RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 FN1P02751 2386 aaKnown RBP3.69□□□□□ -1.82
VMP1-215ENST00000592619 IGKV1D-37A0A075B6S9 117 aa3.68□□□□□ -1.82
VMP1-215ENST00000592619 IGKV1OR2-108A0A075B7D4 117 aa3.68□□□□□ -1.82
VMP1-215ENST00000592619 TRAV3A0A0B4J244 114 aa3.68□□□□□ -1.82
VMP1-215ENST00000592619 CRYM-AS1A6NIL9 109 aa3.68□□□□□ -1.82
VMP1-215ENST00000592619 H7BZZ5 65 aa3.68□□□□□ -1.82
VMP1-215ENST00000592619 CCL3L1P16619 93 aa3.68□□□□□ -1.82
VMP1-215ENST00000592619 FAM229BQ4G0N7 80 aa3.68□□□□□ -1.82
VMP1-215ENST00000592619 LYZL1Q6UWQ5 148 aa3.68□□□□□ -1.82
VMP1-215ENST00000592619 BRD3OSQ6XYD6 125 aa3.68□□□□□ -1.82
VMP1-215ENST00000592619 C14orf132Q9NPU4 83 aa3.68□□□□□ -1.82
VMP1-215ENST00000592619 ANK2Q01484 3957 aa3.68□□□□□ -1.82
VMP1-215ENST00000592619 ARHGAP32A7KAX9 2087 aa3.67□□□□□ -1.82
VMP1-215ENST00000592619 TLN2Q9Y4G6 2542 aa3.67□□□□□ -1.82
VMP1-215ENST00000592619 A0A087WSZ3 146 aa3.67□□□□□ -1.82
VMP1-215ENST00000592619 A0A0B4J2C4 111 aa3.67□□□□□ -1.82
VMP1-215ENST00000592619 ODF3BA8MYP8 253 aa3.67□□□□□ -1.82
VMP1-215ENST00000592619 C16orf90A8MZG2 172 aa3.67□□□□□ -1.82
VMP1-215ENST00000592619 H7C2G1 150 aa3.67□□□□□ -1.82
VMP1-215ENST00000592619 UBE2G1P62253 170 aa3.67□□□□□ -1.82
VMP1-215ENST00000592619 KLKP1Q107X0 134 aa3.67□□□□□ -1.82
VMP1-215ENST00000592619 C9orf116Q5BN46 136 aaPredicted RBP3.67□□□□□ -1.82
VMP1-215ENST00000592619 TMEM170BQ5T4T1 132 aa3.67□□□□□ -1.82
VMP1-215ENST00000592619 MINOS1Q5TGZ0 78 aa3.67□□□□□ -1.82
VMP1-215ENST00000592619 HCP5Q6MZN7 132 aa3.67□□□□□ -1.82
VMP1-215ENST00000592619 CYP2G1PQ6ZSU1 146 aa3.67□□□□□ -1.82
VMP1-215ENST00000592619 ABRACLQ9P1F3 81 aa3.67□□□□□ -1.82
VMP1-215ENST00000592619 MINOS1-NBL1R4GNA1 71 aa3.67□□□□□ -1.82
VMP1-215ENST00000592619 S4R3C0 116 aa3.67□□□□□ -1.82
VMP1-215ENST00000592619 CSPG4Q6UVK1 2322 aa3.67□□□□□ -1.82
VMP1-215ENST00000592619 MTORP42345 2549 aa3.67□□□□□ -1.82
VMP1-215ENST00000592619 CRPP02741 224 aa3.66□□□□□ -1.82
VMP1-215ENST00000592619 IL4P05112 153 aa3.66□□□□□ -1.82
VMP1-215ENST00000592619 DEFB112Q30KQ8 113 aa3.66□□□□□ -1.82
VMP1-215ENST00000592619 PSMG4Q5JS54 123 aa3.66□□□□□ -1.82
VMP1-215ENST00000592619 C6orf201Q7Z4U5 140 aa3.66□□□□□ -1.82
VMP1-215ENST00000592619 ARHGAP5-AS1Q96IT6 56 aa3.66□□□□□ -1.82
VMP1-215ENST00000592619 FBN1P35555 2871 aaKnown RBP3.65□□□□□ -1.82
VMP1-215ENST00000592619 NAV3Q8IVL0 2385 aa3.65□□□□□ -1.83
VMP1-215ENST00000592619 PRB2P02812 416 aaPredicted RBP3.65□□□□□ -1.83
VMP1-215ENST00000592619 ZNF22P17026 224 aaPredicted RBP3.65□□□□□ -1.83
VMP1-215ENST00000592619 MOBPQ13875 183 aa3.65□□□□□ -1.83
VMP1-215ENST00000592619 SETD2Q9BYW2 2564 aaPredicted RBP3.65□□□□□ -1.83
VMP1-215ENST00000592619 SONP18583 2426 aaKnown RBP3.65□□□□□ -1.83
VMP1-215ENST00000592619 WNK2Q9Y3S1 2297 aa3.64□□□□□ -1.83
VMP1-215ENST00000592619 TRBV7-1A0A0A6YYK4 115 aa3.64□□□□□ -1.83
VMP1-215ENST00000592619 TRBV10-3A0A0K0K1G6 114 aa3.64□□□□□ -1.83
VMP1-215ENST00000592619 E7EUB6 86 aa3.64□□□□□ -1.83
VMP1-215ENST00000592619 H3BUX3 64 aa3.64□□□□□ -1.83
VMP1-215ENST00000592619 IGHV3-53P01767 116 aa3.64□□□□□ -1.83
VMP1-215ENST00000592619 ZNF137PP52743 207 aa3.64□□□□□ -1.83
VMP1-215ENST00000592619 PRB3Q04118 309 aaPredicted RBP3.64□□□□□ -1.83
VMP1-215ENST00000592619 DEFB121Q5J5C9 76 aa3.64□□□□□ -1.83
VMP1-215ENST00000592619 RPL7L1Q6DKI1 246 aaKnown RBP3.64□□□□□ -1.83
VMP1-215ENST00000592619 CASC2Q6XLA1 102 aa3.64□□□□□ -1.83
VMP1-215ENST00000592619 ST20-AS1Q8NBB2 130 aa3.64□□□□□ -1.83
VMP1-215ENST00000592619 TIMM21Q9BVV7 248 aa3.64□□□□□ -1.83
VMP1-215ENST00000592619 CDC42SE1Q9NRR8 79 aa3.64□□□□□ -1.83
VMP1-215ENST00000592619 V9GYH0 126 aa3.64□□□□□ -1.83
VMP1-215ENST00000592619 C2CD3Q4AC94 2353 aa3.63□□□□□ -1.83
VMP1-215ENST00000592619 HCG22E2RYF7 251 aa3.63□□□□□ -1.83
VMP1-215ENST00000592619 COX8AP10176 69 aa3.63□□□□□ -1.83
VMP1-215ENST00000592619 LEAP2Q969E1 77 aa3.63□□□□□ -1.83
VMP1-215ENST00000592619 FAM167A-AS1Q96KT0 104 aa3.63□□□□□ -1.83
VMP1-215ENST00000592619 HILPDAQ9Y5L2 63 aa3.63□□□□□ -1.83
VMP1-215ENST00000592619 IGLV10-54A0A075B6I4 117 aa3.62□□□□□ -1.83
VMP1-215ENST00000592619 TRBV6-7A0A0A0MS04 114 aa3.62□□□□□ -1.83
VMP1-215ENST00000592619 H3BQ85 93 aa3.62□□□□□ -1.83
VMP1-215ENST00000592619 ZNF833PQ6ZTB9 187 aa3.62□□□□□ -1.83
VMP1-215ENST00000592619 TVP23CQ96ET8 276 aa3.62□□□□□ -1.83
VMP1-215ENST00000592619 KIAA2026Q5HYC2 2103 aa3.61□□□□□ -1.83
VMP1-215ENST00000592619 SNRPGP15A8MWD9 76 aa3.61□□□□□ -1.83
VMP1-215ENST00000592619 BAALC-AS2P0C853 105 aa3.61□□□□□ -1.83
VMP1-215ENST00000592619 SAA2P0DJI9 122 aaPredicted RBP3.61□□□□□ -1.83
VMP1-215ENST00000592619 DEFA4P12838 97 aa3.61□□□□□ -1.83
VMP1-215ENST00000592619 UBE2D3P61077 147 aa3.61□□□□□ -1.83
VMP1-215ENST00000592619 UBE2D2P62837 147 aa3.61□□□□□ -1.83
VMP1-215ENST00000592619 LY6EQ16553 131 aa3.61□□□□□ -1.83
VMP1-215ENST00000592619 SPANXN5Q5MJ07 72 aa3.61□□□□□ -1.83
VMP1-215ENST00000592619 C20orf166-AS1Q96NR2 134 aa3.61□□□□□ -1.83
VMP1-215ENST00000592619 CLPSL1A2RUU4 121 aa3.6□□□□□ -1.83
VMP1-215ENST00000592619 MGST1P10620 155 aaKnown RBP3.6□□□□□ -1.83
VMP1-215ENST00000592619 Q8N6K4 173 aa3.6□□□□□ -1.83
VMP1-215ENST00000592619 JMJD1CQ15652 2540 aa3.59□□□□□ -1.83
VMP1-215ENST00000592619 TRBV7-3A0A075B6L6 115 aa3.59□□□□□ -1.83
VMP1-215ENST00000592619 C11orf86A6NJI1 115 aa3.59□□□□□ -1.83
VMP1-215ENST00000592619 SSBP1Q04837 148 aaKnown RBP3.59□□□□□ -1.83
VMP1-215ENST00000592619 ZNF56Q15929 161 aa3.59□□□□□ -1.83
VMP1-215ENST00000592619 RPL39P5Q59GN2 51 aa3.59□□□□□ -1.83
VMP1-215ENST00000592619 C5orf56Q8N8D9 126 aa3.59□□□□□ -1.83
VMP1-215ENST00000592619 SPTSSBQ8NFR3 76 aa3.59□□□□□ -1.83
VMP1-215ENST00000592619 PRO1854Q9UHT4 67 aa3.59□□□□□ -1.83
VMP1-215ENST00000592619 ATRQ13535 2644 aa3.58□□□□□ -1.84
VMP1-215ENST00000592619 IGLV2-18A0A075B6J9 118 aa3.58□□□□□ -1.84
VMP1-215ENST00000592619 NDUFA3O95167 84 aa3.58□□□□□ -1.84
VMP1-215ENST00000592619 PPYP01298 95 aa3.58□□□□□ -1.84
VMP1-215ENST00000592619 IGLV7-43P04211 117 aa3.58□□□□□ -1.84
VMP1-215ENST00000592619 C3orf79P0CE67 100 aa3.58□□□□□ -1.84
VMP1-215ENST00000592619 MIFP14174 115 aa3.58□□□□□ -1.84
VMP1-215ENST00000592619 FAM223AQ8IWN6 122 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms