RNA–Protein interactions for RNA: ENST00000589286.1

HMGN1P30-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 30, humanhuman

BASIC

Gene HMGN1P30, Length 268 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P30-201ENST00000589286 HSPB11Q9Y547 144 aa0.2□□□□□ -2.38
HMGN1P30-201ENST00000589286 TRAV36DV7A0A075B6V5 113 aa0.19□□□□□ -2.38
HMGN1P30-201ENST00000589286 IGHV1-24A0A0C4DH33 117 aa0.19□□□□□ -2.38
HMGN1P30-201ENST00000589286 TMEM30CPA0ZSE6 113 aa0.19□□□□□ -2.38
HMGN1P30-201ENST00000589286 C9orf92A6NGG3 77 aa0.19□□□□□ -2.38
HMGN1P30-201ENST00000589286 NDUFA2O43678 99 aa0.19□□□□□ -2.38
HMGN1P30-201ENST00000589286 TPST1O60507 370 aa0.19□□□□□ -2.38
HMGN1P30-201ENST00000589286 IGKCP01834 107 aa0.19□□□□□ -2.38
HMGN1P30-201ENST00000589286 TCRAP04437 139 aa0.19□□□□□ -2.38
HMGN1P30-201ENST00000589286 SCTP09683 121 aa0.19□□□□□ -2.38
HMGN1P30-201ENST00000589286 HTN1P15515 57 aa0.19□□□□□ -2.38
HMGN1P30-201ENST00000589286 SDC4P31431 198 aa0.19□□□□□ -2.38
HMGN1P30-201ENST00000589286 CKS2P33552 79 aa0.19□□□□□ -2.38
HMGN1P30-201ENST00000589286 TPPP2P59282 170 aa0.19□□□□□ -2.38
HMGN1P30-201ENST00000589286 DEFB1P60022 68 aa0.19□□□□□ -2.38
HMGN1P30-201ENST00000589286 RPL37P61927 97 aaKnown RBP0.19□□□□□ -2.38
HMGN1P30-201ENST00000589286 SPINK13Q1W4C9 94 aa0.19□□□□□ -2.38
HMGN1P30-201ENST00000589286 OR2T2Q6IF00 324 aa0.19□□□□□ -2.38
HMGN1P30-201ENST00000589286 IDO2Q6ZQW0 420 aa0.19□□□□□ -2.38
HMGN1P30-201ENST00000589286 AIF1LQ9BQI0 150 aa0.19□□□□□ -2.38
HMGN1P30-201ENST00000589286 METTL1Q9UBP6 276 aaKnown RBP0.19□□□□□ -2.38
HMGN1P30-201ENST00000589286 PNMA8CA0A1B0GUJ8 204 aa0.18□□□□□ -2.38
HMGN1P30-201ENST00000589286 FAM236AA0A1B0GUQ0 79 aa0.18□□□□□ -2.38
HMGN1P30-201ENST00000589286 FAM236BA0A1B0GV22 79 aa0.18□□□□□ -2.38
HMGN1P30-201ENST00000589286 LINC00587B1AMM8 73 aa0.18□□□□□ -2.38
HMGN1P30-201ENST00000589286 DPM2O94777 84 aa0.18□□□□□ -2.38
HMGN1P30-201ENST00000589286 MT-ND4LP03901 98 aa0.18□□□□□ -2.38
HMGN1P30-201ENST00000589286 LINC00694P0DN24 101 aa0.18□□□□□ -2.38
HMGN1P30-201ENST00000589286 UBE2D1P51668 147 aa0.18□□□□□ -2.38
HMGN1P30-201ENST00000589286 CCL18P55774 89 aa0.18□□□□□ -2.38
HMGN1P30-201ENST00000589286 EDDM3BP56851 147 aa0.18□□□□□ -2.38
HMGN1P30-201ENST00000589286 DR1Q01658 176 aa0.18□□□□□ -2.38
HMGN1P30-201ENST00000589286 ZNF56Q15929 161 aa0.18□□□□□ -2.38
HMGN1P30-201ENST00000589286 DEFB114Q30KQ6 69 aa0.18□□□□□ -2.38
HMGN1P30-201ENST00000589286 HSD17B12Q53GQ0 312 aa0.18□□□□□ -2.38
HMGN1P30-201ENST00000589286 SCIMPQ6UWF3 145 aa0.18□□□□□ -2.38
HMGN1P30-201ENST00000589286 TMEM91Q6ZNR0 172 aa0.18□□□□□ -2.38
HMGN1P30-201ENST00000589286 WFDC10BQ8IUB3 73 aa0.18□□□□□ -2.38
HMGN1P30-201ENST00000589286 KRTAP8-1Q8IUC2 63 aa0.18□□□□□ -2.38
HMGN1P30-201ENST00000589286 OR8I2Q8N0Y5 310 aa0.18□□□□□ -2.38
HMGN1P30-201ENST00000589286 SNRNP25Q9BV90 132 aaKnown RBP0.18□□□□□ -2.38
HMGN1P30-201ENST00000589286 TTTY10Q9BZA0 68 aa0.18□□□□□ -2.38
HMGN1P30-201ENST00000589286 ATG5Q9H1Y0 275 aa0.18□□□□□ -2.38
HMGN1P30-201ENST00000589286 RERGLQ9H628 205 aa0.18□□□□□ -2.38
HMGN1P30-201ENST00000589286 A6NIN4 97 aa0.17□□□□□ -2.38
HMGN1P30-201ENST00000589286 DEGS1O15121 323 aa0.17□□□□□ -2.38
HMGN1P30-201ENST00000589286 PAEPP09466 180 aa0.17□□□□□ -2.38
HMGN1P30-201ENST00000589286 SPART-AS1P0CW21 52 aa0.17□□□□□ -2.38
HMGN1P30-201ENST00000589286 IL7P13232 177 aa0.17□□□□□ -2.38
HMGN1P30-201ENST00000589286 ADCYAP1P18509 176 aa0.17□□□□□ -2.38
HMGN1P30-201ENST00000589286 DEFB131AP59861 70 aa0.17□□□□□ -2.38
HMGN1P30-201ENST00000589286 PCBD1P61457 104 aa0.17□□□□□ -2.38
HMGN1P30-201ENST00000589286 HIST1H1AQ02539 215 aaPredicted RBP0.17□□□□□ -2.38
HMGN1P30-201ENST00000589286 PLGLAQ15195 96 aa0.17□□□□□ -2.38
HMGN1P30-201ENST00000589286 LINC01556Q5JQF7 62 aa0.17□□□□□ -2.38
HMGN1P30-201ENST00000589286 TMEM244Q5VVB8 128 aa0.17□□□□□ -2.38
HMGN1P30-201ENST00000589286 NCBP2-AS2Q69YL0 99 aa0.17□□□□□ -2.38
HMGN1P30-201ENST00000589286 CLPSL2Q6UWE3 100 aa0.17□□□□□ -2.38
HMGN1P30-201ENST00000589286 UNQ5815/PRO19632Q6UWF5 114 aa0.17□□□□□ -2.38
HMGN1P30-201ENST00000589286 GAFA1Q96PS6 74 aa0.17□□□□□ -2.38
HMGN1P30-201ENST00000589286 SDF2Q99470 211 aa0.17□□□□□ -2.38
HMGN1P30-201ENST00000589286 SPANXA1Q9NS26 97 aa0.17□□□□□ -2.38
HMGN1P30-201ENST00000589286 SPANXCQ9NY87 97 aa0.17□□□□□ -2.38
HMGN1P30-201ENST00000589286 COA4Q9NYJ1 87 aa0.17□□□□□ -2.38
HMGN1P30-201ENST00000589286 RABAC1Q9UI14 185 aa0.17□□□□□ -2.38
HMGN1P30-201ENST00000589286 UBE2D4Q9Y2X8 147 aa0.17□□□□□ -2.38
HMGN1P30-201ENST00000589286 DNAJC15Q9Y5T4 150 aa0.17□□□□□ -2.38
HMGN1P30-201ENST00000589286 TRAV12-2A0A075B6T6 113 aa0.16□□□□□ -2.38
HMGN1P30-201ENST00000589286 BORCS7-ASMTA0A0B4J1R7 106 aa0.16□□□□□ -2.38
HMGN1P30-201ENST00000589286 C9JAW5 83 aa0.16□□□□□ -2.38
HMGN1P30-201ENST00000589286 CCDC179H3BU77 68 aa0.16□□□□□ -2.38
HMGN1P30-201ENST00000589286 M0R1W7 72 aa0.16□□□□□ -2.38
HMGN1P30-201ENST00000589286 CD3DP04234 171 aa0.16□□□□□ -2.38
HMGN1P30-201ENST00000589286 CCKP06307 115 aa0.16□□□□□ -2.38
HMGN1P30-201ENST00000589286 IGLC6P0CF74 106 aa0.16□□□□□ -2.38
HMGN1P30-201ENST00000589286 HIST1H1BP16401 226 aaKnown RBP0.16□□□□□ -2.38
HMGN1P30-201ENST00000589286 CBLN1P23435 193 aa0.16□□□□□ -2.38
HMGN1P30-201ENST00000589286 RPS27P42677 84 aaKnown RBP0.16□□□□□ -2.38
HMGN1P30-201ENST00000589286 CKS1BP61024 79 aa0.16□□□□□ -2.38
HMGN1P30-201ENST00000589286 SARNPP82979 210 aaKnown RBP0.16□□□□□ -2.38
HMGN1P30-201ENST00000589286 KLKP1Q107X0 134 aa0.16□□□□□ -2.38
HMGN1P30-201ENST00000589286 KRTAP20-2Q3LI61 65 aa0.16□□□□□ -2.38
HMGN1P30-201ENST00000589286 TCTE3Q8IZS6 198 aa0.16□□□□□ -2.38
HMGN1P30-201ENST00000589286 TTC9CQ8N5M4 171 aa0.16□□□□□ -2.38
HMGN1P30-201ENST00000589286 LSM10Q969L4 123 aaKnown RBP0.16□□□□□ -2.38
HMGN1P30-201ENST00000589286 FAM107BQ9H098 131 aa0.16□□□□□ -2.38
HMGN1P30-201ENST00000589286 SLC35B3Q9H1N7 401 aa0.16□□□□□ -2.38
HMGN1P30-201ENST00000589286 NOP10Q9NPE3 64 aaKnown RBP0.16□□□□□ -2.38
HMGN1P30-201ENST00000589286 TMEM14BQ9NUH8 114 aa0.16□□□□□ -2.38
HMGN1P30-201ENST00000589286 GSKIPQ9P0R6 139 aa0.16□□□□□ -2.38
HMGN1P30-201ENST00000589286 HIGD1AQ9Y241 93 aa0.16□□□□□ -2.38
HMGN1P30-201ENST00000589286 A0A096LNI7 61 aa0.15□□□□□ -2.39
HMGN1P30-201ENST00000589286 TRAV2A0A0B4J234 112 aa0.15□□□□□ -2.39
HMGN1P30-201ENST00000589286 TRBV10-1A0A0K0K1A3 114 aa0.15□□□□□ -2.39
HMGN1P30-201ENST00000589286 LOC285095A0A1B0GVY8 99 aa0.15□□□□□ -2.39
HMGN1P30-201ENST00000589286 M0R2Z0 102 aa0.15□□□□□ -2.39
HMGN1P30-201ENST00000589286 GNG7O60262 68 aa0.15□□□□□ -2.39
HMGN1P30-201ENST00000589286 SPINK4O60575 86 aa0.15□□□□□ -2.39
HMGN1P30-201ENST00000589286 OR2H2O95918 312 aa0.15□□□□□ -2.39
HMGN1P30-201ENST00000589286 SFTA3P0C7M3 94 aa0.15□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms