RNA–Protein interactions for RNA: ENST00000590898.5

RPRD1A-209, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best) BASIC

Gene RPRD1A, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-209ENST00000590898 SDIM1Q6ZPB5 146 aa10.99□□□□□ -0.65
RPRD1A-209ENST00000590898 DNAH8Q96JB1 4490 aa10.99□□□□□ -0.65
RPRD1A-209ENST00000590898 KRTAP10-1P60331 282 aa10.98□□□□□ -0.65
RPRD1A-209ENST00000590898 CIRBPQ14011 172 aaKnown RBP10.98□□□□□ -0.65
RPRD1A-209ENST00000590898 LINC01620Q4KN68 170 aa10.98□□□□□ -0.65
RPRD1A-209ENST00000590898 TMEM238LA0A1B0GVL6 79 aa10.97□□□□□ -0.65
RPRD1A-209ENST00000590898 A6NJY4 79 aa10.97□□□□□ -0.65
RPRD1A-209ENST00000590898 CFC1BP0CG36 223 aa10.97□□□□□ -0.65
RPRD1A-209ENST00000590898 CFC1P0CG37 223 aa10.97□□□□□ -0.65
RPRD1A-209ENST00000590898 SOSTDC1Q6X4U4 206 aa10.97□□□□□ -0.65
RPRD1A-209ENST00000590898 C6orf48Q9UBA6 75 aa10.97□□□□□ -0.65
RPRD1A-209ENST00000590898 H3BUT2 72 aa10.97□□□□□ -0.65
RPRD1A-209ENST00000590898 C9orf118A6NHY6 69 aa10.96□□□□□ -0.65
RPRD1A-209ENST00000590898 PFN2P35080 140 aa10.96□□□□□ -0.65
RPRD1A-209ENST00000590898 RPL24P83731 157 aaKnown RBP10.96□□□□□ -0.65
RPRD1A-209ENST00000590898 TLX1NBP0CAT3 122 aa10.96□□□□□ -0.66
RPRD1A-209ENST00000590898 LINC00308Q8TCZ7 52 aa10.96□□□□□ -0.66
RPRD1A-209ENST00000590898 LOC107984640A0A0U1RRK4 108 aa10.95□□□□□ -0.66
RPRD1A-209ENST00000590898 MIR7-3HGQ8N6C7 128 aa10.95□□□□□ -0.66
RPRD1A-209ENST00000590898 LINC00158P58513 81 aa10.94□□□□□ -0.66
RPRD1A-209ENST00000590898 C9orf116Q5BN46 136 aaPredicted RBP10.94□□□□□ -0.66
RPRD1A-209ENST00000590898 ERG28Q9UKR5 140 aa10.94□□□□□ -0.66
RPRD1A-209ENST00000590898 Q6ZSA8 131 aa10.94□□□□□ -0.66
RPRD1A-209ENST00000590898 LINC00474Q9P2X8 69 aa10.92□□□□□ -0.66
RPRD1A-209ENST00000590898 NDUFC2-KCTD14E9PQ53 114 aa10.92□□□□□ -0.66
RPRD1A-209ENST00000590898 IFITM1P13164 125 aa10.92□□□□□ -0.66
RPRD1A-209ENST00000590898 TSPAN13O95857 204 aa10.9□□□□□ -0.66
RPRD1A-209ENST00000590898 COX17Q14061 63 aa10.9□□□□□ -0.66
RPRD1A-209ENST00000590898 VAMP3Q15836 100 aa10.9□□□□□ -0.66
RPRD1A-209ENST00000590898 FAM30AQ9NZY2 134 aa10.9□□□□□ -0.66
RPRD1A-209ENST00000590898 A0A0B4J2C4 111 aa10.89□□□□□ -0.67
RPRD1A-209ENST00000590898 A0A1W2PPM0 123 aa10.89□□□□□ -0.67
RPRD1A-209ENST00000590898 Q6ZRP5 223 aa10.89□□□□□ -0.67
RPRD1A-209ENST00000590898 PRO1854Q9UHT4 67 aa10.89□□□□□ -0.67
RPRD1A-209ENST00000590898 APOBP04114 4563 aaKnown RBP10.89□□□□□ -0.67
RPRD1A-209ENST00000590898 A0A096LNI7 61 aa10.88□□□□□ -0.67
RPRD1A-209ENST00000590898 H7C2G1 150 aa10.88□□□□□ -0.67
RPRD1A-209ENST00000590898 RPL18AQ02543 176 aaKnown RBP10.88□□□□□ -0.67
RPRD1A-209ENST00000590898 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.88□□□□□ -0.67
RPRD1A-209ENST00000590898 CDK2AP2O75956 126 aa10.87□□□□□ -0.67
RPRD1A-209ENST00000590898 GAGE2BQ13066 116 aa10.87□□□□□ -0.67
RPRD1A-209ENST00000590898 SPACA4Q8TDM5 124 aa10.87□□□□□ -0.67
RPRD1A-209ENST00000590898 IGKV2-24A0A0C4DH68 120 aa10.86□□□□□ -0.67
RPRD1A-209ENST00000590898 PANO1I0J062 215 aa10.86□□□□□ -0.67
RPRD1A-209ENST00000590898 CHTF8P0CG12 524 aa10.86□□□□□ -0.67
RPRD1A-209ENST00000590898 DPH3Q96FX2 82 aa10.85□□□□□ -0.67
RPRD1A-209ENST00000590898 BIRC6Q9NR09 4857 aa10.85□□□□□ -0.67
RPRD1A-209ENST00000590898 XGP55808 180 aa10.84□□□□□ -0.67
RPRD1A-209ENST00000590898 GAGE2EQ4V326 116 aa10.84□□□□□ -0.67
RPRD1A-209ENST00000590898 GAGE2DQ9UEU5 116 aa10.84□□□□□ -0.67
RPRD1A-209ENST00000590898 SND1-IT1Q9HBX3 110 aa10.84□□□□□ -0.67
RPRD1A-209ENST00000590898 FABP2P12104 132 aa10.83□□□□□ -0.68
RPRD1A-209ENST00000590898 COPS9Q8WXC6 57 aa10.83□□□□□ -0.68
RPRD1A-209ENST00000590898 UBE2V1Q13404 147 aa10.82□□□□□ -0.68
RPRD1A-209ENST00000590898 SPCS1Q9Y6A9 102 aa10.82□□□□□ -0.68
RPRD1A-209ENST00000590898 IGKV2-28A0A075B6P5 120 aa10.82□□□□□ -0.68
RPRD1A-209ENST00000590898 A0A087WYN8 130 aa10.82□□□□□ -0.68
RPRD1A-209ENST00000590898 IGKV2D-28P01615 120 aa10.82□□□□□ -0.68
RPRD1A-209ENST00000590898 RPL13AP40429 203 aaKnown RBP10.82□□□□□ -0.68
RPRD1A-209ENST00000590898 CIRBP-AS1Q8TBR5 109 aa10.82□□□□□ -0.68
RPRD1A-209ENST00000590898 PLAC8Q9NZF1 115 aa10.82□□□□□ -0.68
RPRD1A-209ENST00000590898 EPM2AB3EWF7 344 aa10.81□□□□□ -0.68
RPRD1A-209ENST00000590898 SCXQ7RTU7 201 aa10.81□□□□□ -0.68
RPRD1A-209ENST00000590898 PPDPFQ9H3Y8 114 aa10.81□□□□□ -0.68
RPRD1A-209ENST00000590898 LOC107984156A0A0G2JMH3 177 aa10.8□□□□□ -0.68
RPRD1A-209ENST00000590898 K7EP34 96 aa10.8□□□□□ -0.68
RPRD1A-209ENST00000590898 Q1RN00 199 aa10.8□□□□□ -0.68
RPRD1A-209ENST00000590898 ARL17AQ8IVW1 177 aa10.8□□□□□ -0.68
RPRD1A-209ENST00000590898 Q8NDZ9 215 aa10.8□□□□□ -0.68
RPRD1A-209ENST00000590898 GAGE10A6NGK3 116 aa10.8□□□□□ -0.68
RPRD1A-209ENST00000590898 C9orf129Q5T035 196 aaKnown RBP10.8□□□□□ -0.68
RPRD1A-209ENST00000590898 LINC00337Q8N6G1 96 aa10.8□□□□□ -0.68
RPRD1A-209ENST00000590898 XAGE1AQ9HD64 81 aa10.79□□□□□ -0.68
RPRD1A-209ENST00000590898 HSPG2P98160 4391 aa10.78□□□□□ -0.68
RPRD1A-209ENST00000590898 KIAA1109Q2LD37 5005 aa10.78□□□□□ -0.68
RPRD1A-209ENST00000590898 RYR1P21817 5038 aa10.78□□□□□ -0.68
RPRD1A-209ENST00000590898 PRR3P79522 188 aaKnown RBP10.78□□□□□ -0.68
RPRD1A-209ENST00000590898 A0A1W2PNN7 141 aa10.77□□□□□ -0.69
RPRD1A-209ENST00000590898 PLA2G2DQ9UNK4 145 aa10.77□□□□□ -0.69
RPRD1A-209ENST00000590898 TRIAP1O43715 76 aa10.76□□□□□ -0.69
RPRD1A-209ENST00000590898 PSMB2P49721 201 aa10.76□□□□□ -0.69
RPRD1A-209ENST00000590898 GTF2H5Q6ZYL4 71 aa10.75□□□□□ -0.69
RPRD1A-209ENST00000590898 HAMPP81172 84 aa10.74□□□□□ -0.69
RPRD1A-209ENST00000590898 H3BMG7 143 aa10.74□□□□□ -0.69
RPRD1A-209ENST00000590898 FAM168BA1KXE4 195 aa10.73□□□□□ -0.69
RPRD1A-209ENST00000590898 TCL1BO95988 128 aa10.72□□□□□ -0.69
RPRD1A-209ENST00000590898 SCGB1C2P0DMR2 95 aa10.72□□□□□ -0.69
RPRD1A-209ENST00000590898 KRTAP7-1Q8IUC3 87 aa10.72□□□□□ -0.69
RPRD1A-209ENST00000590898 TRAV13-2A0A0B4J235 113 aa10.72□□□□□ -0.69
RPRD1A-209ENST00000590898 MTURNQ8N3F0 131 aa10.72□□□□□ -0.69
RPRD1A-209ENST00000590898 NCR3O14931 201 aa10.71□□□□□ -0.69
RPRD1A-209ENST00000590898 IGLV5-37A0A075B6J1 123 aa10.7□□□□□ -0.7
RPRD1A-209ENST00000590898 SERTAD4-AS1Q5TG53 156 aa10.7□□□□□ -0.7
RPRD1A-209ENST00000590898 FAM19A5Q7Z5A7 132 aaPredicted RBP10.7□□□□□ -0.7
RPRD1A-209ENST00000590898 OR13C6PQ8NH95 151 aa10.7□□□□□ -0.7
RPRD1A-209ENST00000590898 FAT1Q14517 4588 aa10.69□□□□□ -0.7
RPRD1A-209ENST00000590898 NDUFC2O95298 119 aa10.69□□□□□ -0.7
RPRD1A-209ENST00000590898 C22orf24Q9Y442 160 aa10.69□□□□□ -0.7
RPRD1A-209ENST00000590898 VPS13BQ7Z7G8 4022 aa10.69□□□□□ -0.7
RPRD1A-209ENST00000590898 CLEC2BQ92478 149 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms