RNA–Protein interactions for RNA: ENST00000589528.1

ACTN4-211, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-211ENST00000589528 SPINK1P00995 79 aa8.58□□□□□ -1.04
ACTN4-211ENST00000589528 ZNF625Q96I27 306 aaPredicted RBP8.58□□□□□ -1.04
ACTN4-211ENST00000589528 KRTAP4-1Q9BYQ7 146 aa8.58□□□□□ -1.04
ACTN4-211ENST00000589528 IGLV5-39A0A0G2JS06 123 aa8.55□□□□□ -1.04
ACTN4-211ENST00000589528 NDUFA6P56556 154 aa8.55□□□□□ -1.04
ACTN4-211ENST00000589528 FAM19A2Q8N3H0 131 aa8.55□□□□□ -1.04
ACTN4-211ENST00000589528 FA2HQ7L5A8 372 aa8.54□□□□□ -1.04
ACTN4-211ENST00000589528 Q8NDZ9 215 aa8.54□□□□□ -1.04
ACTN4-211ENST00000589528 SMCO4Q9NRQ5 59 aa8.54□□□□□ -1.04
ACTN4-211ENST00000589528 IGLC3P0DOY3 106 aa8.53□□□□□ -1.04
ACTN4-211ENST00000589528 LINC00158P58513 81 aa8.53□□□□□ -1.04
ACTN4-211ENST00000589528 SFTA2Q6UW10 78 aa8.53□□□□□ -1.04
ACTN4-211ENST00000589528 ZNF22P17026 224 aaPredicted RBP8.52□□□□□ -1.05
ACTN4-211ENST00000589528 LINC01546A6NGU7 62 aa8.51□□□□□ -1.05
ACTN4-211ENST00000589528 IGLV9-49A0A0B4J1Y8 123 aa8.5□□□□□ -1.05
ACTN4-211ENST00000589528 ETDCA0A1B0GVM5 59 aa8.5□□□□□ -1.05
ACTN4-211ENST00000589528 PRYO14603 147 aa8.5□□□□□ -1.05
ACTN4-211ENST00000589528 ATP6V1G1O75348 118 aa8.5□□□□□ -1.05
ACTN4-211ENST00000589528 SMCR5Q8TEV8 140 aa8.5□□□□□ -1.05
ACTN4-211ENST00000589528 A0A0U1RRA0 63 aa8.49□□□□□ -1.05
ACTN4-211ENST00000589528 MOBPQ13875 183 aa8.49□□□□□ -1.05
ACTN4-211ENST00000589528 SLC25A20O43772 301 aa8.48□□□□□ -1.05
ACTN4-211ENST00000589528 TMEM170BQ5T4T1 132 aa8.48□□□□□ -1.05
ACTN4-211ENST00000589528 GAGE2AQ6NT46 116 aa8.48□□□□□ -1.05
ACTN4-211ENST00000589528 RPS29P62273 56 aaKnown RBP8.47□□□□□ -1.05
ACTN4-211ENST00000589528 Q8N377 158 aa8.47□□□□□ -1.05
ACTN4-211ENST00000589528 TRAV9-1A0A075B6T8 112 aa8.46□□□□□ -1.06
ACTN4-211ENST00000589528 NCR3O14931 201 aa8.46□□□□□ -1.06
ACTN4-211ENST00000589528 S100A12P80511 92 aa8.46□□□□□ -1.06
ACTN4-211ENST00000589528 XP32Q5T750 250 aa8.46□□□□□ -1.06
ACTN4-211ENST00000589528 BOD1L2Q8IYS8 172 aa8.46□□□□□ -1.06
ACTN4-211ENST00000589528 LINC00483Q53H64 154 aa8.45□□□□□ -1.06
ACTN4-211ENST00000589528 SSBP3-AS1Q7Z2R9 100 aa8.45□□□□□ -1.06
ACTN4-211ENST00000589528 CFC1BP0CG36 223 aa8.44□□□□□ -1.06
ACTN4-211ENST00000589528 S100PP25815 95 aa8.44□□□□□ -1.06
ACTN4-211ENST00000589528 KCNQ1DNQ9H478 68 aa8.44□□□□□ -1.06
ACTN4-211ENST00000589528 C11orf86A6NJI1 115 aa8.43□□□□□ -1.06
ACTN4-211ENST00000589528 SPRR1AP35321 89 aa8.43□□□□□ -1.06
ACTN4-211ENST00000589528 FABP9Q0Z7S8 132 aa8.43□□□□□ -1.06
ACTN4-211ENST00000589528 MEIG1Q5JSS6 88 aa8.43□□□□□ -1.06
ACTN4-211ENST00000589528 BAGE3Q86Y29 109 aa8.42□□□□□ -1.06
ACTN4-211ENST00000589528 SMIM13P0DJ93 91 aa8.41□□□□□ -1.06
ACTN4-211ENST00000589528 COX19Q49B96 90 aa8.41□□□□□ -1.06
ACTN4-211ENST00000589528 CLLU1Q5K131 121 aa8.41□□□□□ -1.06
ACTN4-211ENST00000589528 LCE2CQ5TA81 110 aa8.41□□□□□ -1.06
ACTN4-211ENST00000589528 TRBV10-3A0A0K0K1G6 114 aa8.4□□□□□ -1.06
ACTN4-211ENST00000589528 HBDP02042 147 aa8.4□□□□□ -1.06
ACTN4-211ENST00000589528 IFITM2Q01629 132 aa8.4□□□□□ -1.06
ACTN4-211ENST00000589528 C9orf153Q5TBE3 101 aa8.4□□□□□ -1.06
ACTN4-211ENST00000589528 A0A096LNJ9 63 aa8.39□□□□□ -1.07
ACTN4-211ENST00000589528 KRTAP4-16G5E9R7 235 aaPredicted RBP8.39□□□□□ -1.07
ACTN4-211ENST00000589528 MT1HP80294 61 aa8.39□□□□□ -1.07
ACTN4-211ENST00000589528 MIR7-3HGQ8N6C7 128 aa8.39□□□□□ -1.07
ACTN4-211ENST00000589528 PMCHL1Q16048 86 aa8.38□□□□□ -1.07
ACTN4-211ENST00000589528 IGLV8-61A0A075B6I0 122 aa8.37□□□□□ -1.07
ACTN4-211ENST00000589528 B5MCH6 92 aa8.37□□□□□ -1.07
ACTN4-211ENST00000589528 ERC2-IT1O76042 136 aa8.37□□□□□ -1.07
ACTN4-211ENST00000589528 LINC00614P0C842 121 aa8.37□□□□□ -1.07
ACTN4-211ENST00000589528 CHTOPQ9Y3Y2 248 aaKnown RBP8.37□□□□□ -1.07
ACTN4-211ENST00000589528 LINC00587B1AMM8 73 aa8.36□□□□□ -1.07
ACTN4-211ENST00000589528 PCOTHQ58A44 107 aa8.36□□□□□ -1.07
ACTN4-211ENST00000589528 SEC11CQ9BY50 192 aa8.36□□□□□ -1.07
ACTN4-211ENST00000589528 HERV-K104P63124 156 aa8.35□□□□□ -1.07
ACTN4-211ENST00000589528 MAP1LC3CQ9BXW4 147 aa8.35□□□□□ -1.07
ACTN4-211ENST00000589528 TMEM223A0PJW6 202 aa8.34□□□□□ -1.07
ACTN4-211ENST00000589528 DDTP30046 118 aa8.34□□□□□ -1.07
ACTN4-211ENST00000589528 KRTAP19-2Q3LHN2 52 aa8.34□□□□□ -1.07
ACTN4-211ENST00000589528 M0R2T5 61 aa8.33□□□□□ -1.08
ACTN4-211ENST00000589528 Q6ZRX8 168 aa8.33□□□□□ -1.08
ACTN4-211ENST00000589528 Q9BRP9 147 aa8.33□□□□□ -1.08
ACTN4-211ENST00000589528 UQCC3Q6UW78 93 aa8.32□□□□□ -1.08
ACTN4-211ENST00000589528 C18orf32Q8TCD1 76 aa8.32□□□□□ -1.08
ACTN4-211ENST00000589528 URB1-AS1Q96HZ7 61 aa8.32□□□□□ -1.08
ACTN4-211ENST00000589528 C9orf92A6NGG3 77 aa8.31□□□□□ -1.08
ACTN4-211ENST00000589528 JOSD1Q15040 202 aaPredicted RBP8.31□□□□□ -1.08
ACTN4-211ENST00000589528 LIMD2Q9BT23 127 aa8.31□□□□□ -1.08
ACTN4-211ENST00000589528 MYMXA0A1B0GTQ4 84 aa8.3□□□□□ -1.08
ACTN4-211ENST00000589528 KRTAP10-6P60371 365 aaPredicted RBP8.3□□□□□ -1.08
ACTN4-211ENST00000589528 TRAPPC1Q9Y5R8 145 aa8.3□□□□□ -1.08
ACTN4-211ENST00000589528 TMEM218A2RU14 115 aa8.29□□□□□ -1.08
ACTN4-211ENST00000589528 LORP23490 312 aaPredicted RBP8.29□□□□□ -1.08
ACTN4-211ENST00000589528 S100A7L2Q5SY68 101 aa8.29□□□□□ -1.08
ACTN4-211ENST00000589528 TRBV10-2A0A0K0K1G8 114 aa8.28□□□□□ -1.08
ACTN4-211ENST00000589528 HRCT1Q6UXD1 115 aa8.28□□□□□ -1.08
ACTN4-211ENST00000589528 MIEN1Q9BRT3 115 aa8.28□□□□□ -1.08
ACTN4-211ENST00000589528 TRAV12-1A0A0B4J245 112 aa8.27□□□□□ -1.09
ACTN4-211ENST00000589528 SPANXB1Q9NS25 103 aaPredicted RBP8.27□□□□□ -1.09
ACTN4-211ENST00000589528 COX6B2Q6YFQ2 88 aa8.26□□□□□ -1.09
ACTN4-211ENST00000589528 IFI27L1Q96BM0 104 aa8.26□□□□□ -1.09
ACTN4-211ENST00000589528 TRAV23DV6A0A075B6W5 121 aa8.25□□□□□ -1.09
ACTN4-211ENST00000589528 COMMD7Q86VX2 200 aa8.25□□□□□ -1.09
ACTN4-211ENST00000589528 RPS10P5Q9NQ39 176 aa8.25□□□□□ -1.09
ACTN4-211ENST00000589528 ST20-AS1Q8NBB2 130 aa8.24□□□□□ -1.09
ACTN4-211ENST00000589528 LOC107984156A0A0G2JMH3 177 aa8.23□□□□□ -1.09
ACTN4-211ENST00000589528 IGLV6-57P01721 117 aa8.23□□□□□ -1.09
ACTN4-211ENST00000589528 HINT1P49773 126 aaPredicted RBP8.23□□□□□ -1.09
ACTN4-211ENST00000589528 SLC25A34Q6PIV7 304 aa8.23□□□□□ -1.09
ACTN4-211ENST00000589528 ARL17AQ8IVW1 177 aa8.23□□□□□ -1.09
ACTN4-211ENST00000589528 ZNF73O43830 326 aaPredicted RBP8.22□□□□□ -1.09
ACTN4-211ENST00000589528 RHEBQ15382 184 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms