RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 CTAG1AP78358 180 aa8.11□□□□□ -1.11
ERCC1-205ENST00000587888 A0A0U1RRA0 63 aa8.1□□□□□ -1.11
ERCC1-205ENST00000587888 C11orf86A6NJI1 115 aa8.1□□□□□ -1.11
ERCC1-205ENST00000587888 LINC00614P0C842 121 aa8.1□□□□□ -1.11
ERCC1-205ENST00000587888 BAGE3Q86Y29 109 aa8.1□□□□□ -1.11
ERCC1-205ENST00000587888 C4orf48Q5BLP8 95 aa8.09□□□□□ -1.11
ERCC1-205ENST00000587888 SPAG11AQ6PDA7 123 aa8.09□□□□□ -1.11
ERCC1-205ENST00000587888 URB1-AS1Q96HZ7 61 aa8.09□□□□□ -1.11
ERCC1-205ENST00000587888 SPRR4Q96PI1 79 aa8.09□□□□□ -1.11
ERCC1-205ENST00000587888 SEC11CQ9BY50 192 aa8.09□□□□□ -1.11
ERCC1-205ENST00000587888 RPS10P5Q9NQ39 176 aa8.08□□□□□ -1.12
ERCC1-205ENST00000587888 HBDP02042 147 aa8.07□□□□□ -1.12
ERCC1-205ENST00000587888 DAND5Q8N907 189 aa8.07□□□□□ -1.12
ERCC1-205ENST00000587888 C18orf32Q8TCD1 76 aa8.07□□□□□ -1.12
ERCC1-205ENST00000587888 TRAPPC1Q9Y5R8 145 aa8.07□□□□□ -1.12
ERCC1-205ENST00000587888 SFTA2Q6UW10 78 aa8.06□□□□□ -1.12
ERCC1-205ENST00000587888 LINC00337Q8N6G1 96 aa8.06□□□□□ -1.12
ERCC1-205ENST00000587888 ATP6V1G1O75348 118 aa8.05□□□□□ -1.12
ERCC1-205ENST00000587888 Q8NBF4 154 aa8.05□□□□□ -1.12
ERCC1-205ENST00000587888 CHTOPQ9Y3Y2 248 aaKnown RBP8.05□□□□□ -1.12
ERCC1-205ENST00000587888 IFITM2Q01629 132 aa8.04□□□□□ -1.12
ERCC1-205ENST00000587888 SMCR5Q8TEV8 140 aa8.04□□□□□ -1.12
ERCC1-205ENST00000587888 ZNF706Q9Y5V0 76 aaPredicted RBP8.04□□□□□ -1.12
ERCC1-205ENST00000587888 KRTAP9-6A0A140TA67 174 aa8.03□□□□□ -1.12
ERCC1-205ENST00000587888 NCR3O14931 201 aa8.03□□□□□ -1.12
ERCC1-205ENST00000587888 SMIM13P0DJ93 91 aa8.03□□□□□ -1.12
ERCC1-205ENST00000587888 FP248Q71RG6 208 aaPredicted RBP8.03□□□□□ -1.12
ERCC1-205ENST00000587888 BOD1L2Q8IYS8 172 aa8.03□□□□□ -1.12
ERCC1-205ENST00000587888 FAT4Q6V0I7 4981 aa8.02□□□□□ -1.13
ERCC1-205ENST00000587888 TMEM223A0PJW6 202 aa8.02□□□□□ -1.13
ERCC1-205ENST00000587888 RHEBQ15382 184 aa8.02□□□□□ -1.13
ERCC1-205ENST00000587888 COMMD7Q86VX2 200 aa8.02□□□□□ -1.13
ERCC1-205ENST00000587888 PRYO14603 147 aa8.01□□□□□ -1.13
ERCC1-205ENST00000587888 MEIG1Q5JSS6 88 aa8.01□□□□□ -1.13
ERCC1-205ENST00000587888 ETDCA0A1B0GVM5 59 aa8□□□□□ -1.13
ERCC1-205ENST00000587888 KRTAP13-3Q3SY46 172 aa8□□□□□ -1.13
ERCC1-205ENST00000587888 C10orf91Q5T1B1 145 aa8□□□□□ -1.13
ERCC1-205ENST00000587888 MIR7-3HGQ8N6C7 128 aa7.99□□□□□ -1.13
ERCC1-205ENST00000587888 KCNQ1DNQ9H478 68 aa7.99□□□□□ -1.13
ERCC1-205ENST00000587888 SPINK1P00995 79 aa7.98□□□□□ -1.13
ERCC1-205ENST00000587888 SPRR1AP35321 89 aa7.98□□□□□ -1.13
ERCC1-205ENST00000587888 GAGE2AQ6NT46 116 aa7.98□□□□□ -1.13
ERCC1-205ENST00000587888 IGLV9-49A0A0B4J1Y8 123 aa7.97□□□□□ -1.13
ERCC1-205ENST00000587888 TRBV10-3A0A0K0K1G6 114 aa7.97□□□□□ -1.13
ERCC1-205ENST00000587888 ASB16-AS1Q495Z4 193 aa7.97□□□□□ -1.13
ERCC1-205ENST00000587888 IFI27L1Q96BM0 104 aa7.97□□□□□ -1.13
ERCC1-205ENST00000587888 TRAV12-1A0A0B4J245 112 aa7.96□□□□□ -1.14
ERCC1-205ENST00000587888 KRTAP4-16G5E9R7 235 aaPredicted RBP7.96□□□□□ -1.14
ERCC1-205ENST00000587888 LINC01547P58512 204 aaPredicted RBP7.95□□□□□ -1.14
ERCC1-205ENST00000587888 HERV-K104P63124 156 aa7.95□□□□□ -1.14
ERCC1-205ENST00000587888 MOBPQ13875 183 aa7.95□□□□□ -1.14
ERCC1-205ENST00000587888 KRTAP4-1Q9BYQ7 146 aa7.95□□□□□ -1.14
ERCC1-205ENST00000587888 MUC17Q685J3 4493 aa7.94□□□□□ -1.14
ERCC1-205ENST00000587888 LINC00587B1AMM8 73 aa7.94□□□□□ -1.14
ERCC1-205ENST00000587888 ERC2-IT1O76042 136 aa7.94□□□□□ -1.14
ERCC1-205ENST00000587888 S100A12P80511 92 aa7.94□□□□□ -1.14
ERCC1-205ENST00000587888 LINC00483Q53H64 154 aa7.94□□□□□ -1.14
ERCC1-205ENST00000587888 NDUFA12Q9UI09 145 aa7.94□□□□□ -1.14
ERCC1-205ENST00000587888 MYMXA0A1B0GTQ4 84 aa7.93□□□□□ -1.14
ERCC1-205ENST00000587888 B5MCH6 92 aa7.93□□□□□ -1.14
ERCC1-205ENST00000587888 SEC61BP60468 96 aaKnown RBP7.93□□□□□ -1.14
ERCC1-205ENST00000587888 CHCHD1Q96BP2 118 aaKnown RBP7.93□□□□□ -1.14
ERCC1-205ENST00000587888 MAP1LC3CQ9BXW4 147 aa7.93□□□□□ -1.14
ERCC1-205ENST00000587888 H0Y8G0 127 aa7.92□□□□□ -1.14
ERCC1-205ENST00000587888 APOC3P02656 99 aa7.92□□□□□ -1.14
ERCC1-205ENST00000587888 SSBP3-AS1Q7Z2R9 100 aa7.92□□□□□ -1.14
ERCC1-205ENST00000587888 DDTP30046 118 aa7.91□□□□□ -1.14
ERCC1-205ENST00000587888 Q8N377 158 aa7.91□□□□□ -1.14
ERCC1-205ENST00000587888 FAM19A2Q8N3H0 131 aa7.91□□□□□ -1.14
ERCC1-205ENST00000587888 Q9BRP9 147 aa7.89□□□□□ -1.15
ERCC1-205ENST00000587888 SLC25A20O43772 301 aa7.88□□□□□ -1.15
ERCC1-205ENST00000587888 SNAPINO95295 136 aa7.88□□□□□ -1.15
ERCC1-205ENST00000587888 TSPEAR-AS2P59090 65 aa7.88□□□□□ -1.15
ERCC1-205ENST00000587888 LEPROTO15243 131 aa7.87□□□□□ -1.15
ERCC1-205ENST00000587888 HSBP1O75506 76 aa7.87□□□□□ -1.15
ERCC1-205ENST00000587888 S100A7L2Q5SY68 101 aa7.87□□□□□ -1.15
ERCC1-205ENST00000587888 LOC107984156A0A0G2JMH3 177 aa7.86□□□□□ -1.15
ERCC1-205ENST00000587888 TRBV10-2A0A0K0K1G8 114 aa7.86□□□□□ -1.15
ERCC1-205ENST00000587888 RPS29P62273 56 aaKnown RBP7.86□□□□□ -1.15
ERCC1-205ENST00000587888 C9orf153Q5TBE3 101 aa7.86□□□□□ -1.15
ERCC1-205ENST00000587888 Q6ZRX8 168 aa7.86□□□□□ -1.15
ERCC1-205ENST00000587888 ARL17AQ8IVW1 177 aa7.86□□□□□ -1.15
ERCC1-205ENST00000587888 SVBPQ8N300 66 aa7.86□□□□□ -1.15
ERCC1-205ENST00000587888 NDUFA5Q16718 116 aa7.85□□□□□ -1.15
ERCC1-205ENST00000587888 MIEN1Q9BRT3 115 aa7.85□□□□□ -1.15
ERCC1-205ENST00000587888 J3QQQ9 107 aa7.84□□□□□ -1.15
ERCC1-205ENST00000587888 YPEL4Q96NS1 127 aa7.84□□□□□ -1.15
ERCC1-205ENST00000587888 SPANXB1Q9NS25 103 aaPredicted RBP7.84□□□□□ -1.15
ERCC1-205ENST00000587888 JOSD1Q15040 202 aaPredicted RBP7.83□□□□□ -1.16
ERCC1-205ENST00000587888 XP32Q5T750 250 aa7.83□□□□□ -1.16
ERCC1-205ENST00000587888 ST20-AS1Q8NBB2 130 aa7.83□□□□□ -1.16
ERCC1-205ENST00000587888 TRAV23DV6A0A075B6W5 121 aa7.82□□□□□ -1.16
ERCC1-205ENST00000587888 LEPROTL1O95214 131 aa7.82□□□□□ -1.16
ERCC1-205ENST00000587888 IGLV6-57P01721 117 aa7.82□□□□□ -1.16
ERCC1-205ENST00000587888 LGALS3P17931 250 aaKnown RBP7.82□□□□□ -1.16
ERCC1-205ENST00000587888 NPC2P61916 151 aa7.82□□□□□ -1.16
ERCC1-205ENST00000587888 LCE2DQ5TA82 110 aaPredicted RBP7.82□□□□□ -1.16
ERCC1-205ENST00000587888 NDUFC2O95298 119 aa7.81□□□□□ -1.16
ERCC1-205ENST00000587888 PLNP26678 52 aa7.81□□□□□ -1.16
ERCC1-205ENST00000587888 PMCHL2Q9BQD1 86 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms