RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 VPREB1P12018 145 aa7.27□□□□□ -1.25
TPM4-212ENST00000590180 PMCHL2Q9BQD1 86 aa7.27□□□□□ -1.25
TPM4-212ENST00000590180 MYMXA0A1B0GTQ4 84 aa7.26□□□□□ -1.25
TPM4-212ENST00000590180 PLNP26678 52 aa7.26□□□□□ -1.25
TPM4-212ENST00000590180 UBE2AP49459 152 aa7.26□□□□□ -1.25
TPM4-212ENST00000590180 MAP1LC3CQ9BXW4 147 aa7.26□□□□□ -1.25
TPM4-212ENST00000590180 NDUFA12Q9UI09 145 aa7.26□□□□□ -1.25
TPM4-212ENST00000590180 IGLV1-50A0A075B6I6 118 aa7.25□□□□□ -1.25
TPM4-212ENST00000590180 LINC00587B1AMM8 73 aa7.25□□□□□ -1.25
TPM4-212ENST00000590180 LEPROTO15243 131 aa7.25□□□□□ -1.25
TPM4-212ENST00000590180 DPM2O94777 84 aa7.25□□□□□ -1.25
TPM4-212ENST00000590180 KRTAP1-4P0C5Y4 121 aa7.25□□□□□ -1.25
TPM4-212ENST00000590180 HERV-K104P63124 156 aa7.25□□□□□ -1.25
TPM4-212ENST00000590180 PLEKHB2Q96CS7 222 aa7.25□□□□□ -1.25
TPM4-212ENST00000590180 HIST1H2BKO60814 126 aa7.24□□□□□ -1.25
TPM4-212ENST00000590180 IGKCP01834 107 aa7.24□□□□□ -1.25
TPM4-212ENST00000590180 HIST1H2BJP06899 126 aa7.24□□□□□ -1.25
TPM4-212ENST00000590180 HIST1H2BOP23527 126 aa7.24□□□□□ -1.25
TPM4-212ENST00000590180 HIST1H2BBP33778 126 aa7.24□□□□□ -1.25
TPM4-212ENST00000590180 HIST1H2BDP58876 126 aa7.24□□□□□ -1.25
TPM4-212ENST00000590180 HERVK_113P61574 105 aa7.24□□□□□ -1.25
TPM4-212ENST00000590180 HIST1H2BCP62807 126 aa7.24□□□□□ -1.25
TPM4-212ENST00000590180 HIST2H2BEQ16778 126 aa7.24□□□□□ -1.25
TPM4-212ENST00000590180 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.24□□□□□ -1.25
TPM4-212ENST00000590180 HIST1H2BHQ93079 126 aa7.24□□□□□ -1.25
TPM4-212ENST00000590180 HIST1H2BNQ99877 126 aa7.24□□□□□ -1.25
TPM4-212ENST00000590180 HIST1H2BMQ99879 126 aa7.24□□□□□ -1.25
TPM4-212ENST00000590180 HMCN2Q8NDA2 5059 aa7.24□□□□□ -1.25
TPM4-212ENST00000590180 FAM19A1Q7Z5A9 133 aa7.23□□□□□ -1.25
TPM4-212ENST00000590180 MIR7-3HGQ8N6C7 128 aa7.23□□□□□ -1.25
TPM4-212ENST00000590180 Q8NDZ9 215 aa7.23□□□□□ -1.25
TPM4-212ENST00000590180 TMEM238C9JI98 176 aa7.22□□□□□ -1.25
TPM4-212ENST00000590180 RPL13AP40429 203 aaKnown RBP7.22□□□□□ -1.25
TPM4-212ENST00000590180 BOD1L2Q8IYS8 172 aa7.22□□□□□ -1.25
TPM4-212ENST00000590180 TMEM126AQ9H061 195 aa7.22□□□□□ -1.25
TPM4-212ENST00000590180 J3QQQ9 107 aa7.21□□□□□ -1.26
TPM4-212ENST00000590180 M0R378 163 aa7.21□□□□□ -1.26
TPM4-212ENST00000590180 LGALS3P17931 250 aaKnown RBP7.21□□□□□ -1.26
TPM4-212ENST00000590180 TSPEAR-AS2P59090 65 aa7.21□□□□□ -1.26
TPM4-212ENST00000590180 PRLHP81277 87 aa7.2□□□□□ -1.26
TPM4-212ENST00000590180 SYS1-DBNDD2H3BUS1 97 aa7.19□□□□□ -1.26
TPM4-212ENST00000590180 NCR3O14931 201 aa7.19□□□□□ -1.26
TPM4-212ENST00000590180 CRYGAP11844 174 aa7.19□□□□□ -1.26
TPM4-212ENST00000590180 KRTAP13-1Q8IUC0 172 aa7.19□□□□□ -1.26
TPM4-212ENST00000590180 DAND5Q8N907 189 aa7.19□□□□□ -1.26
TPM4-212ENST00000590180 ANAPC11Q9NYG5 84 aa7.19□□□□□ -1.26
TPM4-212ENST00000590180 NMUP48645 174 aa7.18□□□□□ -1.26
TPM4-212ENST00000590180 A0A087X002 238 aa7.16□□□□□ -1.26
TPM4-212ENST00000590180 PET117Q6UWS5 81 aa7.16□□□□□ -1.26
TPM4-212ENST00000590180 TYMSOSQ8TAI1 123 aa7.16□□□□□ -1.26
TPM4-212ENST00000590180 HIGD2AQ9BW72 106 aa7.16□□□□□ -1.26
TPM4-212ENST00000590180 IGKV2D-26A0A0A0MRZ7 120 aa7.15□□□□□ -1.26
TPM4-212ENST00000590180 E9PLD3 99 aa7.15□□□□□ -1.26
TPM4-212ENST00000590180 TSPAN13O95857 204 aa7.15□□□□□ -1.26
TPM4-212ENST00000590180 MIEN1Q9BRT3 115 aa7.15□□□□□ -1.26
TPM4-212ENST00000590180 PRYO14603 147 aa7.14□□□□□ -1.27
TPM4-212ENST00000590180 S100A12P80511 92 aa7.14□□□□□ -1.27
TPM4-212ENST00000590180 LINC01545Q5VT33 79 aa7.14□□□□□ -1.27
TPM4-212ENST00000590180 LOC107984156A0A0G2JMH3 177 aa7.13□□□□□ -1.27
TPM4-212ENST00000590180 A0A0J9YXY3 114 aa7.13□□□□□ -1.27
TPM4-212ENST00000590180 TRBV10-3A0A0K0K1G6 114 aa7.13□□□□□ -1.27
TPM4-212ENST00000590180 C3orf79P0CE67 100 aa7.13□□□□□ -1.27
TPM4-212ENST00000590180 KRTDAPP60985 99 aa7.13□□□□□ -1.27
TPM4-212ENST00000590180 NPC2P61916 151 aa7.13□□□□□ -1.27
TPM4-212ENST00000590180 FAM229BQ4G0N7 80 aa7.13□□□□□ -1.27
TPM4-212ENST00000590180 COA6Q5JTJ3 125 aaKnown RBP7.13□□□□□ -1.27
TPM4-212ENST00000590180 ARL17AQ8IVW1 177 aa7.13□□□□□ -1.27
TPM4-212ENST00000590180 KCNQ1DNQ9H478 68 aa7.13□□□□□ -1.27
TPM4-212ENST00000590180 ETDCA0A1B0GVM5 59 aa7.12□□□□□ -1.27
TPM4-212ENST00000590180 ADAMTSL4-AS1Q5T5F5 129 aa7.12□□□□□ -1.27
TPM4-212ENST00000590180 DDTP30046 118 aa7.11□□□□□ -1.27
TPM4-212ENST00000590180 PRR4Q16378 134 aa7.11□□□□□ -1.27
TPM4-212ENST00000590180 KRTAP13-2Q52LG2 175 aa7.11□□□□□ -1.27
TPM4-212ENST00000590180 LINC00337Q8N6G1 96 aa7.11□□□□□ -1.27
TPM4-212ENST00000590180 UBR4Q5T4S7 5183 aa7.11□□□□□ -1.27
TPM4-212ENST00000590180 TRBV10-2A0A0K0K1G8 114 aa7.1□□□□□ -1.27
TPM4-212ENST00000590180 S100A7L2Q5SY68 101 aa7.1□□□□□ -1.27
TPM4-212ENST00000590180 SMCR5Q8TEV8 140 aa7.1□□□□□ -1.27
TPM4-212ENST00000590180 C20orf202A1L168 122 aa7.09□□□□□ -1.27
TPM4-212ENST00000590180 ZNF815PA8K554 130 aa7.09□□□□□ -1.27
TPM4-212ENST00000590180 NDUFC2O95298 119 aa7.09□□□□□ -1.27
TPM4-212ENST00000590180 SPRR1AP35321 89 aa7.09□□□□□ -1.27
TPM4-212ENST00000590180 SPANXB1Q9NS25 103 aaPredicted RBP7.09□□□□□ -1.27
TPM4-212ENST00000590180 S100A1P23297 94 aa7.08□□□□□ -1.28
TPM4-212ENST00000590180 SOSTDC1Q6X4U4 206 aa7.08□□□□□ -1.28
TPM4-212ENST00000590180 SPRR4Q96PI1 79 aa7.08□□□□□ -1.28
TPM4-212ENST00000590180 ZNF706Q9Y5V0 76 aaPredicted RBP7.08□□□□□ -1.28
TPM4-212ENST00000590180 LRP2P98164 4655 aa7.07□□□□□ -1.28
TPM4-212ENST00000590180 KRTAP4-16G5E9R7 235 aaPredicted RBP7.07□□□□□ -1.28
TPM4-212ENST00000590180 EIF4EBP3O60516 100 aaPredicted RBP7.07□□□□□ -1.28
TPM4-212ENST00000590180 LINC00304Q8N9R0 145 aa7.07□□□□□ -1.28
TPM4-212ENST00000590180 TTTY13Q9BZ97 58 aa7.07□□□□□ -1.28
TPM4-212ENST00000590180 PPDPFQ9H3Y8 114 aa7.07□□□□□ -1.28
TPM4-212ENST00000590180 B5MCH6 92 aa7.06□□□□□ -1.28
TPM4-212ENST00000590180 C3orf22Q8N5N4 141 aa7.06□□□□□ -1.28
TPM4-212ENST00000590180 LINC00308Q8TCZ7 52 aa7.06□□□□□ -1.28
TPM4-212ENST00000590180 TIMM17BO60830 172 aa7.05□□□□□ -1.28
TPM4-212ENST00000590180 IGLV6-57P01721 117 aa7.05□□□□□ -1.28
TPM4-212ENST00000590180 ATOH7Q8N100 152 aa7.05□□□□□ -1.28
TPM4-212ENST00000590180 OR13C6PQ8NH95 151 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms