RNA–Protein interactions for RNA: ENST00000589091.1

DNMT1-217, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-217ENST00000589091 VPREB1P12018 145 aa8.64□□□□□ -1.03
DNMT1-217ENST00000589091 FAM229BQ4G0N7 80 aa8.63□□□□□ -1.03
DNMT1-217ENST00000589091 CHTOPQ9Y3Y2 248 aaKnown RBP8.63□□□□□ -1.03
DNMT1-217ENST00000589091 LPAP08519 4548 aa8.63□□□□□ -1.03
DNMT1-217ENST00000589091 ZNF625Q96I27 306 aaPredicted RBP8.62□□□□□ -1.03
DNMT1-217ENST00000589091 SCO1O75880 301 aa8.61□□□□□ -1.03
DNMT1-217ENST00000589091 TSPAN13O95857 204 aa8.61□□□□□ -1.03
DNMT1-217ENST00000589091 FAM19A1Q7Z5A9 133 aa8.61□□□□□ -1.03
DNMT1-217ENST00000589091 CHCHD1Q96BP2 118 aaKnown RBP8.61□□□□□ -1.03
DNMT1-217ENST00000589091 TMEM126AQ9H061 195 aa8.61□□□□□ -1.03
DNMT1-217ENST00000589091 RNF213Q63HN8 5207 aa8.61□□□□□ -1.03
DNMT1-217ENST00000589091 TRAV12-1A0A0B4J245 112 aa8.6□□□□□ -1.03
DNMT1-217ENST00000589091 EIF4EBP3O60516 100 aaPredicted RBP8.6□□□□□ -1.03
DNMT1-217ENST00000589091 PRLHP81277 87 aa8.59□□□□□ -1.03
DNMT1-217ENST00000589091 TMEM223A0PJW6 202 aa8.58□□□□□ -1.04
DNMT1-217ENST00000589091 LINC00158P58513 81 aa8.58□□□□□ -1.04
DNMT1-217ENST00000589091 KRTAP13-2Q52LG2 175 aa8.58□□□□□ -1.04
DNMT1-217ENST00000589091 IFI27L1Q96BM0 104 aa8.58□□□□□ -1.04
DNMT1-217ENST00000589091 IGKV2D-26A0A0A0MRZ7 120 aa8.57□□□□□ -1.04
DNMT1-217ENST00000589091 TMEM238C9JI98 176 aa8.57□□□□□ -1.04
DNMT1-217ENST00000589091 M0R378 163 aa8.57□□□□□ -1.04
DNMT1-217ENST00000589091 CTAG1AP78358 180 aa8.57□□□□□ -1.04
DNMT1-217ENST00000589091 ANAPC11Q9NYG5 84 aa8.57□□□□□ -1.04
DNMT1-217ENST00000589091 GHRHP01286 108 aa8.56□□□□□ -1.04
DNMT1-217ENST00000589091 LINC00304Q8N9R0 145 aa8.56□□□□□ -1.04
DNMT1-217ENST00000589091 ATP6V1G1O75348 118 aa8.55□□□□□ -1.04
DNMT1-217ENST00000589091 YPEL4Q96NS1 127 aa8.55□□□□□ -1.04
DNMT1-217ENST00000589091 LINC00587B1AMM8 73 aa8.54□□□□□ -1.04
DNMT1-217ENST00000589091 HSBP1O75506 76 aa8.54□□□□□ -1.04
DNMT1-217ENST00000589091 HERV-K104P63124 156 aa8.54□□□□□ -1.04
DNMT1-217ENST00000589091 CBLN2Q8IUK8 224 aa8.54□□□□□ -1.04
DNMT1-217ENST00000589091 Q8NDZ9 215 aa8.54□□□□□ -1.04
DNMT1-217ENST00000589091 MEIG1Q5JSS6 88 aa8.53□□□□□ -1.04
DNMT1-217ENST00000589091 PLEKHB2Q96CS7 222 aa8.53□□□□□ -1.04
DNMT1-217ENST00000589091 A0A0U1RRA0 63 aa8.52□□□□□ -1.05
DNMT1-217ENST00000589091 SVIPQ8NHG7 77 aa8.52□□□□□ -1.05
DNMT1-217ENST00000589091 HIGD2AQ9BW72 106 aa8.52□□□□□ -1.05
DNMT1-217ENST00000589091 PRYO14603 147 aa8.51□□□□□ -1.05
DNMT1-217ENST00000589091 SMIM13P0DJ93 91 aa8.51□□□□□ -1.05
DNMT1-217ENST00000589091 BOD1L2Q8IYS8 172 aa8.5□□□□□ -1.05
DNMT1-217ENST00000589091 MIR7-3HGQ8N6C7 128 aa8.5□□□□□ -1.05
DNMT1-217ENST00000589091 MAP1LC3CQ9BXW4 147 aa8.5□□□□□ -1.05
DNMT1-217ENST00000589091 ZNF706Q9Y5V0 76 aaPredicted RBP8.5□□□□□ -1.05
DNMT1-217ENST00000589091 A0A0U1RQV1 116 aa8.49□□□□□ -1.05
DNMT1-217ENST00000589091 MYMXA0A1B0GTQ4 84 aa8.49□□□□□ -1.05
DNMT1-217ENST00000589091 FAM19A2Q8N3H0 131 aa8.49□□□□□ -1.05
DNMT1-217ENST00000589091 NDUFA12Q9UI09 145 aa8.49□□□□□ -1.05
DNMT1-217ENST00000589091 S100A12P80511 92 aa8.48□□□□□ -1.05
DNMT1-217ENST00000589091 LINC00337Q8N6G1 96 aa8.48□□□□□ -1.05
DNMT1-217ENST00000589091 SPRR4Q96PI1 79 aa8.48□□□□□ -1.05
DNMT1-217ENST00000589091 LEPROTL1O95214 131 aa8.47□□□□□ -1.05
DNMT1-217ENST00000589091 SPAG11AQ6PDA7 123 aa8.47□□□□□ -1.05
DNMT1-217ENST00000589091 RETNLBQ9BQ08 111 aa8.47□□□□□ -1.05
DNMT1-217ENST00000589091 KCNQ1DNQ9H478 68 aa8.47□□□□□ -1.05
DNMT1-217ENST00000589091 H0Y8G0 127 aa8.46□□□□□ -1.06
DNMT1-217ENST00000589091 NCR3O14931 201 aa8.46□□□□□ -1.06
DNMT1-217ENST00000589091 SPRR1AP35321 89 aa8.46□□□□□ -1.06
DNMT1-217ENST00000589091 C3orf22Q8N5N4 141 aa8.46□□□□□ -1.06
DNMT1-217ENST00000589091 ETDCA0A1B0GVM5 59 aa8.45□□□□□ -1.06
DNMT1-217ENST00000589091 LEPROTO15243 131 aa8.45□□□□□ -1.06
DNMT1-217ENST00000589091 TRGC2P03986 189 aa8.45□□□□□ -1.06
DNMT1-217ENST00000589091 PLNP26678 52 aa8.45□□□□□ -1.06
DNMT1-217ENST00000589091 TPRXLQ17RH7 258 aa8.45□□□□□ -1.06
DNMT1-217ENST00000589091 HERVK_113P61574 105 aa8.44□□□□□ -1.06
DNMT1-217ENST00000589091 HSPB8Q9UJY1 196 aa8.44□□□□□ -1.06
DNMT1-217ENST00000589091 IGLV7-46A0A075B6I9 117 aa8.43□□□□□ -1.06
DNMT1-217ENST00000589091 LOC107984156A0A0G2JMH3 177 aa8.43□□□□□ -1.06
DNMT1-217ENST00000589091 TRBV10-3A0A0K0K1G6 114 aa8.43□□□□□ -1.06
DNMT1-217ENST00000589091 SERF1AO75920 110 aa8.43□□□□□ -1.06
DNMT1-217ENST00000589091 ARL17AQ8IVW1 177 aa8.43□□□□□ -1.06
DNMT1-217ENST00000589091 KRTAP4-16G5E9R7 235 aaPredicted RBP8.42□□□□□ -1.06
DNMT1-217ENST00000589091 NMUP48645 174 aa8.42□□□□□ -1.06
DNMT1-217ENST00000589091 CDIP1Q9H305 208 aa8.42□□□□□ -1.06
DNMT1-217ENST00000589091 TRBV10-2A0A0K0K1G8 114 aa8.41□□□□□ -1.06
DNMT1-217ENST00000589091 J3QQQ9 107 aa8.41□□□□□ -1.06
DNMT1-217ENST00000589091 DPM2O94777 84 aa8.41□□□□□ -1.06
DNMT1-217ENST00000589091 LINC00310P59036 64 aa8.41□□□□□ -1.06
DNMT1-217ENST00000589091 TSPEAR-AS2P59090 65 aa8.41□□□□□ -1.06
DNMT1-217ENST00000589091 SMCR5Q8TEV8 140 aa8.41□□□□□ -1.06
DNMT1-217ENST00000589091 MIEN1Q9BRT3 115 aa8.41□□□□□ -1.06
DNMT1-217ENST00000589091 IGKCP01834 107 aa8.39□□□□□ -1.07
DNMT1-217ENST00000589091 LGALS3P17931 250 aaKnown RBP8.39□□□□□ -1.07
DNMT1-217ENST00000589091 DDTP30046 118 aa8.39□□□□□ -1.07
DNMT1-217ENST00000589091 FP248Q71RG6 208 aaPredicted RBP8.39□□□□□ -1.07
DNMT1-217ENST00000589091 SPANXB1Q9NS25 103 aaPredicted RBP8.39□□□□□ -1.07
DNMT1-217ENST00000589091 FABP4P15090 132 aa8.38□□□□□ -1.07
DNMT1-217ENST00000589091 DAND5Q8N907 189 aa8.38□□□□□ -1.07
DNMT1-217ENST00000589091 B5MCH6 92 aa8.37□□□□□ -1.07
DNMT1-217ENST00000589091 NDUFC2O95298 119 aa8.37□□□□□ -1.07
DNMT1-217ENST00000589091 LINC00483Q53H64 154 aa8.37□□□□□ -1.07
DNMT1-217ENST00000589091 Q8NBF4 154 aa8.37□□□□□ -1.07
DNMT1-217ENST00000589091 PPDPFQ9H3Y8 114 aa8.37□□□□□ -1.07
DNMT1-217ENST00000589091 SPINK1P00995 79 aa8.36□□□□□ -1.07
DNMT1-217ENST00000589091 ANKRD39Q53RE8 183 aa8.35□□□□□ -1.07
DNMT1-217ENST00000589091 S100A7L2Q5SY68 101 aa8.35□□□□□ -1.07
DNMT1-217ENST00000589091 Q6ZRX8 168 aa8.35□□□□□ -1.07
DNMT1-217ENST00000589091 PMCHL2Q9BQD1 86 aa8.35□□□□□ -1.07
DNMT1-217ENST00000589091 JOSD1Q15040 202 aaPredicted RBP8.34□□□□□ -1.07
DNMT1-217ENST00000589091 GAGE2AQ6NT46 116 aa8.34□□□□□ -1.07
DNMT1-217ENST00000589091 COLCA2A8K830 154 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms