RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 CFC1P0CG37 223 aa11.32□□□□□ -0.6
CXXC1-212ENST00000589940 Q6ZRP5 223 aa11.31□□□□□ -0.6
CXXC1-212ENST00000589940 HECTD4Q9Y4D8 3996 aa11.31□□□□□ -0.6
CXXC1-212ENST00000589940 VPS25Q9BRG1 176 aa11.3□□□□□ -0.6
CXXC1-212ENST00000589940 A0A0B4J2C4 111 aa11.29□□□□□ -0.6
CXXC1-212ENST00000589940 XAGE1AQ9HD64 81 aa11.29□□□□□ -0.6
CXXC1-212ENST00000589940 RPL18AQ02543 176 aaKnown RBP11.28□□□□□ -0.6
CXXC1-212ENST00000589940 VAMP3Q15836 100 aa11.28□□□□□ -0.6
CXXC1-212ENST00000589940 GAGE2EQ4V326 116 aa11.28□□□□□ -0.6
CXXC1-212ENST00000589940 GAGE2DQ9UEU5 116 aa11.28□□□□□ -0.6
CXXC1-212ENST00000589940 RAB37Q96AX2 223 aa11.28□□□□□ -0.6
CXXC1-212ENST00000589940 LOC107984640A0A0U1RRK4 108 aa11.27□□□□□ -0.61
CXXC1-212ENST00000589940 RTL8CO15255 209 aa11.27□□□□□ -0.61
CXXC1-212ENST00000589940 TAX1BP3O14907 124 aa11.27□□□□□ -0.61
CXXC1-212ENST00000589940 NDUFC2O95298 119 aa11.26□□□□□ -0.61
CXXC1-212ENST00000589940 OCIAD2Q56VL3 154 aa11.26□□□□□ -0.61
CXXC1-212ENST00000589940 PRO1854Q9UHT4 67 aa11.26□□□□□ -0.61
CXXC1-212ENST00000589940 TNP2Q05952 138 aa11.25□□□□□ -0.61
CXXC1-212ENST00000589940 C9orf163Q8N9P6 203 aa11.25□□□□□ -0.61
CXXC1-212ENST00000589940 IGKV2-28A0A075B6P5 120 aa11.24□□□□□ -0.61
CXXC1-212ENST00000589940 IGKV2D-28P01615 120 aa11.24□□□□□ -0.61
CXXC1-212ENST00000589940 FAT2Q9NYQ8 4349 aa11.24□□□□□ -0.61
CXXC1-212ENST00000589940 KMT2CQ8NEZ4 4911 aaKnown RBP11.24□□□□□ -0.61
CXXC1-212ENST00000589940 Q8NDZ9 215 aa11.24□□□□□ -0.61
CXXC1-212ENST00000589940 C9orf129Q5T035 196 aaKnown RBP11.23□□□□□ -0.61
CXXC1-212ENST00000589940 RYR2Q92736 4967 aa11.23□□□□□ -0.61
CXXC1-212ENST00000589940 GAGE2BQ13066 116 aa11.23□□□□□ -0.61
CXXC1-212ENST00000589940 DNAH11Q96DT5 4516 aa11.22□□□□□ -0.61
CXXC1-212ENST00000589940 PGPEP1Q9NXJ5 209 aa11.22□□□□□ -0.61
CXXC1-212ENST00000589940 TRAV13-2A0A0B4J235 113 aa11.21□□□□□ -0.61
CXXC1-212ENST00000589940 LINC00337Q8N6G1 96 aa11.21□□□□□ -0.61
CXXC1-212ENST00000589940 PRR3P79522 188 aaKnown RBP11.21□□□□□ -0.62
CXXC1-212ENST00000589940 PKIGQ9Y2B9 76 aa11.21□□□□□ -0.62
CXXC1-212ENST00000589940 C9orf118A6NHY6 69 aa11.2□□□□□ -0.62
CXXC1-212ENST00000589940 C16orf90A8MZG2 172 aa11.2□□□□□ -0.62
CXXC1-212ENST00000589940 RPL13AP40429 203 aaKnown RBP11.2□□□□□ -0.62
CXXC1-212ENST00000589940 K7ERU9 68 aa11.19□□□□□ -0.62
CXXC1-212ENST00000589940 TSPAN13O95857 204 aa11.19□□□□□ -0.62
CXXC1-212ENST00000589940 A0A096LNI7 61 aa11.19□□□□□ -0.62
CXXC1-212ENST00000589940 H7C2G1 150 aa11.19□□□□□ -0.62
CXXC1-212ENST00000589940 VPREB1P12018 145 aa11.19□□□□□ -0.62
CXXC1-212ENST00000589940 NCR3O14931 201 aa11.18□□□□□ -0.62
CXXC1-212ENST00000589940 LINC01620Q4KN68 170 aa11.18□□□□□ -0.62
CXXC1-212ENST00000589940 NAA38Q9BRA0 125 aaKnown RBP11.18□□□□□ -0.62
CXXC1-212ENST00000589940 H3BUT2 72 aa11.17□□□□□ -0.62
CXXC1-212ENST00000589940 SDIM1Q6ZPB5 146 aa11.17□□□□□ -0.62
CXXC1-212ENST00000589940 TRBV10-2A0A0K0K1G8 114 aa11.17□□□□□ -0.62
CXXC1-212ENST00000589940 Q1RN00 199 aa11.17□□□□□ -0.62
CXXC1-212ENST00000589940 PLA2G2DQ9UNK4 145 aa11.17□□□□□ -0.62
CXXC1-212ENST00000589940 IGLV5-52A0A0A0MRZ9 124 aa11.16□□□□□ -0.62
CXXC1-212ENST00000589940 IGKV2-24A0A0C4DH68 120 aa11.16□□□□□ -0.62
CXXC1-212ENST00000589940 FUSP35637 526 aaKnown RBP eCLIP11.16□□□□□ -0.62
CXXC1-212ENST00000589940 OR13C6PQ8NH95 151 aa11.16□□□□□ -0.62
CXXC1-212ENST00000589940 SERTAD4-AS1Q5TG53 156 aa11.15□□□□□ -0.63
CXXC1-212ENST00000589940 DNAH5Q8TE73 4624 aa11.14□□□□□ -0.63
CXXC1-212ENST00000589940 FAM168BA1KXE4 195 aa11.13□□□□□ -0.63
CXXC1-212ENST00000589940 TMEM126AQ9H061 195 aa11.13□□□□□ -0.63
CXXC1-212ENST00000589940 PKD1P98161 4303 aa11.13□□□□□ -0.63
CXXC1-212ENST00000589940 S100A7L2Q5SY68 101 aa11.13□□□□□ -0.63
CXXC1-212ENST00000589940 A0A1W2PPM0 123 aa11.12□□□□□ -0.63
CXXC1-212ENST00000589940 M0R378 163 aa11.12□□□□□ -0.63
CXXC1-212ENST00000589940 NKAPP1Q8N9T2 125 aa11.12□□□□□ -0.63
CXXC1-212ENST00000589940 LINC00474Q9P2X8 69 aa11.12□□□□□ -0.63
CXXC1-212ENST00000589940 IGLV5-37A0A075B6J1 123 aa11.12□□□□□ -0.63
CXXC1-212ENST00000589940 CHTF8P0CG12 524 aa11.12□□□□□ -0.63
CXXC1-212ENST00000589940 IGLV6-57P01721 117 aa11.11□□□□□ -0.63
CXXC1-212ENST00000589940 PSMB2P49721 201 aa11.11□□□□□ -0.63
CXXC1-212ENST00000589940 KRTAP10-2P60368 255 aa11.11□□□□□ -0.63
CXXC1-212ENST00000589940 KRTAP7-1Q8IUC3 87 aa11.11□□□□□ -0.63
CXXC1-212ENST00000589940 LINC00336Q6ZUF6 198 aa11.11□□□□□ -0.63
CXXC1-212ENST00000589940 FAM19A5Q7Z5A7 132 aaPredicted RBP11.11□□□□□ -0.63
CXXC1-212ENST00000589940 TRIAP1O43715 76 aa11.09□□□□□ -0.63
CXXC1-212ENST00000589940 FABP2P12104 132 aa11.09□□□□□ -0.63
CXXC1-212ENST00000589940 RPL28P46779 137 aaKnown RBP11.09□□□□□ -0.63
CXXC1-212ENST00000589940 SMIM11BQ8TCY0 68 aa11.09□□□□□ -0.63
CXXC1-212ENST00000589940 TRBV10-3A0A0K0K1G6 114 aa11.08□□□□□ -0.64
CXXC1-212ENST00000589940 C22orf24Q9Y442 160 aa11.08□□□□□ -0.64
CXXC1-212ENST00000589940 A0A1W2PNN7 141 aa11.07□□□□□ -0.64
CXXC1-212ENST00000589940 C7orf33Q8WU49 177 aa11.07□□□□□ -0.64
CXXC1-212ENST00000589940 PANO1I0J062 215 aa11.07□□□□□ -0.64
CXXC1-212ENST00000589940 SPACA4Q8TDM5 124 aa11.07□□□□□ -0.64
CXXC1-212ENST00000589940 GAGE10A6NGK3 116 aa11.06□□□□□ -0.64
CXXC1-212ENST00000589940 SCGB1C2P0DMR2 95 aa11.06□□□□□ -0.64
CXXC1-212ENST00000589940 LYRM7Q5U5X0 104 aa11.06□□□□□ -0.64
CXXC1-212ENST00000589940 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.06□□□□□ -0.64
CXXC1-212ENST00000589940 COX6CP09669 75 aa11.05□□□□□ -0.64
CXXC1-212ENST00000589940 MRPL55Q7Z7F7 128 aaKnown RBP11.05□□□□□ -0.64
CXXC1-212ENST00000589940 SVIPQ8NHG7 77 aa11.05□□□□□ -0.64
CXXC1-212ENST00000589940 M0QXV9 152 aa11.04□□□□□ -0.64
CXXC1-212ENST00000589940 GTF2H5Q6ZYL4 71 aa11.04□□□□□ -0.64
CXXC1-212ENST00000589940 TRAV23DV6A0A075B6W5 121 aa11.04□□□□□ -0.64
CXXC1-212ENST00000589940 SPCS1Q9Y6A9 102 aa11.04□□□□□ -0.64
CXXC1-212ENST00000589940 DPH3Q96FX2 82 aa11.03□□□□□ -0.64
CXXC1-212ENST00000589940 LINC00167Q96N53 147 aa11.03□□□□□ -0.64
CXXC1-212ENST00000589940 DNAH8Q96JB1 4490 aa11.02□□□□□ -0.64
CXXC1-212ENST00000589940 RYR3Q15413 4870 aa11.02□□□□□ -0.65
CXXC1-212ENST00000589940 IGLV1-50A0A075B6I6 118 aa11.01□□□□□ -0.65
CXXC1-212ENST00000589940 K7EP34 96 aa11.01□□□□□ -0.65
CXXC1-212ENST00000589940 RPL37AP8A6NKH3 93 aa11□□□□□ -0.65
CXXC1-212ENST00000589940 C6orf99Q4VX62 202 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms