RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 SNAPINO95295 136 aa8.37□□□□□ -1.07
VMP1-206ENST00000587945 RPL24P83731 157 aaKnown RBP8.37□□□□□ -1.07
VMP1-206ENST00000587945 TMEM126AQ9H061 195 aa8.37□□□□□ -1.07
VMP1-206ENST00000587945 M0R378 163 aa8.36□□□□□ -1.07
VMP1-206ENST00000587945 COX17Q14061 63 aa8.36□□□□□ -1.07
VMP1-206ENST00000587945 RETNLBQ9BQ08 111 aa8.36□□□□□ -1.07
VMP1-206ENST00000587945 FAM229BQ4G0N7 80 aa8.35□□□□□ -1.07
VMP1-206ENST00000587945 CHTOPQ9Y3Y2 248 aaKnown RBP8.35□□□□□ -1.07
VMP1-206ENST00000587945 A0A0U1RRA0 63 aa8.34□□□□□ -1.07
VMP1-206ENST00000587945 LINC00158P58513 81 aa8.34□□□□□ -1.07
VMP1-206ENST00000587945 LINC00304Q8N9R0 145 aa8.34□□□□□ -1.07
VMP1-206ENST00000587945 IGKV2D-26A0A0A0MRZ7 120 aa8.33□□□□□ -1.08
VMP1-206ENST00000587945 PLEKHB2Q96CS7 222 aa8.32□□□□□ -1.08
VMP1-206ENST00000587945 TMEM223A0PJW6 202 aa8.31□□□□□ -1.08
VMP1-206ENST00000587945 SFTA2Q6UW10 78 aa8.31□□□□□ -1.08
VMP1-206ENST00000587945 CBLN2Q8IUK8 224 aa8.31□□□□□ -1.08
VMP1-206ENST00000587945 HIGD2AQ9BW72 106 aa8.31□□□□□ -1.08
VMP1-206ENST00000587945 C3orf22Q8N5N4 141 aa8.3□□□□□ -1.08
VMP1-206ENST00000587945 IFI27L1Q96BM0 104 aa8.3□□□□□ -1.08
VMP1-206ENST00000587945 SMIM13P0DJ93 91 aa8.29□□□□□ -1.08
VMP1-206ENST00000587945 YPEL4Q96NS1 127 aa8.29□□□□□ -1.08
VMP1-206ENST00000587945 MUC17Q685J3 4493 aa8.29□□□□□ -1.08
VMP1-206ENST00000587945 TRAV12-1A0A0B4J245 112 aa8.28□□□□□ -1.08
VMP1-206ENST00000587945 CHCHD1Q96BP2 118 aaKnown RBP8.28□□□□□ -1.08
VMP1-206ENST00000587945 NCR3O14931 201 aa8.26□□□□□ -1.09
VMP1-206ENST00000587945 MEIG1Q5JSS6 88 aa8.26□□□□□ -1.09
VMP1-206ENST00000587945 BOD1L2Q8IYS8 172 aa8.26□□□□□ -1.09
VMP1-206ENST00000587945 FAM19A2Q8N3H0 131 aa8.26□□□□□ -1.09
VMP1-206ENST00000587945 IGLV7-46A0A075B6I9 117 aa8.25□□□□□ -1.09
VMP1-206ENST00000587945 MIR7-3HGQ8N6C7 128 aa8.25□□□□□ -1.09
VMP1-206ENST00000587945 SPRR4Q96PI1 79 aa8.25□□□□□ -1.09
VMP1-206ENST00000587945 FAT4Q6V0I7 4981 aa8.23□□□□□ -1.09
VMP1-206ENST00000587945 H0Y8G0 127 aa8.23□□□□□ -1.09
VMP1-206ENST00000587945 HSBP1O75506 76 aa8.23□□□□□ -1.09
VMP1-206ENST00000587945 CDIP1Q9H305 208 aa8.23□□□□□ -1.09
VMP1-206ENST00000587945 NDUFA12Q9UI09 145 aa8.23□□□□□ -1.09
VMP1-206ENST00000587945 A0A0U1RQV1 116 aa8.22□□□□□ -1.09
VMP1-206ENST00000587945 PRYO14603 147 aa8.22□□□□□ -1.09
VMP1-206ENST00000587945 HERV-K104P63124 156 aa8.22□□□□□ -1.09
VMP1-206ENST00000587945 COLCA2A8K830 154 aa8.21□□□□□ -1.1
VMP1-206ENST00000587945 TSPEAR-AS2P59090 65 aa8.21□□□□□ -1.1
VMP1-206ENST00000587945 TPRXLQ17RH7 258 aa8.21□□□□□ -1.1
VMP1-206ENST00000587945 SMCR5Q8TEV8 140 aa8.21□□□□□ -1.1
VMP1-206ENST00000587945 PPDPFQ9H3Y8 114 aa8.21□□□□□ -1.1
VMP1-206ENST00000587945 KCNQ1DNQ9H478 68 aa8.21□□□□□ -1.1
VMP1-206ENST00000587945 TRBV10-3A0A0K0K1G6 114 aa8.2□□□□□ -1.1
VMP1-206ENST00000587945 MYMXA0A1B0GTQ4 84 aa8.2□□□□□ -1.1
VMP1-206ENST00000587945 SPRR1AP35321 89 aa8.2□□□□□ -1.1
VMP1-206ENST00000587945 LINC00337Q8N6G1 96 aa8.2□□□□□ -1.1
VMP1-206ENST00000587945 DAND5Q8N907 189 aa8.2□□□□□ -1.1
VMP1-206ENST00000587945 ZNF706Q9Y5V0 76 aaPredicted RBP8.2□□□□□ -1.1
VMP1-206ENST00000587945 ETDCA0A1B0GVM5 59 aa8.19□□□□□ -1.1
VMP1-206ENST00000587945 KRTAP4-16G5E9R7 235 aaPredicted RBP8.19□□□□□ -1.1
VMP1-206ENST00000587945 TRGC2P03986 189 aa8.19□□□□□ -1.1
VMP1-206ENST00000587945 CTAG1AP78358 180 aa8.19□□□□□ -1.1
VMP1-206ENST00000587945 SPAG11AQ6PDA7 123 aa8.19□□□□□ -1.1
VMP1-206ENST00000587945 LINC00587B1AMM8 73 aa8.18□□□□□ -1.1
VMP1-206ENST00000587945 LINC00310P59036 64 aa8.18□□□□□ -1.1
VMP1-206ENST00000587945 Q8NBF4 154 aa8.18□□□□□ -1.1
VMP1-206ENST00000587945 SERF1AO75920 110 aa8.17□□□□□ -1.1
VMP1-206ENST00000587945 LEPROTL1O95214 131 aa8.17□□□□□ -1.1
VMP1-206ENST00000587945 C4orf48Q5BLP8 95 aa8.17□□□□□ -1.1
VMP1-206ENST00000587945 MAP1LC3CQ9BXW4 147 aa8.17□□□□□ -1.1
VMP1-206ENST00000587945 LEPROTO15243 131 aa8.16□□□□□ -1.1
VMP1-206ENST00000587945 PMCHL2Q9BQD1 86 aa8.16□□□□□ -1.1
VMP1-206ENST00000587945 KRTAP3-3Q9BYR6 98 aa8.16□□□□□ -1.1
VMP1-206ENST00000587945 KRTAP3-2Q9BYR7 98 aa8.16□□□□□ -1.1
VMP1-206ENST00000587945 B5MCH6 92 aa8.15□□□□□ -1.1
VMP1-206ENST00000587945 ERC2-IT1O76042 136 aa8.15□□□□□ -1.1
VMP1-206ENST00000587945 GAGE2AQ6NT46 116 aa8.15□□□□□ -1.1
VMP1-206ENST00000587945 J3QQQ9 107 aa8.14□□□□□ -1.11
VMP1-206ENST00000587945 FABP4P15090 132 aa8.14□□□□□ -1.11
VMP1-206ENST00000587945 LOC107984156A0A0G2JMH3 177 aa8.13□□□□□ -1.11
VMP1-206ENST00000587945 PLNP26678 52 aa8.13□□□□□ -1.11
VMP1-206ENST00000587945 DDTP30046 118 aa8.13□□□□□ -1.11
VMP1-206ENST00000587945 LINC00483Q53H64 154 aa8.13□□□□□ -1.11
VMP1-206ENST00000587945 LCE2AQ5TA79 106 aaPredicted RBP8.13□□□□□ -1.11
VMP1-206ENST00000587945 ARL17AQ8IVW1 177 aa8.13□□□□□ -1.11
VMP1-206ENST00000587945 DPM2O94777 84 aa8.12□□□□□ -1.11
VMP1-206ENST00000587945 S100A12P80511 92 aa8.12□□□□□ -1.11
VMP1-206ENST00000587945 Q9BRP9 147 aa8.12□□□□□ -1.11
VMP1-206ENST00000587945 HSPB8Q9UJY1 196 aa8.12□□□□□ -1.11
VMP1-206ENST00000587945 IGLV9-49A0A0B4J1Y8 123 aa8.11□□□□□ -1.11
VMP1-206ENST00000587945 TRBV10-2A0A0K0K1G8 114 aa8.11□□□□□ -1.11
VMP1-206ENST00000587945 FP248Q71RG6 208 aaPredicted RBP8.11□□□□□ -1.11
VMP1-206ENST00000587945 IGKCP01834 107 aa8.1□□□□□ -1.11
VMP1-206ENST00000587945 LGALS3P17931 250 aaKnown RBP8.1□□□□□ -1.11
VMP1-206ENST00000587945 HERVK_113P61574 105 aa8.1□□□□□ -1.11
VMP1-206ENST00000587945 MOBPQ13875 183 aa8.1□□□□□ -1.11
VMP1-206ENST00000587945 SPANXB1Q9NS25 103 aaPredicted RBP8.1□□□□□ -1.11
VMP1-206ENST00000587945 EIF4EBP3O60516 100 aaPredicted RBP8.09□□□□□ -1.11
VMP1-206ENST00000587945 SPINK1P00995 79 aa8.09□□□□□ -1.11
VMP1-206ENST00000587945 NMUP48645 174 aa8.09□□□□□ -1.11
VMP1-206ENST00000587945 NPC2P61916 151 aa8.09□□□□□ -1.11
VMP1-206ENST00000587945 KRTAP13-3Q3SY46 172 aa8.09□□□□□ -1.11
VMP1-206ENST00000587945 MIEN1Q9BRT3 115 aa8.09□□□□□ -1.11
VMP1-206ENST00000587945 IGLV6-57P01721 117 aa8.08□□□□□ -1.12
VMP1-206ENST00000587945 S100A7L2Q5SY68 101 aa8.08□□□□□ -1.12
VMP1-206ENST00000587945 SOSTDC1Q6X4U4 206 aa8.08□□□□□ -1.12
VMP1-206ENST00000587945 Q6ZRX8 168 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms