RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 Q6ZVH6 145 aa7.3□□□□□ -1.24
VMP1-207ENST00000588131 SND1-IT1Q9HBX3 110 aa7.3□□□□□ -1.24
VMP1-207ENST00000588131 TLX1NBP0CAT3 122 aa7.29□□□□□ -1.24
VMP1-207ENST00000588131 RPL18AQ02543 176 aaKnown RBP7.29□□□□□ -1.24
VMP1-207ENST00000588131 LINC01620Q4KN68 170 aa7.29□□□□□ -1.24
VMP1-207ENST00000588131 EREGO14944 169 aa7.28□□□□□ -1.24
VMP1-207ENST00000588131 IFITM1P13164 125 aa7.28□□□□□ -1.24
VMP1-207ENST00000588131 PTTG1IPP53801 180 aa7.28□□□□□ -1.24
VMP1-207ENST00000588131 GAGE2EQ4V326 116 aa7.28□□□□□ -1.24
VMP1-207ENST00000588131 C9orf163Q8N9P6 203 aa7.28□□□□□ -1.24
VMP1-207ENST00000588131 XAGE1AQ9HD64 81 aa7.28□□□□□ -1.24
VMP1-207ENST00000588131 GAGE2DQ9UEU5 116 aa7.28□□□□□ -1.24
VMP1-207ENST00000588131 LOC107984640A0A0U1RRK4 108 aa7.27□□□□□ -1.25
VMP1-207ENST00000588131 A4D1N5 150 aa7.27□□□□□ -1.25
VMP1-207ENST00000588131 M0R143 59 aa7.27□□□□□ -1.25
VMP1-207ENST00000588131 BATFQ16520 125 aa7.27□□□□□ -1.25
VMP1-207ENST00000588131 SNHG12Q9BXW3 62 aa7.27□□□□□ -1.25
VMP1-207ENST00000588131 LOC107984156A0A0G2JMH3 177 aa7.26□□□□□ -1.25
VMP1-207ENST00000588131 KRTAP10-2P60368 255 aa7.26□□□□□ -1.25
VMP1-207ENST00000588131 GAGE2BQ13066 116 aa7.26□□□□□ -1.25
VMP1-207ENST00000588131 C9orf129Q5T035 196 aaKnown RBP7.26□□□□□ -1.25
VMP1-207ENST00000588131 ARL17AQ8IVW1 177 aa7.26□□□□□ -1.25
VMP1-207ENST00000588131 Q8NDZ9 215 aa7.26□□□□□ -1.25
VMP1-207ENST00000588131 DNAH5Q8TE73 4624 aa7.25□□□□□ -1.25
VMP1-207ENST00000588131 A0A096LNI7 61 aa7.25□□□□□ -1.25
VMP1-207ENST00000588131 IGLV5-52A0A0A0MRZ9 124 aa7.25□□□□□ -1.25
VMP1-207ENST00000588131 RPL24P83731 157 aaKnown RBP7.25□□□□□ -1.25
VMP1-207ENST00000588131 PPDPFQ9H3Y8 114 aa7.25□□□□□ -1.25
VMP1-207ENST00000588131 SDIM1Q6ZPB5 146 aa7.24□□□□□ -1.25
VMP1-207ENST00000588131 KRTAP4-8Q9BYQ9 185 aa7.24□□□□□ -1.25
VMP1-207ENST00000588131 NHP2Q9NX24 153 aaKnown RBP7.24□□□□□ -1.25
VMP1-207ENST00000588131 PKD1P98161 4303 aa7.23□□□□□ -1.25
VMP1-207ENST00000588131 C16orf90A8MZG2 172 aa7.23□□□□□ -1.25
VMP1-207ENST00000588131 K7ERJ3 54 aa7.23□□□□□ -1.25
VMP1-207ENST00000588131 CHTF8P0CG12 524 aa7.23□□□□□ -1.25
VMP1-207ENST00000588131 LINC00336Q6ZUF6 198 aa7.23□□□□□ -1.25
VMP1-207ENST00000588131 COPS9Q8WXC6 57 aa7.23□□□□□ -1.25
VMP1-207ENST00000588131 IGKV2-28A0A075B6P5 120 aa7.22□□□□□ -1.25
VMP1-207ENST00000588131 IGKV2-24A0A0C4DH68 120 aa7.22□□□□□ -1.25
VMP1-207ENST00000588131 TMEM238LA0A1B0GVL6 79 aa7.22□□□□□ -1.25
VMP1-207ENST00000588131 FAM168BA1KXE4 195 aa7.22□□□□□ -1.25
VMP1-207ENST00000588131 IGKV2D-28P01615 120 aa7.22□□□□□ -1.25
VMP1-207ENST00000588131 CFC1BP0CG36 223 aa7.22□□□□□ -1.25
VMP1-207ENST00000588131 CFC1P0CG37 223 aa7.22□□□□□ -1.25
VMP1-207ENST00000588131 PRR3P79522 188 aaKnown RBP7.22□□□□□ -1.25
VMP1-207ENST00000588131 A0A1B0GWB2 263 aa7.21□□□□□ -1.26
VMP1-207ENST00000588131 PANO1I0J062 215 aa7.21□□□□□ -1.26
VMP1-207ENST00000588131 VPREB1P12018 145 aa7.21□□□□□ -1.26
VMP1-207ENST00000588131 SERTAD4-AS1Q5TG53 156 aa7.21□□□□□ -1.26
VMP1-207ENST00000588131 KRTAP7-1Q8IUC3 87 aa7.21□□□□□ -1.26
VMP1-207ENST00000588131 HECTD4Q9Y4D8 3996 aa7.21□□□□□ -1.26
VMP1-207ENST00000588131 DNAH8Q96JB1 4490 aa7.21□□□□□ -1.26
VMP1-207ENST00000588131 A0A0B4J2C4 111 aa7.2□□□□□ -1.26
VMP1-207ENST00000588131 A0A1B0GVY2 172 aa7.2□□□□□ -1.26
VMP1-207ENST00000588131 A6NDN8 102 aa7.2□□□□□ -1.26
VMP1-207ENST00000588131 NCR3O14931 201 aa7.2□□□□□ -1.26
VMP1-207ENST00000588131 NDUFC2O95298 119 aa7.2□□□□□ -1.26
VMP1-207ENST00000588131 LINC00337Q8N6G1 96 aa7.2□□□□□ -1.26
VMP1-207ENST00000588131 PKIGQ9Y2B9 76 aa7.2□□□□□ -1.26
VMP1-207ENST00000588131 PLA2G2DQ9UNK4 145 aa7.19□□□□□ -1.26
VMP1-207ENST00000588131 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.19□□□□□ -1.26
VMP1-207ENST00000588131 A0A1W2PNN7 141 aa7.18□□□□□ -1.26
VMP1-207ENST00000588131 FAM19A5Q7Z5A7 132 aaPredicted RBP7.18□□□□□ -1.26
VMP1-207ENST00000588131 RAB37Q96AX2 223 aa7.18□□□□□ -1.26
VMP1-207ENST00000588131 KRTAP10-1P60331 282 aa7.17□□□□□ -1.26
VMP1-207ENST00000588131 SPACA4Q8TDM5 124 aa7.17□□□□□ -1.26
VMP1-207ENST00000588131 PRO1854Q9UHT4 67 aa7.17□□□□□ -1.26
VMP1-207ENST00000588131 IGLV5-37A0A075B6J1 123 aa7.16□□□□□ -1.26
VMP1-207ENST00000588131 TAX1BP3O14907 124 aa7.16□□□□□ -1.26
VMP1-207ENST00000588131 RPL13AP40429 203 aaKnown RBP7.16□□□□□ -1.26
VMP1-207ENST00000588131 COL5A1-AS1Q5SY13 56 aa7.16□□□□□ -1.26
VMP1-207ENST00000588131 TRAV13-2A0A0B4J235 113 aa7.15□□□□□ -1.26
VMP1-207ENST00000588131 TRBV10-2A0A0K0K1G8 114 aa7.15□□□□□ -1.26
VMP1-207ENST00000588131 OR13C6PQ8NH95 151 aa7.15□□□□□ -1.26
VMP1-207ENST00000588131 LINC00474Q9P2X8 69 aa7.15□□□□□ -1.26
VMP1-207ENST00000588131 C22orf24Q9Y442 160 aa7.15□□□□□ -1.26
VMP1-207ENST00000588131 GAGE10A6NGK3 116 aa7.14□□□□□ -1.27
VMP1-207ENST00000588131 H7C2G1 150 aa7.14□□□□□ -1.27
VMP1-207ENST00000588131 M0R378 163 aa7.14□□□□□ -1.27
VMP1-207ENST00000588131 TSPAN13O95857 204 aa7.14□□□□□ -1.27
VMP1-207ENST00000588131 NKAPP1Q8N9T2 125 aa7.14□□□□□ -1.27
VMP1-207ENST00000588131 C7orf33Q8WU49 177 aa7.14□□□□□ -1.27
VMP1-207ENST00000588131 NAA38Q9BRA0 125 aaKnown RBP7.14□□□□□ -1.27
VMP1-207ENST00000588131 FAM30AQ9NZY2 134 aa7.14□□□□□ -1.27
VMP1-207ENST00000588131 DYNC1H1Q14204 4646 aaKnown RBP7.13□□□□□ -1.27
VMP1-207ENST00000588131 TRBV10-3A0A0K0K1G6 114 aa7.13□□□□□ -1.27
VMP1-207ENST00000588131 M0QXV9 152 aa7.13□□□□□ -1.27
VMP1-207ENST00000588131 S100A7L2Q5SY68 101 aa7.13□□□□□ -1.27
VMP1-207ENST00000588131 DPH3Q96FX2 82 aa7.13□□□□□ -1.27
VMP1-207ENST00000588131 PCLOQ9Y6V0 5065 aa7.12□□□□□ -1.27
VMP1-207ENST00000588131 A0A087WYN8 130 aa7.12□□□□□ -1.27
VMP1-207ENST00000588131 IGLV6-57P01721 117 aa7.12□□□□□ -1.27
VMP1-207ENST00000588131 PHF5AQ7RTV0 110 aaKnown RBP7.12□□□□□ -1.27
VMP1-207ENST00000588131 MRPL55Q7Z7F7 128 aaKnown RBP7.12□□□□□ -1.27
VMP1-207ENST00000588131 C9orf118A6NHY6 69 aa7.11□□□□□ -1.27
VMP1-207ENST00000588131 EPM2AB3EWF7 344 aa7.11□□□□□ -1.27
VMP1-207ENST00000588131 Q1RN00 199 aa7.11□□□□□ -1.27
VMP1-207ENST00000588131 Q6ZSA8 131 aa7.11□□□□□ -1.27
VMP1-207ENST00000588131 SMIM11BQ8TCY0 68 aa7.11□□□□□ -1.27
VMP1-207ENST00000588131 LINC00167Q96N53 147 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms