RNA–Protein interactions for RNA: ENST00000588230.5

CIRBP-217, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5 BASIC

Gene CIRBP, Length 1,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-217ENST00000588230 GAGE10A6NGK3 116 aa11.7□□□□□ -0.54
CIRBP-217ENST00000588230 A0A0U1RRA0 63 aa11.69□□□□□ -0.54
CIRBP-217ENST00000588230 RPL37AP8A6NKH3 93 aa11.69□□□□□ -0.54
CIRBP-217ENST00000588230 IGKCP01834 107 aa11.69□□□□□ -0.54
CIRBP-217ENST00000588230 NDUFA12Q9UI09 145 aa11.69□□□□□ -0.54
CIRBP-217ENST00000588230 ATP6V1G1O75348 118 aa11.68□□□□□ -0.54
CIRBP-217ENST00000588230 HERVK_113P61574 105 aa11.68□□□□□ -0.54
CIRBP-217ENST00000588230 HERV-K104P63124 156 aa11.68□□□□□ -0.54
CIRBP-217ENST00000588230 RPL24P83731 157 aaKnown RBP11.68□□□□□ -0.54
CIRBP-217ENST00000588230 MEIG1Q5JSS6 88 aa11.68□□□□□ -0.54
CIRBP-217ENST00000588230 MYMXA0A1B0GTQ4 84 aa11.67□□□□□ -0.54
CIRBP-217ENST00000588230 LEPROTO15243 131 aa11.67□□□□□ -0.54
CIRBP-217ENST00000588230 PLEKHB2Q96CS7 222 aa11.67□□□□□ -0.54
CIRBP-217ENST00000588230 H0Y9J4 135 aa11.66□□□□□ -0.54
CIRBP-217ENST00000588230 SMIM13P0DJ93 91 aa11.66□□□□□ -0.54
CIRBP-217ENST00000588230 LINC00587B1AMM8 73 aa11.65□□□□□ -0.54
CIRBP-217ENST00000588230 SYS1-DBNDD2H3BUS1 97 aa11.65□□□□□ -0.54
CIRBP-217ENST00000588230 VPREB1P12018 145 aa11.65□□□□□ -0.54
CIRBP-217ENST00000588230 ZNF861PO60384 105 aa11.64□□□□□ -0.55
CIRBP-217ENST00000588230 S100A1P23297 94 aa11.64□□□□□ -0.55
CIRBP-217ENST00000588230 J3QQQ9 107 aa11.63□□□□□ -0.55
CIRBP-217ENST00000588230 BCE1O60756 84 aa11.63□□□□□ -0.55
CIRBP-217ENST00000588230 TSPEAR-AS2P59090 65 aa11.63□□□□□ -0.55
CIRBP-217ENST00000588230 COA6Q5JTJ3 125 aaKnown RBP11.63□□□□□ -0.55
CIRBP-217ENST00000588230 LGALS3P17931 250 aaKnown RBP11.62□□□□□ -0.55
CIRBP-217ENST00000588230 KRTAP10-8P60410 259 aa11.62□□□□□ -0.55
CIRBP-217ENST00000588230 IGKV2-28A0A075B6P5 120 aa11.61□□□□□ -0.55
CIRBP-217ENST00000588230 IGKV2D-28P01615 120 aa11.61□□□□□ -0.55
CIRBP-217ENST00000588230 MIR7-3HGQ8N6C7 128 aa11.61□□□□□ -0.55
CIRBP-217ENST00000588230 RPL28P46779 137 aaKnown RBP11.6□□□□□ -0.55
CIRBP-217ENST00000588230 PET117Q6UWS5 81 aa11.6□□□□□ -0.55
CIRBP-217ENST00000588230 Q8NDZ9 215 aa11.6□□□□□ -0.55
CIRBP-217ENST00000588230 UBR4Q5T4S7 5183 aa11.59□□□□□ -0.55
CIRBP-217ENST00000588230 NMUP48645 174 aa11.59□□□□□ -0.55
CIRBP-217ENST00000588230 IGLV1-50A0A075B6I6 118 aa11.58□□□□□ -0.56
CIRBP-217ENST00000588230 LINC01545Q5VT33 79 aa11.58□□□□□ -0.56
CIRBP-217ENST00000588230 BOD1L2Q8IYS8 172 aa11.58□□□□□ -0.56
CIRBP-217ENST00000588230 UBE2AP49459 152 aa11.57□□□□□ -0.56
CIRBP-217ENST00000588230 E9PLD3 99 aa11.56□□□□□ -0.56
CIRBP-217ENST00000588230 C3orf79P0CE67 100 aa11.56□□□□□ -0.56
CIRBP-217ENST00000588230 M0R378 163 aa11.55□□□□□ -0.56
CIRBP-217ENST00000588230 KRTDAPP60985 99 aa11.55□□□□□ -0.56
CIRBP-217ENST00000588230 PRR26Q8N8Z3 221 aa11.55□□□□□ -0.56
CIRBP-217ENST00000588230 KRTAP1-4P0C5Y4 121 aa11.54□□□□□ -0.56
CIRBP-217ENST00000588230 LRP2P98164 4655 aa11.53□□□□□ -0.56
CIRBP-217ENST00000588230 TMEM238C9JI98 176 aa11.53□□□□□ -0.56
CIRBP-217ENST00000588230 DAND5Q8N907 189 aa11.53□□□□□ -0.56
CIRBP-217ENST00000588230 TMEM126AQ9H061 195 aa11.53□□□□□ -0.56
CIRBP-217ENST00000588230 NCR3O14931 201 aa11.51□□□□□ -0.57
CIRBP-217ENST00000588230 FAM19A1Q7Z5A9 133 aa11.51□□□□□ -0.57
CIRBP-217ENST00000588230 C20orf202A1L168 122 aa11.5□□□□□ -0.57
CIRBP-217ENST00000588230 KRTAP13-1Q8IUC0 172 aa11.5□□□□□ -0.57
CIRBP-217ENST00000588230 MIEN1Q9BRT3 115 aa11.5□□□□□ -0.57
CIRBP-217ENST00000588230 IGKV2D-26A0A0A0MRZ7 120 aa11.49□□□□□ -0.57
CIRBP-217ENST00000588230 A0A0J9YXY3 114 aa11.49□□□□□ -0.57
CIRBP-217ENST00000588230 PRLHP81277 87 aa11.49□□□□□ -0.57
CIRBP-217ENST00000588230 LOC107984156A0A0G2JMH3 177 aa11.48□□□□□ -0.57
CIRBP-217ENST00000588230 ARL17AQ8IVW1 177 aa11.48□□□□□ -0.57
CIRBP-217ENST00000588230 RPL13AP40429 203 aaKnown RBP11.47□□□□□ -0.57
CIRBP-217ENST00000588230 PRYO14603 147 aa11.45□□□□□ -0.58
CIRBP-217ENST00000588230 ADAMTSL4-AS1Q5T5F5 129 aa11.45□□□□□ -0.58
CIRBP-217ENST00000588230 TRBV10-3A0A0K0K1G6 114 aa11.44□□□□□ -0.58
CIRBP-217ENST00000588230 ZNF815PA8K554 130 aa11.44□□□□□ -0.58
CIRBP-217ENST00000588230 S100A12P80511 92 aa11.44□□□□□ -0.58
CIRBP-217ENST00000588230 S100A2P29034 98 aa11.43□□□□□ -0.58
CIRBP-217ENST00000588230 AKR1D1P51857 326 aa11.43□□□□□ -0.58
CIRBP-217ENST00000588230 NPC2P61916 151 aa11.43□□□□□ -0.58
CIRBP-217ENST00000588230 KCNQ1DNQ9H478 68 aa11.43□□□□□ -0.58
CIRBP-217ENST00000588230 TRBV10-2A0A0K0K1G8 114 aa11.42□□□□□ -0.58
CIRBP-217ENST00000588230 S100A6P06703 90 aa11.42□□□□□ -0.58
CIRBP-217ENST00000588230 SPANXB1Q9NS25 103 aaPredicted RBP11.42□□□□□ -0.58
CIRBP-217ENST00000588230 TIMM17BO60830 172 aa11.41□□□□□ -0.58
CIRBP-217ENST00000588230 NDUFC2O95298 119 aa11.41□□□□□ -0.58
CIRBP-217ENST00000588230 CRYGAP11844 174 aa11.41□□□□□ -0.58
CIRBP-217ENST00000588230 ATOH7Q8N100 152 aa11.41□□□□□ -0.58
CIRBP-217ENST00000588230 HIST3H2BBQ8N257 126 aa11.41□□□□□ -0.58
CIRBP-217ENST00000588230 HIGD2AQ9BW72 106 aa11.41□□□□□ -0.58
CIRBP-217ENST00000588230 TTTY13Q9BZ97 58 aa11.41□□□□□ -0.58
CIRBP-217ENST00000588230 DDTP30046 118 aa11.4□□□□□ -0.58
CIRBP-217ENST00000588230 SOSTDC1Q6X4U4 206 aa11.4□□□□□ -0.58
CIRBP-217ENST00000588230 ANAPC11Q9NYG5 84 aa11.4□□□□□ -0.58
CIRBP-217ENST00000588230 ETDCA0A1B0GVM5 59 aa11.39□□□□□ -0.59
CIRBP-217ENST00000588230 LINC00337Q8N6G1 96 aa11.39□□□□□ -0.59
CIRBP-217ENST00000588230 HIST1H2BLQ99880 126 aa11.39□□□□□ -0.59
CIRBP-217ENST00000588230 A0A087X002 238 aa11.38□□□□□ -0.59
CIRBP-217ENST00000588230 EIF4EBP3O60516 100 aaPredicted RBP11.38□□□□□ -0.59
CIRBP-217ENST00000588230 SPRR1AP35321 89 aa11.38□□□□□ -0.59
CIRBP-217ENST00000588230 ANKRD39Q53RE8 183 aa11.38□□□□□ -0.59
CIRBP-217ENST00000588230 S100A7L2Q5SY68 101 aa11.38□□□□□ -0.59
CIRBP-217ENST00000588230 LITAFQ99732 161 aa11.38□□□□□ -0.59
CIRBP-217ENST00000588230 LINC00308Q8TCZ7 52 aa11.37□□□□□ -0.59
CIRBP-217ENST00000588230 FAM229BQ4G0N7 80 aa11.36□□□□□ -0.59
CIRBP-217ENST00000588230 TYMSOSQ8TAI1 123 aa11.36□□□□□ -0.59
CIRBP-217ENST00000588230 SCGB1D4Q6XE38 83 aa11.35□□□□□ -0.59
CIRBP-217ENST00000588230 KRTAP4-16G5E9R7 235 aaPredicted RBP11.34□□□□□ -0.59
CIRBP-217ENST00000588230 IGLV6-57P01721 117 aa11.34□□□□□ -0.59
CIRBP-217ENST00000588230 SNRPEP62304 92 aaKnown RBP11.34□□□□□ -0.59
CIRBP-217ENST00000588230 SPANXCQ9NY87 97 aa11.33□□□□□ -0.6
CIRBP-217ENST00000588230 SMCR5Q8TEV8 140 aa11.31□□□□□ -0.6
CIRBP-217ENST00000588230 ZNF706Q9Y5V0 76 aaPredicted RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms