RNA–Protein interactions for RNA: ENST00000589017.5

PRKAR1A-216, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, humanhuman

TSL 3

Gene PRKAR1A, Length 1,116 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1A-216ENST00000589017 SND1-IT1Q9HBX3 110 aa11.17□□□□□ -0.62
PRKAR1A-216ENST00000589017 RPL28P46779 137 aaKnown RBP11.16□□□□□ -0.62
PRKAR1A-216ENST00000589017 TMEM223A0PJW6 202 aa11.15□□□□□ -0.62
PRKAR1A-216ENST00000589017 LINC00310P59036 64 aa11.15□□□□□ -0.62
PRKAR1A-216ENST00000589017 FAM19A2Q8N3H0 131 aa11.15□□□□□ -0.62
PRKAR1A-216ENST00000589017 RPL13AP40429 203 aaKnown RBP11.14□□□□□ -0.63
PRKAR1A-216ENST00000589017 VPREB1P12018 145 aa11.13□□□□□ -0.63
PRKAR1A-216ENST00000589017 RPL24P83731 157 aaKnown RBP11.12□□□□□ -0.63
PRKAR1A-216ENST00000589017 COA6Q5JTJ3 125 aaKnown RBP11.12□□□□□ -0.63
PRKAR1A-216ENST00000589017 LRP2P98164 4655 aa11.11□□□□□ -0.63
PRKAR1A-216ENST00000589017 IGKV2-28A0A075B6P5 120 aa11.11□□□□□ -0.63
PRKAR1A-216ENST00000589017 LEPROTL1O95214 131 aa11.11□□□□□ -0.63
PRKAR1A-216ENST00000589017 IGKV2D-28P01615 120 aa11.11□□□□□ -0.63
PRKAR1A-216ENST00000589017 KRTAP13-1Q8IUC0 172 aa11.11□□□□□ -0.63
PRKAR1A-216ENST00000589017 S100A6P06703 90 aa11.09□□□□□ -0.63
PRKAR1A-216ENST00000589017 Q8NDZ9 215 aa11.09□□□□□ -0.63
PRKAR1A-216ENST00000589017 HSPB8Q9UJY1 196 aa11.09□□□□□ -0.63
PRKAR1A-216ENST00000589017 UBE2AP49459 152 aa11.08□□□□□ -0.64
PRKAR1A-216ENST00000589017 LINC00158P58513 81 aa11.08□□□□□ -0.64
PRKAR1A-216ENST00000589017 FABP4P15090 132 aa11.07□□□□□ -0.64
PRKAR1A-216ENST00000589017 H0Y8G0 127 aa11.06□□□□□ -0.64
PRKAR1A-216ENST00000589017 TMEM126AQ9H061 195 aa11.06□□□□□ -0.64
PRKAR1A-216ENST00000589017 A0A0U1RRA0 63 aa11.05□□□□□ -0.64
PRKAR1A-216ENST00000589017 A0A087X002 238 aa11.04□□□□□ -0.64
PRKAR1A-216ENST00000589017 TMEM238C9JI98 176 aa11.04□□□□□ -0.64
PRKAR1A-216ENST00000589017 SMIM13P0DJ93 91 aa11.04□□□□□ -0.64
PRKAR1A-216ENST00000589017 HERV-K104P63124 156 aa11.04□□□□□ -0.64
PRKAR1A-216ENST00000589017 M0R378 163 aa11.03□□□□□ -0.64
PRKAR1A-216ENST00000589017 MEIG1Q5JSS6 88 aa11.03□□□□□ -0.64
PRKAR1A-216ENST00000589017 MAP1LC3CQ9BXW4 147 aa11.03□□□□□ -0.64
PRKAR1A-216ENST00000589017 CRYGAP11844 174 aa11.02□□□□□ -0.65
PRKAR1A-216ENST00000589017 PLNP26678 52 aa11.02□□□□□ -0.65
PRKAR1A-216ENST00000589017 S100A2P29034 98 aa11.02□□□□□ -0.65
PRKAR1A-216ENST00000589017 PRLHP81277 87 aa11.02□□□□□ -0.65
PRKAR1A-216ENST00000589017 FAM19A1Q7Z5A9 133 aa11.02□□□□□ -0.65
PRKAR1A-216ENST00000589017 NDUFA12Q9UI09 145 aa11.02□□□□□ -0.65
PRKAR1A-216ENST00000589017 MYMXA0A1B0GTQ4 84 aa11□□□□□ -0.65
PRKAR1A-216ENST00000589017 LINC00587B1AMM8 73 aa11□□□□□ -0.65
PRKAR1A-216ENST00000589017 MIR7-3HGQ8N6C7 128 aa11□□□□□ -0.65
PRKAR1A-216ENST00000589017 LEPROTO15243 131 aa10.99□□□□□ -0.65
PRKAR1A-216ENST00000589017 TSPEAR-AS2P59090 65 aa10.99□□□□□ -0.65
PRKAR1A-216ENST00000589017 SNRPEP62304 92 aaKnown RBP10.99□□□□□ -0.65
PRKAR1A-216ENST00000589017 HIST3H2BBQ8N257 126 aa10.99□□□□□ -0.65
PRKAR1A-216ENST00000589017 DPM2O94777 84 aa10.98□□□□□ -0.65
PRKAR1A-216ENST00000589017 FAM229BQ4G0N7 80 aa10.98□□□□□ -0.65
PRKAR1A-216ENST00000589017 BOD1L2Q8IYS8 172 aa10.98□□□□□ -0.65
PRKAR1A-216ENST00000589017 TYMSOSQ8TAI1 123 aa10.98□□□□□ -0.65
PRKAR1A-216ENST00000589017 PLEKHB2Q96CS7 222 aa10.98□□□□□ -0.65
PRKAR1A-216ENST00000589017 ANAPC11Q9NYG5 84 aa10.98□□□□□ -0.65
PRKAR1A-216ENST00000589017 PMCHL2Q9BQD1 86 aa10.97□□□□□ -0.65
PRKAR1A-216ENST00000589017 C5orf52A6NGY3 159 aa10.96□□□□□ -0.65
PRKAR1A-216ENST00000589017 SYS1-DBNDD2H3BUS1 97 aa10.96□□□□□ -0.65
PRKAR1A-216ENST00000589017 IGKCP01834 107 aa10.96□□□□□ -0.65
PRKAR1A-216ENST00000589017 HERVK_113P61574 105 aa10.96□□□□□ -0.65
PRKAR1A-216ENST00000589017 KRTAP13-2Q52LG2 175 aa10.96□□□□□ -0.65
PRKAR1A-216ENST00000589017 LPAP08519 4548 aa10.96□□□□□ -0.66
PRKAR1A-216ENST00000589017 J3QQQ9 107 aa10.95□□□□□ -0.66
PRKAR1A-216ENST00000589017 RNF213Q63HN8 5207 aa10.95□□□□□ -0.66
PRKAR1A-216ENST00000589017 IGKV2D-26A0A0A0MRZ7 120 aa10.94□□□□□ -0.66
PRKAR1A-216ENST00000589017 NCR3O14931 201 aa10.94□□□□□ -0.66
PRKAR1A-216ENST00000589017 KRTDAPP60985 99 aa10.94□□□□□ -0.66
PRKAR1A-216ENST00000589017 PET117Q6UWS5 81 aa10.94□□□□□ -0.66
PRKAR1A-216ENST00000589017 HIST1H2BLQ99880 126 aa10.94□□□□□ -0.66
PRKAR1A-216ENST00000589017 TMA7Q9Y2S6 64 aaKnown RBP10.94□□□□□ -0.66
PRKAR1A-216ENST00000589017 PRYO14603 147 aa10.93□□□□□ -0.66
PRKAR1A-216ENST00000589017 C3orf79P0CE67 100 aa10.93□□□□□ -0.66
PRKAR1A-216ENST00000589017 NMUP48645 174 aa10.93□□□□□ -0.66
PRKAR1A-216ENST00000589017 TSPAN13O95857 204 aa10.92□□□□□ -0.66
PRKAR1A-216ENST00000589017 LOC107984156A0A0G2JMH3 177 aa10.91□□□□□ -0.66
PRKAR1A-216ENST00000589017 LGALS3P17931 250 aaKnown RBP10.91□□□□□ -0.66
PRKAR1A-216ENST00000589017 PRR4Q16378 134 aa10.91□□□□□ -0.66
PRKAR1A-216ENST00000589017 ARL17AQ8IVW1 177 aa10.91□□□□□ -0.66
PRKAR1A-216ENST00000589017 HIGD2AQ9BW72 106 aa10.91□□□□□ -0.66
PRKAR1A-216ENST00000589017 KCNQ1DNQ9H478 68 aa10.91□□□□□ -0.66
PRKAR1A-216ENST00000589017 C20orf202A1L168 122 aa10.9□□□□□ -0.66
PRKAR1A-216ENST00000589017 SPRR1AP35321 89 aa10.9□□□□□ -0.66
PRKAR1A-216ENST00000589017 LINC01545Q5VT33 79 aa10.9□□□□□ -0.66
PRKAR1A-216ENST00000589017 DAND5Q8N907 189 aa10.9□□□□□ -0.66
PRKAR1A-216ENST00000589017 LINC00337Q8N6G1 96 aa10.89□□□□□ -0.67
PRKAR1A-216ENST00000589017 TRBV10-3A0A0K0K1G6 114 aa10.88□□□□□ -0.67
PRKAR1A-216ENST00000589017 E9PLD3 99 aa10.87□□□□□ -0.67
PRKAR1A-216ENST00000589017 TRBV10-2A0A0K0K1G8 114 aa10.86□□□□□ -0.67
PRKAR1A-216ENST00000589017 KRTAP4-16G5E9R7 235 aaPredicted RBP10.86□□□□□ -0.67
PRKAR1A-216ENST00000589017 AKR1D1P51857 326 aa10.86□□□□□ -0.67
PRKAR1A-216ENST00000589017 LINC00304Q8N9R0 145 aa10.86□□□□□ -0.67
PRKAR1A-216ENST00000589017 SPRR4Q96PI1 79 aa10.86□□□□□ -0.67
PRKAR1A-216ENST00000589017 MIEN1Q9BRT3 115 aa10.85□□□□□ -0.67
PRKAR1A-216ENST00000589017 ETDCA0A1B0GVM5 59 aa10.84□□□□□ -0.67
PRKAR1A-216ENST00000589017 S100A12P80511 92 aa10.84□□□□□ -0.67
PRKAR1A-216ENST00000589017 SPANXB1Q9NS25 103 aaPredicted RBP10.84□□□□□ -0.67
PRKAR1A-216ENST00000589017 ZNF706Q9Y5V0 76 aaPredicted RBP10.84□□□□□ -0.67
PRKAR1A-216ENST00000589017 A0A0J9YXY3 114 aa10.83□□□□□ -0.68
PRKAR1A-216ENST00000589017 C3orf22Q8N5N4 141 aa10.83□□□□□ -0.68
PRKAR1A-216ENST00000589017 NDUFC2O95298 119 aa10.82□□□□□ -0.68
PRKAR1A-216ENST00000589017 DDTP30046 118 aa10.82□□□□□ -0.68
PRKAR1A-216ENST00000589017 CTAG1AP78358 180 aa10.8□□□□□ -0.68
PRKAR1A-216ENST00000589017 SOSTDC1Q6X4U4 206 aa10.8□□□□□ -0.68
PRKAR1A-216ENST00000589017 SMCR5Q8TEV8 140 aa10.8□□□□□ -0.68
PRKAR1A-216ENST00000589017 B5MCH6 92 aa10.79□□□□□ -0.68
PRKAR1A-216ENST00000589017 SCGB1D1O95968 90 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms