RNA–Protein interactions for RNA: ENST00000588275.2

LINC01842-201, Transcript of long intergenic non-protein coding RNA 1842, humanhuman

TSL 1 (best) BASIC

Gene LINC01842, Length 768 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01842-201ENST00000588275 A0A0U1RRA0 63 aa9.62□□□□□ -0.87
LINC01842-201ENST00000588275 C11orf86A6NJI1 115 aa9.62□□□□□ -0.87
LINC01842-201ENST00000588275 LINC00158P58513 81 aa9.62□□□□□ -0.87
LINC01842-201ENST00000588275 CTAG1AP78358 180 aa9.62□□□□□ -0.87
LINC01842-201ENST00000588275 HBDP02042 147 aa9.61□□□□□ -0.87
LINC01842-201ENST00000588275 BAGE3Q86Y29 109 aa9.61□□□□□ -0.87
LINC01842-201ENST00000588275 SPRR4Q96PI1 79 aa9.61□□□□□ -0.87
LINC01842-201ENST00000588275 C4orf48Q5BLP8 95 aa9.6□□□□□ -0.87
LINC01842-201ENST00000588275 SPAG11AQ6PDA7 123 aa9.6□□□□□ -0.87
LINC01842-201ENST00000588275 SFTA2Q6UW10 78 aa9.6□□□□□ -0.87
LINC01842-201ENST00000588275 URB1-AS1Q96HZ7 61 aa9.6□□□□□ -0.87
LINC01842-201ENST00000588275 SEC11CQ9BY50 192 aa9.6□□□□□ -0.87
LINC01842-201ENST00000588275 LINC00614P0C842 121 aa9.59□□□□□ -0.87
LINC01842-201ENST00000588275 C18orf32Q8TCD1 76 aa9.59□□□□□ -0.87
LINC01842-201ENST00000588275 ZNF706Q9Y5V0 76 aaPredicted RBP9.59□□□□□ -0.87
LINC01842-201ENST00000588275 DAND5Q8N907 189 aa9.58□□□□□ -0.88
LINC01842-201ENST00000588275 RPS10P5Q9NQ39 176 aa9.58□□□□□ -0.88
LINC01842-201ENST00000588275 LINC00337Q8N6G1 96 aa9.57□□□□□ -0.88
LINC01842-201ENST00000588275 TRAPPC1Q9Y5R8 145 aa9.57□□□□□ -0.88
LINC01842-201ENST00000588275 NCR3O14931 201 aa9.56□□□□□ -0.88
LINC01842-201ENST00000588275 ATP6V1G1O75348 118 aa9.56□□□□□ -0.88
LINC01842-201ENST00000588275 Q8NBF4 154 aa9.56□□□□□ -0.88
LINC01842-201ENST00000588275 CHTOPQ9Y3Y2 248 aaKnown RBP9.56□□□□□ -0.88
LINC01842-201ENST00000588275 KRTAP9-6A0A140TA67 174 aa9.55□□□□□ -0.88
LINC01842-201ENST00000588275 PRYO14603 147 aa9.55□□□□□ -0.88
LINC01842-201ENST00000588275 FP248Q71RG6 208 aaPredicted RBP9.55□□□□□ -0.88
LINC01842-201ENST00000588275 SMIM13P0DJ93 91 aa9.54□□□□□ -0.88
LINC01842-201ENST00000588275 MEIG1Q5JSS6 88 aa9.54□□□□□ -0.88
LINC01842-201ENST00000588275 BOD1L2Q8IYS8 172 aa9.54□□□□□ -0.88
LINC01842-201ENST00000588275 RHEBQ15382 184 aa9.53□□□□□ -0.88
LINC01842-201ENST00000588275 COMMD7Q86VX2 200 aa9.53□□□□□ -0.88
LINC01842-201ENST00000588275 ETDCA0A1B0GVM5 59 aa9.52□□□□□ -0.89
LINC01842-201ENST00000588275 TMEM223A0PJW6 202 aa9.52□□□□□ -0.89
LINC01842-201ENST00000588275 SMCR5Q8TEV8 140 aa9.52□□□□□ -0.89
LINC01842-201ENST00000588275 IFITM2Q01629 132 aa9.5□□□□□ -0.89
LINC01842-201ENST00000588275 KRTAP13-3Q3SY46 172 aa9.5□□□□□ -0.89
LINC01842-201ENST00000588275 MIR7-3HGQ8N6C7 128 aa9.5□□□□□ -0.89
LINC01842-201ENST00000588275 TRBV10-3A0A0K0K1G6 114 aa9.48□□□□□ -0.89
LINC01842-201ENST00000588275 SPINK1P00995 79 aa9.48□□□□□ -0.89
LINC01842-201ENST00000588275 GAGE2AQ6NT46 116 aa9.48□□□□□ -0.89
LINC01842-201ENST00000588275 IGLV9-49A0A0B4J1Y8 123 aa9.47□□□□□ -0.89
LINC01842-201ENST00000588275 SPRR1AP35321 89 aa9.47□□□□□ -0.89
LINC01842-201ENST00000588275 C10orf91Q5T1B1 145 aa9.47□□□□□ -0.89
LINC01842-201ENST00000588275 KCNQ1DNQ9H478 68 aa9.47□□□□□ -0.89
LINC01842-201ENST00000588275 S100A12P80511 92 aa9.46□□□□□ -0.9
LINC01842-201ENST00000588275 MOBPQ13875 183 aa9.46□□□□□ -0.9
LINC01842-201ENST00000588275 ASB16-AS1Q495Z4 193 aa9.46□□□□□ -0.9
LINC01842-201ENST00000588275 IFI27L1Q96BM0 104 aa9.46□□□□□ -0.9
LINC01842-201ENST00000588275 NDUFA12Q9UI09 145 aa9.46□□□□□ -0.9
LINC01842-201ENST00000588275 TRAV12-1A0A0B4J245 112 aa9.45□□□□□ -0.9
LINC01842-201ENST00000588275 KRTAP4-16G5E9R7 235 aaPredicted RBP9.45□□□□□ -0.9
LINC01842-201ENST00000588275 LINC01547P58512 204 aaPredicted RBP9.45□□□□□ -0.9
LINC01842-201ENST00000588275 HERV-K104P63124 156 aa9.45□□□□□ -0.9
LINC01842-201ENST00000588275 LINC00483Q53H64 154 aa9.44□□□□□ -0.9
LINC01842-201ENST00000588275 SEC61BP60468 96 aaKnown RBP9.43□□□□□ -0.9
LINC01842-201ENST00000588275 MAP1LC3CQ9BXW4 147 aa9.43□□□□□ -0.9
LINC01842-201ENST00000588275 LINC00587B1AMM8 73 aa9.42□□□□□ -0.9
LINC01842-201ENST00000588275 H0Y8G0 127 aa9.42□□□□□ -0.9
LINC01842-201ENST00000588275 KRTAP4-1Q9BYQ7 146 aa9.42□□□□□ -0.9
LINC01842-201ENST00000588275 MYMXA0A1B0GTQ4 84 aa9.41□□□□□ -0.9
LINC01842-201ENST00000588275 B5MCH6 92 aa9.41□□□□□ -0.9
LINC01842-201ENST00000588275 ERC2-IT1O76042 136 aa9.41□□□□□ -0.9
LINC01842-201ENST00000588275 FAM19A2Q8N3H0 131 aa9.41□□□□□ -0.9
LINC01842-201ENST00000588275 CHCHD1Q96BP2 118 aaKnown RBP9.41□□□□□ -0.9
LINC01842-201ENST00000588275 APOC3P02656 99 aa9.4□□□□□ -0.9
LINC01842-201ENST00000588275 DDTP30046 118 aa9.4□□□□□ -0.9
LINC01842-201ENST00000588275 Q8N377 158 aa9.39□□□□□ -0.91
LINC01842-201ENST00000588275 SSBP3-AS1Q7Z2R9 100 aa9.38□□□□□ -0.91
LINC01842-201ENST00000588275 HSBP1O75506 76 aa9.37□□□□□ -0.91
LINC01842-201ENST00000588275 TSPEAR-AS2P59090 65 aa9.37□□□□□ -0.91
LINC01842-201ENST00000588275 C9orf153Q5TBE3 101 aa9.37□□□□□ -0.91
LINC01842-201ENST00000588275 Q9BRP9 147 aa9.37□□□□□ -0.91
LINC01842-201ENST00000588275 SLC25A20O43772 301 aa9.36□□□□□ -0.91
LINC01842-201ENST00000588275 SNAPINO95295 136 aa9.36□□□□□ -0.91
LINC01842-201ENST00000588275 RPS29P62273 56 aaKnown RBP9.36□□□□□ -0.91
LINC01842-201ENST00000588275 Q6ZRX8 168 aa9.36□□□□□ -0.91
LINC01842-201ENST00000588275 MIEN1Q9BRT3 115 aa9.36□□□□□ -0.91
LINC01842-201ENST00000588275 NDUFA5Q16718 116 aa9.35□□□□□ -0.91
LINC01842-201ENST00000588275 S100A7L2Q5SY68 101 aa9.35□□□□□ -0.91
LINC01842-201ENST00000588275 TRBV10-2A0A0K0K1G8 114 aa9.34□□□□□ -0.91
LINC01842-201ENST00000588275 LEPROTO15243 131 aa9.34□□□□□ -0.91
LINC01842-201ENST00000588275 SVBPQ8N300 66 aa9.34□□□□□ -0.91
LINC01842-201ENST00000588275 SPANXB1Q9NS25 103 aaPredicted RBP9.34□□□□□ -0.91
LINC01842-201ENST00000588275 TRAV23DV6A0A075B6W5 121 aa9.31□□□□□ -0.92
LINC01842-201ENST00000588275 LOC107984156A0A0G2JMH3 177 aa9.31□□□□□ -0.92
LINC01842-201ENST00000588275 J3QQQ9 107 aa9.31□□□□□ -0.92
LINC01842-201ENST00000588275 NPC2P61916 151 aa9.31□□□□□ -0.92
LINC01842-201ENST00000588275 XP32Q5T750 250 aa9.31□□□□□ -0.92
LINC01842-201ENST00000588275 ARL17AQ8IVW1 177 aa9.31□□□□□ -0.92
LINC01842-201ENST00000588275 JOSD1Q15040 202 aaPredicted RBP9.3□□□□□ -0.92
LINC01842-201ENST00000588275 LEPROTL1O95214 131 aa9.29□□□□□ -0.92
LINC01842-201ENST00000588275 IGLV6-57P01721 117 aa9.29□□□□□ -0.92
LINC01842-201ENST00000588275 LGALS3P17931 250 aaKnown RBP9.29□□□□□ -0.92
LINC01842-201ENST00000588275 HERVK_113P61574 105 aa9.29□□□□□ -0.92
LINC01842-201ENST00000588275 ST20-AS1Q8NBB2 130 aa9.29□□□□□ -0.92
LINC01842-201ENST00000588275 YPEL4Q96NS1 127 aa9.29□□□□□ -0.92
LINC01842-201ENST00000588275 PLNP26678 52 aa9.28□□□□□ -0.92
LINC01842-201ENST00000588275 PMCHL2Q9BQD1 86 aa9.28□□□□□ -0.92
LINC01842-201ENST00000588275 ZNF73O43830 326 aaPredicted RBP9.27□□□□□ -0.93
LINC01842-201ENST00000588275 NDUFC2O95298 119 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms