RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 LBHQ53QV2 105 aaPredicted RBP8.67□□□□□ -1.02
MBD1-220ENST00000589758 RNF213Q63HN8 5207 aa8.66□□□□□ -1.02
MBD1-220ENST00000589758 ERG28Q9UKR5 140 aa8.66□□□□□ -1.02
MBD1-220ENST00000589758 C22orf24Q9Y442 160 aa8.66□□□□□ -1.02
MBD1-220ENST00000589758 KRTAP1-4P0C5Y4 121 aa8.65□□□□□ -1.02
MBD1-220ENST00000589758 A0A0U1RRA0 63 aa8.64□□□□□ -1.03
MBD1-220ENST00000589758 ZNF861PO60384 105 aa8.64□□□□□ -1.03
MBD1-220ENST00000589758 RPL13AP40429 203 aaKnown RBP8.64□□□□□ -1.03
MBD1-220ENST00000589758 KRTDAPP60985 99 aa8.64□□□□□ -1.03
MBD1-220ENST00000589758 HERVK_113P61574 105 aa8.64□□□□□ -1.03
MBD1-220ENST00000589758 SFTA2Q6UW10 78 aa8.64□□□□□ -1.03
MBD1-220ENST00000589758 TP73-AS1Q9UF72 201 aa8.64□□□□□ -1.03
MBD1-220ENST00000589758 LEPROTO15243 131 aa8.63□□□□□ -1.03
MBD1-220ENST00000589758 C3orf79P0CE67 100 aa8.63□□□□□ -1.03
MBD1-220ENST00000589758 LINC00158P58513 81 aa8.62□□□□□ -1.03
MBD1-220ENST00000589758 TSPEAR-AS2P59090 65 aa8.62□□□□□ -1.03
MBD1-220ENST00000589758 MEIG1Q5JSS6 88 aa8.62□□□□□ -1.03
MBD1-220ENST00000589758 PET117Q6UWS5 81 aa8.62□□□□□ -1.03
MBD1-220ENST00000589758 PLEKHB2Q96CS7 222 aa8.62□□□□□ -1.03
MBD1-220ENST00000589758 NDUFA12Q9UI09 145 aa8.62□□□□□ -1.03
MBD1-220ENST00000589758 COX17Q14061 63 aa8.61□□□□□ -1.03
MBD1-220ENST00000589758 LINC01545Q5VT33 79 aa8.61□□□□□ -1.03
MBD1-220ENST00000589758 MRPL55Q7Z7F7 128 aaKnown RBP8.61□□□□□ -1.03
MBD1-220ENST00000589758 SND1-IT1Q9HBX3 110 aa8.61□□□□□ -1.03
MBD1-220ENST00000589758 MYMXA0A1B0GTQ4 84 aa8.6□□□□□ -1.03
MBD1-220ENST00000589758 J3QQQ9 107 aa8.6□□□□□ -1.03
MBD1-220ENST00000589758 SMIM13P0DJ93 91 aa8.6□□□□□ -1.03
MBD1-220ENST00000589758 LGALS3P17931 250 aaKnown RBP8.6□□□□□ -1.03
MBD1-220ENST00000589758 S100A6P06703 90 aa8.59□□□□□ -1.03
MBD1-220ENST00000589758 RPL28P46779 137 aaKnown RBP8.59□□□□□ -1.03
MBD1-220ENST00000589758 HERV-K104P63124 156 aa8.59□□□□□ -1.03
MBD1-220ENST00000589758 GAGE10A6NGK3 116 aa8.58□□□□□ -1.04
MBD1-220ENST00000589758 BCE1O60756 84 aa8.58□□□□□ -1.04
MBD1-220ENST00000589758 S100A2P29034 98 aa8.58□□□□□ -1.04
MBD1-220ENST00000589758 HIST3H2BBQ8N257 126 aa8.58□□□□□ -1.04
MBD1-220ENST00000589758 NKAPP1Q8N9T2 125 aa8.58□□□□□ -1.04
MBD1-220ENST00000589758 E9PLD3 99 aa8.57□□□□□ -1.04
MBD1-220ENST00000589758 C20orf202A1L168 122 aa8.56□□□□□ -1.04
MBD1-220ENST00000589758 RPL37AP8A6NKH3 93 aa8.56□□□□□ -1.04
MBD1-220ENST00000589758 LINC00167Q96N53 147 aa8.56□□□□□ -1.04
MBD1-220ENST00000589758 IGLV5-37A0A075B6J1 123 aa8.55□□□□□ -1.04
MBD1-220ENST00000589758 ATOH7Q8N100 152 aa8.55□□□□□ -1.04
MBD1-220ENST00000589758 MIR7-3HGQ8N6C7 128 aa8.55□□□□□ -1.04
MBD1-220ENST00000589758 LINC00587B1AMM8 73 aa8.54□□□□□ -1.04
MBD1-220ENST00000589758 VPREB1P12018 145 aa8.54□□□□□ -1.04
MBD1-220ENST00000589758 NMUP48645 174 aa8.54□□□□□ -1.04
MBD1-220ENST00000589758 SNRPEP62304 92 aaKnown RBP8.54□□□□□ -1.04
MBD1-220ENST00000589758 RPL24P83731 157 aaKnown RBP8.54□□□□□ -1.04
MBD1-220ENST00000589758 DAND5Q8N907 189 aa8.54□□□□□ -1.04
MBD1-220ENST00000589758 HIST1H2BLQ99880 126 aa8.54□□□□□ -1.04
MBD1-220ENST00000589758 Q8NDZ9 215 aa8.53□□□□□ -1.04
MBD1-220ENST00000589758 LPAP08519 4548 aa8.53□□□□□ -1.04
MBD1-220ENST00000589758 IGKV2D-26A0A0A0MRZ7 120 aa8.52□□□□□ -1.05
MBD1-220ENST00000589758 IGKV2-28A0A075B6P5 120 aa8.51□□□□□ -1.05
MBD1-220ENST00000589758 A0A0J9YXY3 114 aa8.51□□□□□ -1.05
MBD1-220ENST00000589758 IGKV2D-28P01615 120 aa8.51□□□□□ -1.05
MBD1-220ENST00000589758 CRYGAP11844 174 aa8.51□□□□□ -1.05
MBD1-220ENST00000589758 PRR4Q16378 134 aa8.51□□□□□ -1.05
MBD1-220ENST00000589758 BOD1L2Q8IYS8 172 aa8.51□□□□□ -1.05
MBD1-220ENST00000589758 UBE2AP49459 152 aa8.5□□□□□ -1.05
MBD1-220ENST00000589758 TTTY13Q9BZ97 58 aa8.5□□□□□ -1.05
MBD1-220ENST00000589758 ZNF815PA8K554 130 aa8.49□□□□□ -1.05
MBD1-220ENST00000589758 NCR3O14931 201 aa8.49□□□□□ -1.05
MBD1-220ENST00000589758 NPC2P61916 151 aa8.49□□□□□ -1.05
MBD1-220ENST00000589758 ANKRD39Q53RE8 183 aa8.49□□□□□ -1.05
MBD1-220ENST00000589758 TYMSOSQ8TAI1 123 aa8.49□□□□□ -1.05
MBD1-220ENST00000589758 A0A087X002 238 aa8.48□□□□□ -1.05
MBD1-220ENST00000589758 C5orf52A6NGY3 159 aa8.47□□□□□ -1.05
MBD1-220ENST00000589758 ADAMTSL4-AS1Q5T5F5 129 aa8.47□□□□□ -1.05
MBD1-220ENST00000589758 KRTAP13-1Q8IUC0 172 aa8.47□□□□□ -1.05
MBD1-220ENST00000589758 MIEN1Q9BRT3 115 aa8.47□□□□□ -1.05
MBD1-220ENST00000589758 M0R378 163 aa8.46□□□□□ -1.06
MBD1-220ENST00000589758 TSPAN13O95857 204 aa8.46□□□□□ -1.06
MBD1-220ENST00000589758 AKR1D1P51857 326 aa8.46□□□□□ -1.06
MBD1-220ENST00000589758 TMEM238C9JI98 176 aa8.45□□□□□ -1.06
MBD1-220ENST00000589758 FAM229BQ4G0N7 80 aa8.45□□□□□ -1.06
MBD1-220ENST00000589758 SCGB1D1O95968 90 aa8.44□□□□□ -1.06
MBD1-220ENST00000589758 EIF4EBP3O60516 100 aaPredicted RBP8.43□□□□□ -1.06
MBD1-220ENST00000589758 SOSTDC1Q6X4U4 206 aa8.43□□□□□ -1.06
MBD1-220ENST00000589758 FAM19A1Q7Z5A9 133 aa8.43□□□□□ -1.06
MBD1-220ENST00000589758 PCP2Q8IVA1 136 aa8.43□□□□□ -1.06
MBD1-220ENST00000589758 TMEM126AQ9H061 195 aa8.43□□□□□ -1.06
MBD1-220ENST00000589758 LOC107984156A0A0G2JMH3 177 aa8.42□□□□□ -1.06
MBD1-220ENST00000589758 HSBP1L1C9JCN9 74 aa8.42□□□□□ -1.06
MBD1-220ENST00000589758 SCGB1D4Q6XE38 83 aa8.42□□□□□ -1.06
MBD1-220ENST00000589758 ARL17AQ8IVW1 177 aa8.42□□□□□ -1.06
MBD1-220ENST00000589758 LITAFQ99732 161 aa8.42□□□□□ -1.06
MBD1-220ENST00000589758 ANAPC11Q9NYG5 84 aa8.42□□□□□ -1.06
MBD1-220ENST00000589758 TIMM17BO60830 172 aa8.41□□□□□ -1.06
MBD1-220ENST00000589758 PRLHP81277 87 aa8.41□□□□□ -1.06
MBD1-220ENST00000589758 KRTAP13-2Q52LG2 175 aa8.41□□□□□ -1.06
MBD1-220ENST00000589758 TRBV10-3A0A0K0K1G6 114 aa8.4□□□□□ -1.06
MBD1-220ENST00000589758 LINC00308Q8TCZ7 52 aa8.4□□□□□ -1.06
MBD1-220ENST00000589758 CTAG1AP78358 180 aa8.39□□□□□ -1.07
MBD1-220ENST00000589758 SPANXB1Q9NS25 103 aaPredicted RBP8.39□□□□□ -1.07
MBD1-220ENST00000589758 TMA7Q9Y2S6 64 aaKnown RBP8.39□□□□□ -1.07
MBD1-220ENST00000589758 PRYO14603 147 aa8.38□□□□□ -1.07
MBD1-220ENST00000589758 NDUFC2O95298 119 aa8.38□□□□□ -1.07
MBD1-220ENST00000589758 DDTP30046 118 aa8.38□□□□□ -1.07
MBD1-220ENST00000589758 S100A7L2Q5SY68 101 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms