RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 C2orf48Q96LS8 159 aa13.01□□□□□ -0.33
ATG4D-208ENST00000588667 UNQ6190/PRO20217Q6UXQ8 127 aa13□□□□□ -0.33
ATG4D-208ENST00000588667 NHP2Q9NX24 153 aaKnown RBP13□□□□□ -0.33
ATG4D-208ENST00000588667 Q6ZSA8 131 aa12.99□□□□□ -0.33
ATG4D-208ENST00000588667 CAMK2N2Q96S95 79 aa12.99□□□□□ -0.33
ATG4D-208ENST00000588667 MIR7-3HGQ8N6C7 128 aa12.99□□□□□ -0.33
ATG4D-208ENST00000588667 LINC00308Q8TCZ7 52 aa12.99□□□□□ -0.33
ATG4D-208ENST00000588667 HERC2O95714 4834 aa12.98□□□□□ -0.33
ATG4D-208ENST00000588667 NPC2P61916 151 aa12.98□□□□□ -0.33
ATG4D-208ENST00000588667 C10orf25Q5T742 122 aa12.98□□□□□ -0.33
ATG4D-208ENST00000588667 PPDPFQ9H3Y8 114 aa12.98□□□□□ -0.33
ATG4D-208ENST00000588667 FAM30AQ9NZY2 134 aa12.98□□□□□ -0.33
ATG4D-208ENST00000588667 A4D1N5 150 aa12.97□□□□□ -0.33
ATG4D-208ENST00000588667 TRBV30A0A0K0K1B3 111 aa12.96□□□□□ -0.33
ATG4D-208ENST00000588667 XGP55808 180 aa12.96□□□□□ -0.33
ATG4D-208ENST00000588667 A0A1B0GWB2 263 aa12.95□□□□□ -0.34
ATG4D-208ENST00000588667 SDIM1Q6ZPB5 146 aa12.95□□□□□ -0.34
ATG4D-208ENST00000588667 CARD19Q96LW7 228 aa12.95□□□□□ -0.34
ATG4D-208ENST00000588667 SYCNQ0VAF6 134 aa12.94□□□□□ -0.34
ATG4D-208ENST00000588667 C9orf116Q5BN46 136 aaPredicted RBP12.94□□□□□ -0.34
ATG4D-208ENST00000588667 C6orf48Q9UBA6 75 aa12.94□□□□□ -0.34
ATG4D-208ENST00000588667 K7ERJ3 54 aa12.93□□□□□ -0.34
ATG4D-208ENST00000588667 Q6ZRU5 148 aa12.93□□□□□ -0.34
ATG4D-208ENST00000588667 TAX1BP3O14907 124 aa12.92□□□□□ -0.34
ATG4D-208ENST00000588667 SOSTDC1Q6X4U4 206 aa12.92□□□□□ -0.34
ATG4D-208ENST00000588667 EIF4EBP3O60516 100 aaPredicted RBP12.91□□□□□ -0.34
ATG4D-208ENST00000588667 CFC1BP0CG36 223 aa12.91□□□□□ -0.34
ATG4D-208ENST00000588667 CFC1P0CG37 223 aa12.91□□□□□ -0.34
ATG4D-208ENST00000588667 A0A0B4J2C4 111 aa12.91□□□□□ -0.34
ATG4D-208ENST00000588667 HAMPP81172 84 aa12.91□□□□□ -0.34
ATG4D-208ENST00000588667 RAB37Q96AX2 223 aa12.91□□□□□ -0.34
ATG4D-208ENST00000588667 PKIGQ9Y2B9 76 aa12.89□□□□□ -0.35
ATG4D-208ENST00000588667 SND1-IT1Q9HBX3 110 aa12.88□□□□□ -0.35
ATG4D-208ENST00000588667 RNF151Q2KHN1 245 aa12.88□□□□□ -0.35
ATG4D-208ENST00000588667 SCXQ7RTU7 201 aa12.88□□□□□ -0.35
ATG4D-208ENST00000588667 PRO1854Q9UHT4 67 aa12.88□□□□□ -0.35
ATG4D-208ENST00000588667 LOC107984156A0A0G2JMH3 177 aa12.87□□□□□ -0.35
ATG4D-208ENST00000588667 ARL17AQ8IVW1 177 aa12.87□□□□□ -0.35
ATG4D-208ENST00000588667 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.87□□□□□ -0.35
ATG4D-208ENST00000588667 C9orf118A6NHY6 69 aa12.86□□□□□ -0.35
ATG4D-208ENST00000588667 NDUFC2-KCTD14E9PQ53 114 aa12.84□□□□□ -0.35
ATG4D-208ENST00000588667 PANO1I0J062 215 aa12.84□□□□□ -0.35
ATG4D-208ENST00000588667 Q8N1X5 172 aa12.84□□□□□ -0.35
ATG4D-208ENST00000588667 CIRBP-AS1Q8TBR5 109 aa12.84□□□□□ -0.35
ATG4D-208ENST00000588667 A0A1B0GV90 55 aa12.84□□□□□ -0.35
ATG4D-208ENST00000588667 CHTF8P0CG12 524 aa12.83□□□□□ -0.36
ATG4D-208ENST00000588667 SPACA4Q8TDM5 124 aa12.83□□□□□ -0.36
ATG4D-208ENST00000588667 H3BUT2 72 aa12.82□□□□□ -0.36
ATG4D-208ENST00000588667 KRTAP17-1Q9BYP8 105 aa12.82□□□□□ -0.36
ATG4D-208ENST00000588667 FAT1Q14517 4588 aa12.81□□□□□ -0.36
ATG4D-208ENST00000588667 A0A096LNI7 61 aa12.81□□□□□ -0.36
ATG4D-208ENST00000588667 LOC107984640A0A0U1RRK4 108 aa12.81□□□□□ -0.36
ATG4D-208ENST00000588667 IGKV2-24A0A0C4DH68 120 aa12.8□□□□□ -0.36
ATG4D-208ENST00000588667 NDUFC2O95298 119 aa12.8□□□□□ -0.36
ATG4D-208ENST00000588667 TLX1NBP0CAT3 122 aa12.8□□□□□ -0.36
ATG4D-208ENST00000588667 SMR3BP02814 79 aaPredicted RBP12.8□□□□□ -0.36
ATG4D-208ENST00000588667 LINC00474Q9P2X8 69 aa12.8□□□□□ -0.36
ATG4D-208ENST00000588667 TRAV13-2A0A0B4J235 113 aa12.79□□□□□ -0.36
ATG4D-208ENST00000588667 TSPAN13O95857 204 aa12.79□□□□□ -0.36
ATG4D-208ENST00000588667 DPH3Q96FX2 82 aa12.78□□□□□ -0.36
ATG4D-208ENST00000588667 NAA38Q9BRA0 125 aaKnown RBP12.78□□□□□ -0.36
ATG4D-208ENST00000588667 RPL13AP40429 203 aaKnown RBP12.77□□□□□ -0.36
ATG4D-208ENST00000588667 Q1RN00 199 aa12.77□□□□□ -0.36
ATG4D-208ENST00000588667 Q6ZRP5 223 aa12.77□□□□□ -0.36
ATG4D-208ENST00000588667 XAGE1AQ9HD64 81 aa12.77□□□□□ -0.36
ATG4D-208ENST00000588667 IGKV2-28A0A075B6P5 120 aa12.77□□□□□ -0.37
ATG4D-208ENST00000588667 A0A087WYN8 130 aa12.77□□□□□ -0.37
ATG4D-208ENST00000588667 A0A1W2PPM0 123 aa12.77□□□□□ -0.37
ATG4D-208ENST00000588667 H7C2G1 150 aa12.77□□□□□ -0.37
ATG4D-208ENST00000588667 IGKV2D-28P01615 120 aa12.77□□□□□ -0.37
ATG4D-208ENST00000588667 RPL18AQ02543 176 aaKnown RBP12.77□□□□□ -0.37
ATG4D-208ENST00000588667 GAGE2EQ4V326 116 aa12.77□□□□□ -0.37
ATG4D-208ENST00000588667 GAGE2DQ9UEU5 116 aa12.77□□□□□ -0.37
ATG4D-208ENST00000588667 GAGE2BQ13066 116 aa12.76□□□□□ -0.37
ATG4D-208ENST00000588667 EPM2AB3EWF7 344 aa12.75□□□□□ -0.37
ATG4D-208ENST00000588667 FABP2P12104 132 aa12.75□□□□□ -0.37
ATG4D-208ENST00000588667 VAMP3Q15836 100 aa12.74□□□□□ -0.37
ATG4D-208ENST00000588667 Q5VSD8 79 aa12.74□□□□□ -0.37
ATG4D-208ENST00000588667 LINC00528Q8N1L1 170 aa12.74□□□□□ -0.37
ATG4D-208ENST00000588667 PLAC8Q9NZF1 115 aa12.74□□□□□ -0.37
ATG4D-208ENST00000588667 FAM229AH3BQW9 127 aa12.73□□□□□ -0.37
ATG4D-208ENST00000588667 LINC00337Q8N6G1 96 aa12.73□□□□□ -0.37
ATG4D-208ENST00000588667 PSMB2P49721 201 aa12.73□□□□□ -0.37
ATG4D-208ENST00000588667 KRTAP4-5Q9BYR2 181 aa12.73□□□□□ -0.37
ATG4D-208ENST00000588667 LYRM7Q5U5X0 104 aa12.72□□□□□ -0.37
ATG4D-208ENST00000588667 OR13C6PQ8NH95 151 aa12.71□□□□□ -0.37
ATG4D-208ENST00000588667 TRBV10-2A0A0K0K1G8 114 aa12.7□□□□□ -0.38
ATG4D-208ENST00000588667 PRR3P79522 188 aaKnown RBP12.7□□□□□ -0.38
ATG4D-208ENST00000588667 Q8NDZ9 215 aa12.7□□□□□ -0.38
ATG4D-208ENST00000588667 VPS13BQ7Z7G8 4022 aa12.69□□□□□ -0.38
ATG4D-208ENST00000588667 NCR3O14931 201 aa12.69□□□□□ -0.38
ATG4D-208ENST00000588667 C9orf129Q5T035 196 aaKnown RBP12.69□□□□□ -0.38
ATG4D-208ENST00000588667 TMEM126AQ9H061 195 aa12.68□□□□□ -0.38
ATG4D-208ENST00000588667 SPCS1Q9Y6A9 102 aa12.68□□□□□ -0.38
ATG4D-208ENST00000588667 COX6CP09669 75 aa12.67□□□□□ -0.38
ATG4D-208ENST00000588667 SCGB1C2P0DMR2 95 aa12.67□□□□□ -0.38
ATG4D-208ENST00000588667 VPREB1P12018 145 aa12.67□□□□□ -0.38
ATG4D-208ENST00000588667 PLA2G1BP04054 148 aaKnown RBP12.66□□□□□ -0.38
ATG4D-208ENST00000588667 S100A7L2Q5SY68 101 aa12.66□□□□□ -0.38
ATG4D-208ENST00000588667 GTF2H5Q6ZYL4 71 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms