RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 FAT4Q6V0I7 4981 aa12.55□□□□□ -0.4
DDX39A-215ENST00000590696 TPRXLQ17RH7 258 aa12.55□□□□□ -0.4
DDX39A-215ENST00000590696 C3orf22Q8N5N4 141 aa12.55□□□□□ -0.4
DDX39A-215ENST00000590696 CDIP1Q9H305 208 aa12.55□□□□□ -0.4
DDX39A-215ENST00000590696 TRAPPC1Q9Y5R8 145 aa12.55□□□□□ -0.4
DDX39A-215ENST00000590696 IGLV7-46A0A075B6I9 117 aa12.54□□□□□ -0.4
DDX39A-215ENST00000590696 CTAG1AP78358 180 aa12.54□□□□□ -0.4
DDX39A-215ENST00000590696 RHEBQ15382 184 aa12.54□□□□□ -0.4
DDX39A-215ENST00000590696 SFTA2Q6UW10 78 aa12.54□□□□□ -0.4
DDX39A-215ENST00000590696 COMMD7Q86VX2 200 aa12.54□□□□□ -0.4
DDX39A-215ENST00000590696 C10orf91Q5T1B1 145 aa12.53□□□□□ -0.4
DDX39A-215ENST00000590696 HIGD2AQ9BW72 106 aa12.53□□□□□ -0.4
DDX39A-215ENST00000590696 MUC17Q685J3 4493 aa12.53□□□□□ -0.4
DDX39A-215ENST00000590696 LINC00158P58513 81 aa12.52□□□□□ -0.41
DDX39A-215ENST00000590696 LCE2AQ5TA79 106 aaPredicted RBP12.51□□□□□ -0.41
DDX39A-215ENST00000590696 A0A0U1RRA0 63 aa12.49□□□□□ -0.41
DDX39A-215ENST00000590696 CHTOPQ9Y3Y2 248 aaKnown RBP12.49□□□□□ -0.41
DDX39A-215ENST00000590696 KRTAP9-2Q9BYQ4 174 aa12.48□□□□□ -0.41
DDX39A-215ENST00000590696 SPRR4Q96PI1 79 aa12.47□□□□□ -0.41
DDX39A-215ENST00000590696 PPDPFQ9H3Y8 114 aa12.47□□□□□ -0.41
DDX39A-215ENST00000590696 TMEM223A0PJW6 202 aa12.45□□□□□ -0.42
DDX39A-215ENST00000590696 SPAG11AQ6PDA7 123 aa12.45□□□□□ -0.42
DDX39A-215ENST00000590696 ATP6V1G1O75348 118 aa12.42□□□□□ -0.42
DDX39A-215ENST00000590696 SMIM13P0DJ93 91 aa12.42□□□□□ -0.42
DDX39A-215ENST00000590696 ZNF706Q9Y5V0 76 aaPredicted RBP12.42□□□□□ -0.42
DDX39A-215ENST00000590696 PRYO14603 147 aa12.41□□□□□ -0.42
DDX39A-215ENST00000590696 C4orf48Q5BLP8 95 aa12.41□□□□□ -0.42
DDX39A-215ENST00000590696 BOD1L2Q8IYS8 172 aa12.41□□□□□ -0.42
DDX39A-215ENST00000590696 TRAV12-1A0A0B4J245 112 aa12.4□□□□□ -0.42
DDX39A-215ENST00000590696 NCR3O14931 201 aa12.4□□□□□ -0.42
DDX39A-215ENST00000590696 MEIG1Q5JSS6 88 aa12.39□□□□□ -0.43
DDX39A-215ENST00000590696 IFI27L1Q96BM0 104 aa12.39□□□□□ -0.43
DDX39A-215ENST00000590696 MIR7-3HGQ8N6C7 128 aa12.38□□□□□ -0.43
DDX39A-215ENST00000590696 LINC00337Q8N6G1 96 aa12.38□□□□□ -0.43
DDX39A-215ENST00000590696 DAND5Q8N907 189 aa12.38□□□□□ -0.43
DDX39A-215ENST00000590696 APOC3P02656 99 aa12.37□□□□□ -0.43
DDX39A-215ENST00000590696 SPRR1AP35321 89 aa12.37□□□□□ -0.43
DDX39A-215ENST00000590696 FP248Q71RG6 208 aaPredicted RBP12.37□□□□□ -0.43
DDX39A-215ENST00000590696 Q8NBF4 154 aa12.37□□□□□ -0.43
DDX39A-215ENST00000590696 SMCR5Q8TEV8 140 aa12.37□□□□□ -0.43
DDX39A-215ENST00000590696 KCNQ1DNQ9H478 68 aa12.37□□□□□ -0.43
DDX39A-215ENST00000590696 CHCHD1Q96BP2 118 aaKnown RBP12.36□□□□□ -0.43
DDX39A-215ENST00000590696 ETDCA0A1B0GVM5 59 aa12.35□□□□□ -0.43
DDX39A-215ENST00000590696 HERV-K104P63124 156 aa12.35□□□□□ -0.43
DDX39A-215ENST00000590696 KRTAP4-16G5E9R7 235 aaPredicted RBP12.34□□□□□ -0.43
DDX39A-215ENST00000590696 SNAPINO95295 136 aa12.33□□□□□ -0.44
DDX39A-215ENST00000590696 TRBV10-3A0A0K0K1G6 114 aa12.32□□□□□ -0.44
DDX39A-215ENST00000590696 LINC00587B1AMM8 73 aa12.32□□□□□ -0.44
DDX39A-215ENST00000590696 NDUFA12Q9UI09 145 aa12.32□□□□□ -0.44
DDX39A-215ENST00000590696 SPINK1P00995 79 aa12.3□□□□□ -0.44
DDX39A-215ENST00000590696 KRTAP13-3Q3SY46 172 aa12.3□□□□□ -0.44
DDX39A-215ENST00000590696 SVBPQ8N300 66 aa12.3□□□□□ -0.44
DDX39A-215ENST00000590696 MYMXA0A1B0GTQ4 84 aa12.29□□□□□ -0.44
DDX39A-215ENST00000590696 NDUFA5Q16718 116 aa12.29□□□□□ -0.44
DDX39A-215ENST00000590696 LINC00483Q53H64 154 aa12.29□□□□□ -0.44
DDX39A-215ENST00000590696 MAP1LC3CQ9BXW4 147 aa12.29□□□□□ -0.44
DDX39A-215ENST00000590696 S100A12P80511 92 aa12.28□□□□□ -0.44
DDX39A-215ENST00000590696 GAGE2AQ6NT46 116 aa12.28□□□□□ -0.44
DDX39A-215ENST00000590696 FAM19A2Q8N3H0 131 aa12.28□□□□□ -0.44
DDX39A-215ENST00000590696 YPEL4Q96NS1 127 aa12.28□□□□□ -0.44
DDX39A-215ENST00000590696 B5MCH6 92 aa12.27□□□□□ -0.45
DDX39A-215ENST00000590696 HSBP1O75506 76 aa12.27□□□□□ -0.45
DDX39A-215ENST00000590696 H0Y8G0 127 aa12.26□□□□□ -0.45
DDX39A-215ENST00000590696 ERC2-IT1O76042 136 aa12.24□□□□□ -0.45
DDX39A-215ENST00000590696 TSPEAR-AS2P59090 65 aa12.24□□□□□ -0.45
DDX39A-215ENST00000590696 IGLV9-49A0A0B4J1Y8 123 aa12.23□□□□□ -0.45
DDX39A-215ENST00000590696 LOC107984156A0A0G2JMH3 177 aa12.23□□□□□ -0.45
DDX39A-215ENST00000590696 DDTP30046 118 aa12.23□□□□□ -0.45
DDX39A-215ENST00000590696 MOBPQ13875 183 aa12.23□□□□□ -0.45
DDX39A-215ENST00000590696 ASB16-AS1Q495Z4 193 aa12.23□□□□□ -0.45
DDX39A-215ENST00000590696 ARL17AQ8IVW1 177 aa12.23□□□□□ -0.45
DDX39A-215ENST00000590696 LEPROTO15243 131 aa12.22□□□□□ -0.45
DDX39A-215ENST00000590696 SSBP3-AS1Q7Z2R9 100 aa12.21□□□□□ -0.45
DDX39A-215ENST00000590696 TRBV10-2A0A0K0K1G8 114 aa12.2□□□□□ -0.46
DDX39A-215ENST00000590696 Q9BRP9 147 aa12.2□□□□□ -0.46
DDX39A-215ENST00000590696 Q8N377 158 aa12.19□□□□□ -0.46
DDX39A-215ENST00000590696 LEPROTL1O95214 131 aa12.18□□□□□ -0.46
DDX39A-215ENST00000590696 RPS29P62273 56 aaKnown RBP12.18□□□□□ -0.46
DDX39A-215ENST00000590696 Q6ZRX8 168 aa12.18□□□□□ -0.46
DDX39A-215ENST00000590696 J3QQQ9 107 aa12.17□□□□□ -0.46
DDX39A-215ENST00000590696 SPANXB1Q9NS25 103 aaPredicted RBP12.17□□□□□ -0.46
DDX39A-215ENST00000590696 PLNP26678 52 aa12.16□□□□□ -0.46
DDX39A-215ENST00000590696 SEC61BP60468 96 aaKnown RBP12.16□□□□□ -0.46
DDX39A-215ENST00000590696 MIEN1Q9BRT3 115 aa12.16□□□□□ -0.46
DDX39A-215ENST00000590696 KRTAP4-1Q9BYQ7 146 aa12.16□□□□□ -0.46
DDX39A-215ENST00000590696 KRTAP9-6A0A140TA67 174 aa12.15□□□□□ -0.46
DDX39A-215ENST00000590696 S100A7L2Q5SY68 101 aa12.15□□□□□ -0.46
DDX39A-215ENST00000590696 TRGC2P03986 189 aa12.14□□□□□ -0.47
DDX39A-215ENST00000590696 SLC25A20O43772 301 aa12.13□□□□□ -0.47
DDX39A-215ENST00000590696 SERF1AO75920 110 aa12.13□□□□□ -0.47
DDX39A-215ENST00000590696 NDUFC2O95298 119 aa12.13□□□□□ -0.47
DDX39A-215ENST00000590696 IGLV6-57P01721 117 aa12.13□□□□□ -0.47
DDX39A-215ENST00000590696 NMUP48645 174 aa12.13□□□□□ -0.47
DDX39A-215ENST00000590696 LINC00310P59036 64 aa12.13□□□□□ -0.47
DDX39A-215ENST00000590696 HERVK_113P61574 105 aa12.13□□□□□ -0.47
DDX39A-215ENST00000590696 DPM2O94777 84 aa12.12□□□□□ -0.47
DDX39A-215ENST00000590696 LGALS3P17931 250 aaKnown RBP12.12□□□□□ -0.47
DDX39A-215ENST00000590696 LINC01547P58512 204 aaPredicted RBP12.12□□□□□ -0.47
DDX39A-215ENST00000590696 PMCHL2Q9BQD1 86 aa12.12□□□□□ -0.47
DDX39A-215ENST00000590696 TRAV23DV6A0A075B6W5 121 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 171.3 ms