RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 TMEM223A0PJW6 202 aa10.11□□□□□ -0.79
RETREG3-210ENST00000590541 CBLN2Q8IUK8 224 aa10.11□□□□□ -0.79
RETREG3-210ENST00000590541 TYMSOSQ8TAI1 123 aa10.11□□□□□ -0.79
RETREG3-210ENST00000590541 VPREB1P12018 145 aa10.1□□□□□ -0.79
RETREG3-210ENST00000590541 CDIP1Q9H305 208 aa10.1□□□□□ -0.79
RETREG3-210ENST00000590541 UBE2AP49459 152 aa10.09□□□□□ -0.79
RETREG3-210ENST00000590541 TPRXLQ17RH7 258 aa10.09□□□□□ -0.79
RETREG3-210ENST00000590541 LINC00587B1AMM8 73 aa10.08□□□□□ -0.8
RETREG3-210ENST00000590541 TRGC2P03986 189 aa10.08□□□□□ -0.8
RETREG3-210ENST00000590541 CRYGAP11844 174 aa10.08□□□□□ -0.8
RETREG3-210ENST00000590541 LINC00158P58513 81 aa10.08□□□□□ -0.8
RETREG3-210ENST00000590541 CRCT1Q9UGL9 99 aa10.08□□□□□ -0.8
RETREG3-210ENST00000590541 IGKV2-28A0A075B6P5 120 aa10.07□□□□□ -0.8
RETREG3-210ENST00000590541 IGKV2D-28P01615 120 aa10.07□□□□□ -0.8
RETREG3-210ENST00000590541 HERV-K104P63124 156 aa10.07□□□□□ -0.8
RETREG3-210ENST00000590541 KRTAP13-1Q8IUC0 172 aa10.07□□□□□ -0.8
RETREG3-210ENST00000590541 FAM19A2Q8N3H0 131 aa10.07□□□□□ -0.8
RETREG3-210ENST00000590541 LEPROTL1O95214 131 aa10.06□□□□□ -0.8
RETREG3-210ENST00000590541 ATP6V1G1O75348 118 aa10.05□□□□□ -0.8
RETREG3-210ENST00000590541 ANAPC11Q9NYG5 84 aa10.05□□□□□ -0.8
RETREG3-210ENST00000590541 FSIP2Q5CZC0 6907 aa10.05□□□□□ -0.8
RETREG3-210ENST00000590541 SCO1O75880 301 aa10.04□□□□□ -0.8
RETREG3-210ENST00000590541 KRTAP13-2Q52LG2 175 aa10.04□□□□□ -0.8
RETREG3-210ENST00000590541 TMEM126AQ9H061 195 aa10.04□□□□□ -0.8
RETREG3-210ENST00000590541 HSPB8Q9UJY1 196 aa10.04□□□□□ -0.8
RETREG3-210ENST00000590541 SERF1AO75920 110 aa10.03□□□□□ -0.8
RETREG3-210ENST00000590541 PLNP26678 52 aa10.03□□□□□ -0.8
RETREG3-210ENST00000590541 FAM229BQ4G0N7 80 aa10.03□□□□□ -0.8
RETREG3-210ENST00000590541 IGLV7-46A0A075B6I9 117 aa10.02□□□□□ -0.81
RETREG3-210ENST00000590541 MYMXA0A1B0GTQ4 84 aa10.02□□□□□ -0.81
RETREG3-210ENST00000590541 FAM19A1Q7Z5A9 133 aa10.02□□□□□ -0.81
RETREG3-210ENST00000590541 MAP1LC3CQ9BXW4 147 aa10.02□□□□□ -0.81
RETREG3-210ENST00000590541 M0R378 163 aa10.01□□□□□ -0.81
RETREG3-210ENST00000590541 MEIG1Q5JSS6 88 aa10.01□□□□□ -0.81
RETREG3-210ENST00000590541 SLC7A5P1Q8MH63 180 aa10.01□□□□□ -0.81
RETREG3-210ENST00000590541 NDUFA12Q9UI09 145 aa10.01□□□□□ -0.81
RETREG3-210ENST00000590541 SMIM13P0DJ93 91 aa10□□□□□ -0.81
RETREG3-210ENST00000590541 IGKV2D-26A0A0A0MRZ7 120 aa9.99□□□□□ -0.81
RETREG3-210ENST00000590541 A0A0U1RRA0 63 aa9.99□□□□□ -0.81
RETREG3-210ENST00000590541 COLCA2A8K830 154 aa9.99□□□□□ -0.81
RETREG3-210ENST00000590541 TMEM238C9JI98 176 aa9.99□□□□□ -0.81
RETREG3-210ENST00000590541 H0Y8G0 127 aa9.99□□□□□ -0.81
RETREG3-210ENST00000590541 LINC00310P59036 64 aa9.99□□□□□ -0.81
RETREG3-210ENST00000590541 LINC00304Q8N9R0 145 aa9.99□□□□□ -0.81
RETREG3-210ENST00000590541 Q8NDZ9 215 aa9.99□□□□□ -0.81
RETREG3-210ENST00000590541 PLEKHB2Q96CS7 222 aa9.99□□□□□ -0.81
RETREG3-210ENST00000590541 LEPROTO15243 131 aa9.98□□□□□ -0.81
RETREG3-210ENST00000590541 HERVK_113P61574 105 aa9.98□□□□□ -0.81
RETREG3-210ENST00000590541 PRLHP81277 87 aa9.98□□□□□ -0.81
RETREG3-210ENST00000590541 DPM2O94777 84 aa9.97□□□□□ -0.81
RETREG3-210ENST00000590541 BOD1L2Q8IYS8 172 aa9.97□□□□□ -0.81
RETREG3-210ENST00000590541 MIR7-3HGQ8N6C7 128 aa9.97□□□□□ -0.81
RETREG3-210ENST00000590541 NMUP48645 174 aa9.96□□□□□ -0.82
RETREG3-210ENST00000590541 CTAG1AP78358 180 aa9.96□□□□□ -0.82
RETREG3-210ENST00000590541 PRYO14603 147 aa9.95□□□□□ -0.82
RETREG3-210ENST00000590541 FABP4P15090 132 aa9.95□□□□□ -0.82
RETREG3-210ENST00000590541 LOC107984156A0A0G2JMH3 177 aa9.94□□□□□ -0.82
RETREG3-210ENST00000590541 IGKCP01834 107 aa9.94□□□□□ -0.82
RETREG3-210ENST00000590541 LINC01547P58512 204 aaPredicted RBP9.94□□□□□ -0.82
RETREG3-210ENST00000590541 S100A12P80511 92 aa9.94□□□□□ -0.82
RETREG3-210ENST00000590541 ARL17AQ8IVW1 177 aa9.94□□□□□ -0.82
RETREG3-210ENST00000590541 PPDPFQ9H3Y8 114 aa9.94□□□□□ -0.82
RETREG3-210ENST00000590541 J3QQQ9 107 aa9.93□□□□□ -0.82
RETREG3-210ENST00000590541 KCNQ1DNQ9H478 68 aa9.93□□□□□ -0.82
RETREG3-210ENST00000590541 LINC00337Q8N6G1 96 aa9.92□□□□□ -0.82
RETREG3-210ENST00000590541 LGALS3P17931 250 aaKnown RBP9.91□□□□□ -0.82
RETREG3-210ENST00000590541 HIGD2AQ9BW72 106 aa9.91□□□□□ -0.82
RETREG3-210ENST00000590541 ZNF706Q9Y5V0 76 aaPredicted RBP9.91□□□□□ -0.82
RETREG3-210ENST00000590541 SPRR1AP35321 89 aa9.9□□□□□ -0.82
RETREG3-210ENST00000590541 TSPEAR-AS2P59090 65 aa9.9□□□□□ -0.82
RETREG3-210ENST00000590541 KRTAP4-1Q9BYQ7 146 aa9.9□□□□□ -0.82
RETREG3-210ENST00000590541 TRBV10-2A0A0K0K1G8 114 aa9.89□□□□□ -0.83
RETREG3-210ENST00000590541 NCR3O14931 201 aa9.89□□□□□ -0.83
RETREG3-210ENST00000590541 MIEN1Q9BRT3 115 aa9.89□□□□□ -0.83
RETREG3-210ENST00000590541 ETDCA0A1B0GVM5 59 aa9.87□□□□□ -0.83
RETREG3-210ENST00000590541 ASB16-AS1Q495Z4 193 aa9.87□□□□□ -0.83
RETREG3-210ENST00000590541 SPRR4Q96PI1 79 aa9.87□□□□□ -0.83
RETREG3-210ENST00000590541 PMCHL2Q9BQD1 86 aa9.87□□□□□ -0.83
RETREG3-210ENST00000590541 TRBV10-3A0A0K0K1G6 114 aa9.86□□□□□ -0.83
RETREG3-210ENST00000590541 E9PLD3 99 aa9.86□□□□□ -0.83
RETREG3-210ENST00000590541 KRTAP4-16G5E9R7 235 aaPredicted RBP9.86□□□□□ -0.83
RETREG3-210ENST00000590541 HIST1H2BKO60814 126 aa9.86□□□□□ -0.83
RETREG3-210ENST00000590541 NDUFC2O95298 119 aa9.86□□□□□ -0.83
RETREG3-210ENST00000590541 HIST1H2BJP06899 126 aa9.86□□□□□ -0.83
RETREG3-210ENST00000590541 HIST1H2BOP23527 126 aa9.86□□□□□ -0.83
RETREG3-210ENST00000590541 HIST1H2BBP33778 126 aa9.86□□□□□ -0.83
RETREG3-210ENST00000590541 HIST1H2BDP58876 126 aa9.86□□□□□ -0.83
RETREG3-210ENST00000590541 HIST1H2BCP62807 126 aa9.86□□□□□ -0.83
RETREG3-210ENST00000590541 HIST2H2BEQ16778 126 aa9.86□□□□□ -0.83
RETREG3-210ENST00000590541 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.86□□□□□ -0.83
RETREG3-210ENST00000590541 HIST1H2BHQ93079 126 aa9.86□□□□□ -0.83
RETREG3-210ENST00000590541 HIST1H2BNQ99877 126 aa9.86□□□□□ -0.83
RETREG3-210ENST00000590541 HIST1H2BMQ99879 126 aa9.86□□□□□ -0.83
RETREG3-210ENST00000590541 SPANXB1Q9NS25 103 aaPredicted RBP9.85□□□□□ -0.83
RETREG3-210ENST00000590541 SYS1-DBNDD2H3BUS1 97 aa9.84□□□□□ -0.83
RETREG3-210ENST00000590541 DDTP30046 118 aa9.84□□□□□ -0.83
RETREG3-210ENST00000590541 SPAG11AQ6PDA7 123 aa9.84□□□□□ -0.83
RETREG3-210ENST00000590541 DAND5Q8N907 189 aa9.84□□□□□ -0.83
RETREG3-210ENST00000590541 KRTAP13-3Q3SY46 172 aa9.82□□□□□ -0.84
RETREG3-210ENST00000590541 SMCR5Q8TEV8 140 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms