7.56□□□□□ -1.2
APOC1-209ENST00000592885 B5MCH6 92 aa7.56□□□□□ -1.2
APOC1-209ENST00000592885 J3QQQ9 107 aa7.56□□□□□ -1.2
APOC1-209ENST00000592885 S100A2P29034 98 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms