RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 RPL24P83731 157 aaKnown RBP8.24□□□□□ -1.09
SDF2-202ENST00000585428 TRAV9-1A0A075B6T8 112 aa8.23□□□□□ -1.09
SDF2-202ENST00000585428 IGLC3P0DOY3 106 aa8.23□□□□□ -1.09
SDF2-202ENST00000585428 CBLN2Q8IUK8 224 aa8.23□□□□□ -1.09
SDF2-202ENST00000585428 ERG28Q9UKR5 140 aa8.23□□□□□ -1.09
SDF2-202ENST00000585428 RAB14P61106 215 aa8.22□□□□□ -1.09
SDF2-202ENST00000585428 FP248Q71RG6 208 aaPredicted RBP8.21□□□□□ -1.1
SDF2-202ENST00000585428 ZNF22P17026 224 aaPredicted RBP8.2□□□□□ -1.1
SDF2-202ENST00000585428 SPRR4Q96PI1 79 aa8.2□□□□□ -1.1
SDF2-202ENST00000585428 KRTAP13-3Q3SY46 172 aa8.19□□□□□ -1.1
SDF2-202ENST00000585428 ASB16-AS1Q495Z4 193 aa8.19□□□□□ -1.1
SDF2-202ENST00000585428 ZNF625Q96I27 306 aaPredicted RBP8.19□□□□□ -1.1
SDF2-202ENST00000585428 HIGD2AQ9BW72 106 aa8.19□□□□□ -1.1
SDF2-202ENST00000585428 A0A096LNJ9 63 aa8.18□□□□□ -1.1
SDF2-202ENST00000585428 FA2HQ7L5A8 372 aa8.18□□□□□ -1.1
SDF2-202ENST00000585428 XP32Q5T750 250 aa8.17□□□□□ -1.1
SDF2-202ENST00000585428 LINC00337Q8N6G1 96 aa8.17□□□□□ -1.1
SDF2-202ENST00000585428 KRTAP4-1Q9BYQ7 146 aa8.17□□□□□ -1.1
SDF2-202ENST00000585428 NDUFA6P56556 154 aa8.16□□□□□ -1.1
SDF2-202ENST00000585428 SMCO4Q9NRQ5 59 aa8.16□□□□□ -1.1
SDF2-202ENST00000585428 TMEM218A2RU14 115 aa8.15□□□□□ -1.1
SDF2-202ENST00000585428 COX19Q49B96 90 aa8.15□□□□□ -1.1
SDF2-202ENST00000585428 SFTA2Q6UW10 78 aa8.15□□□□□ -1.1
SDF2-202ENST00000585428 SPINK1P00995 79 aa8.14□□□□□ -1.11
SDF2-202ENST00000585428 FABP9Q0Z7S8 132 aa8.14□□□□□ -1.11
SDF2-202ENST00000585428 C21orf62-AS1Q17RA5 79 aa8.14□□□□□ -1.11
SDF2-202ENST00000585428 DAND5Q8N907 189 aa8.14□□□□□ -1.11
SDF2-202ENST00000585428 Q8NBF4 154 aa8.14□□□□□ -1.11
SDF2-202ENST00000585428 URB1-AS1Q96HZ7 61 aa8.14□□□□□ -1.11
SDF2-202ENST00000585428 C11orf86A6NJI1 115 aa8.13□□□□□ -1.11
SDF2-202ENST00000585428 LINC00614P0C842 121 aa8.13□□□□□ -1.11
SDF2-202ENST00000585428 S100PP25815 95 aa8.13□□□□□ -1.11
SDF2-202ENST00000585428 LINC00158P58513 81 aa8.13□□□□□ -1.11
SDF2-202ENST00000585428 CLLU1Q5K131 121 aa8.13□□□□□ -1.11
SDF2-202ENST00000585428 ZNF706Q9Y5V0 76 aaPredicted RBP8.13□□□□□ -1.11
SDF2-202ENST00000585428 KRTAP4-16G5E9R7 235 aaPredicted RBP8.12□□□□□ -1.11
SDF2-202ENST00000585428 SPRR1AP35321 89 aa8.12□□□□□ -1.11
SDF2-202ENST00000585428 LINC01547P58512 204 aaPredicted RBP8.12□□□□□ -1.11
SDF2-202ENST00000585428 UQCC3Q6UW78 93 aa8.12□□□□□ -1.11
SDF2-202ENST00000585428 SMCR5Q8TEV8 140 aa8.12□□□□□ -1.11
SDF2-202ENST00000585428 TMEM170BQ5T4T1 132 aa8.11□□□□□ -1.11
SDF2-202ENST00000585428 BAGE3Q86Y29 109 aa8.11□□□□□ -1.11
SDF2-202ENST00000585428 KCNQ1DNQ9H478 68 aa8.11□□□□□ -1.11
SDF2-202ENST00000585428 SEC61BP60468 96 aaKnown RBP8.1□□□□□ -1.11
SDF2-202ENST00000585428 PRYO14603 147 aa8.09□□□□□ -1.11
SDF2-202ENST00000585428 HBDP02042 147 aa8.09□□□□□ -1.11
SDF2-202ENST00000585428 PMCHL1Q16048 86 aa8.09□□□□□ -1.11
SDF2-202ENST00000585428 LINC00483Q53H64 154 aa8.09□□□□□ -1.11
SDF2-202ENST00000585428 C18orf32Q8TCD1 76 aa8.09□□□□□ -1.11
SDF2-202ENST00000585428 SEC11CQ9BY50 192 aa8.09□□□□□ -1.11
SDF2-202ENST00000585428 A0A0U1RRA0 63 aa8.08□□□□□ -1.12
SDF2-202ENST00000585428 TMEM223A0PJW6 202 aa8.07□□□□□ -1.12
SDF2-202ENST00000585428 SMIM13P0DJ93 91 aa8.06□□□□□ -1.12
SDF2-202ENST00000585428 RPS29P62273 56 aaKnown RBP8.06□□□□□ -1.12
SDF2-202ENST00000585428 SSBP3-AS1Q7Z2R9 100 aa8.06□□□□□ -1.12
SDF2-202ENST00000585428 BOD1L2Q8IYS8 172 aa8.06□□□□□ -1.12
SDF2-202ENST00000585428 Q8N377 158 aa8.06□□□□□ -1.12
SDF2-202ENST00000585428 CHTOPQ9Y3Y2 248 aaKnown RBP8.06□□□□□ -1.12
SDF2-202ENST00000585428 FSIP2Q5CZC0 6907 aa8.05□□□□□ -1.12
SDF2-202ENST00000585428 NCR3O14931 201 aa8.04□□□□□ -1.12
SDF2-202ENST00000585428 C10orf91Q5T1B1 145 aa8.04□□□□□ -1.12
SDF2-202ENST00000585428 CRCT1Q9UGL9 99 aa8.04□□□□□ -1.12
SDF2-202ENST00000585428 TRAPPC1Q9Y5R8 145 aa8.04□□□□□ -1.12
SDF2-202ENST00000585428 TRBV10-3A0A0K0K1G6 114 aa8.03□□□□□ -1.12
SDF2-202ENST00000585428 ETDCA0A1B0GVM5 59 aa8.03□□□□□ -1.12
SDF2-202ENST00000585428 B5MCH6 92 aa8.03□□□□□ -1.12
SDF2-202ENST00000585428 ATP6V1G1O75348 118 aa8.03□□□□□ -1.12
SDF2-202ENST00000585428 ERC2-IT1O76042 136 aa8.03□□□□□ -1.12
SDF2-202ENST00000585428 GAGE2AQ6NT46 116 aa8.03□□□□□ -1.12
SDF2-202ENST00000585428 MIR7-3HGQ8N6C7 128 aa8.03□□□□□ -1.12
SDF2-202ENST00000585428 TRAV12-1A0A0B4J245 112 aa8.02□□□□□ -1.13
SDF2-202ENST00000585428 RPS10P5Q9NQ39 176 aa8.02□□□□□ -1.13
SDF2-202ENST00000585428 SLC25A20O43772 301 aa8.01□□□□□ -1.13
SDF2-202ENST00000585428 HERV-K104P63124 156 aa8.01□□□□□ -1.13
SDF2-202ENST00000585428 IFITM2Q01629 132 aa8.01□□□□□ -1.13
SDF2-202ENST00000585428 MOBPQ13875 183 aa8.01□□□□□ -1.13
SDF2-202ENST00000585428 NDUFA12Q9UI09 145 aa8.01□□□□□ -1.13
SDF2-202ENST00000585428 IGLV9-49A0A0B4J1Y8 123 aa8□□□□□ -1.13
SDF2-202ENST00000585428 LOC107984156A0A0G2JMH3 177 aa8□□□□□ -1.13
SDF2-202ENST00000585428 LINC00587B1AMM8 73 aa8□□□□□ -1.13
SDF2-202ENST00000585428 RHEBQ15382 184 aa8□□□□□ -1.13
SDF2-202ENST00000585428 ARL17AQ8IVW1 177 aa8□□□□□ -1.13
SDF2-202ENST00000585428 FAM19A2Q8N3H0 131 aa8□□□□□ -1.13
SDF2-202ENST00000585428 Q9BRP9 147 aa8□□□□□ -1.13
SDF2-202ENST00000585428 MEIG1Q5JSS6 88 aa7.99□□□□□ -1.13
SDF2-202ENST00000585428 KRTAP4-8Q9BYQ9 185 aa7.99□□□□□ -1.13
SDF2-202ENST00000585428 KRTAP19-2Q3LHN2 52 aa7.98□□□□□ -1.13
SDF2-202ENST00000585428 IFI27L1Q96BM0 104 aa7.98□□□□□ -1.13
SDF2-202ENST00000585428 TRBV10-2A0A0K0K1G8 114 aa7.96□□□□□ -1.14
SDF2-202ENST00000585428 MYMXA0A1B0GTQ4 84 aa7.96□□□□□ -1.14
SDF2-202ENST00000585428 S100A12P80511 92 aa7.96□□□□□ -1.14
SDF2-202ENST00000585428 MAP1LC3CQ9BXW4 147 aa7.96□□□□□ -1.14
SDF2-202ENST00000585428 DDTP30046 118 aa7.95□□□□□ -1.14
SDF2-202ENST00000585428 Q6ZRX8 168 aa7.95□□□□□ -1.14
SDF2-202ENST00000585428 CHCHD1Q96BP2 118 aaKnown RBP7.95□□□□□ -1.14
SDF2-202ENST00000585428 COMMD7Q86VX2 200 aa7.93□□□□□ -1.14
SDF2-202ENST00000585428 IGLV6-57P01721 117 aa7.92□□□□□ -1.14
SDF2-202ENST00000585428 MT1HP80294 61 aa7.92□□□□□ -1.14
SDF2-202ENST00000585428 TSPEAR-AS2P59090 65 aa7.91□□□□□ -1.14
SDF2-202ENST00000585428 NDUFC2O95298 119 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms