RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 Q1RN00 199 aa6.91□□□□□ -1.3
LIG3-203ENST00000585370 SND1-IT1Q9HBX3 110 aa6.91□□□□□ -1.3
LIG3-203ENST00000585370 PCLOQ9Y6V0 5065 aa6.9□□□□□ -1.3
LIG3-203ENST00000585370 DYNC1H1Q14204 4646 aaKnown RBP6.9□□□□□ -1.3
LIG3-203ENST00000585370 EIF4EBP3O60516 100 aaPredicted RBP6.9□□□□□ -1.3
LIG3-203ENST00000585370 NDUFC2O95298 119 aa6.9□□□□□ -1.3
LIG3-203ENST00000585370 UNQ6190/PRO20217Q6UXQ8 127 aa6.9□□□□□ -1.3
LIG3-203ENST00000585370 CAMK2N2Q96S95 79 aa6.9□□□□□ -1.3
LIG3-203ENST00000585370 PKD1P98161 4303 aa6.9□□□□□ -1.31
LIG3-203ENST00000585370 RPL13AP40429 203 aaKnown RBP6.89□□□□□ -1.31
LIG3-203ENST00000585370 RNF151Q2KHN1 245 aa6.89□□□□□ -1.31
LIG3-203ENST00000585370 Q9HAA7 133 aa6.89□□□□□ -1.31
LIG3-203ENST00000585370 DNAH11Q96DT5 4516 aa6.89□□□□□ -1.31
LIG3-203ENST00000585370 TTC32Q5I0X7 151 aa6.88□□□□□ -1.31
LIG3-203ENST00000585370 C6orf223Q8N319 242 aa6.88□□□□□ -1.31
LIG3-203ENST00000585370 C15orf56Q8N910 161 aa6.88□□□□□ -1.31
LIG3-203ENST00000585370 F8W1H4 67 aa6.87□□□□□ -1.31
LIG3-203ENST00000585370 H7C2G1 150 aa6.87□□□□□ -1.31
LIG3-203ENST00000585370 C10orf25Q5T742 122 aa6.87□□□□□ -1.31
LIG3-203ENST00000585370 SYCNQ0VAF6 134 aa6.86□□□□□ -1.31
LIG3-203ENST00000585370 HIGD2BQ4VC39 106 aa6.86□□□□□ -1.31
LIG3-203ENST00000585370 C6orf48Q9UBA6 75 aa6.86□□□□□ -1.31
LIG3-203ENST00000585370 ATXN8Q156A1 80 aa6.85□□□□□ -1.31
LIG3-203ENST00000585370 C9orf116Q5BN46 136 aaPredicted RBP6.85□□□□□ -1.31
LIG3-203ENST00000585370 LINC00526Q96FQ7 95 aa6.85□□□□□ -1.31
LIG3-203ENST00000585370 IGKV2-28A0A075B6P5 120 aa6.84□□□□□ -1.31
LIG3-203ENST00000585370 TRBV10-2A0A0K0K1G8 114 aa6.84□□□□□ -1.31
LIG3-203ENST00000585370 USP17L23D6RBM5 183 aa6.84□□□□□ -1.31
LIG3-203ENST00000585370 NDUFC2-KCTD14E9PQ53 114 aa6.84□□□□□ -1.31
LIG3-203ENST00000585370 H3BMG7 143 aa6.84□□□□□ -1.31
LIG3-203ENST00000585370 TRIAP1O43715 76 aa6.84□□□□□ -1.31
LIG3-203ENST00000585370 IGKV2D-28P01615 120 aa6.84□□□□□ -1.31
LIG3-203ENST00000585370 RPL28P46779 137 aaKnown RBP6.84□□□□□ -1.31
LIG3-203ENST00000585370 C14orf177Q52M58 125 aa6.84□□□□□ -1.31
LIG3-203ENST00000585370 Q6ZRU5 148 aa6.84□□□□□ -1.31
LIG3-203ENST00000585370 H0YGX0 51 aa6.83□□□□□ -1.32
LIG3-203ENST00000585370 TCL1BO95988 128 aa6.83□□□□□ -1.32
LIG3-203ENST00000585370 TLX1NBP0CAT3 122 aa6.83□□□□□ -1.32
LIG3-203ENST00000585370 LINC00337Q8N6G1 96 aa6.83□□□□□ -1.32
LIG3-203ENST00000585370 TMEM126AQ9H061 195 aa6.83□□□□□ -1.32
LIG3-203ENST00000585370 NBDYA0A0U1RRE5 68 aa6.82□□□□□ -1.32
LIG3-203ENST00000585370 A0A1B0GVY2 172 aa6.82□□□□□ -1.32
LIG3-203ENST00000585370 OR13C6PQ8NH95 151 aa6.82□□□□□ -1.32
LIG3-203ENST00000585370 CARD19Q96LW7 228 aa6.82□□□□□ -1.32
LIG3-203ENST00000585370 CBY1Q9Y3M2 126 aa6.82□□□□□ -1.32
LIG3-203ENST00000585370 M0QXV9 152 aa6.81□□□□□ -1.32
LIG3-203ENST00000585370 PSCAO43653 123 aa6.81□□□□□ -1.32
LIG3-203ENST00000585370 LINC00336Q6ZUF6 198 aa6.81□□□□□ -1.32
LIG3-203ENST00000585370 RTL8CO15255 209 aa6.8□□□□□ -1.32
LIG3-203ENST00000585370 M0R2N4 97 aa6.79□□□□□ -1.32
LIG3-203ENST00000585370 LST1O00453 97 aa6.79□□□□□ -1.32
LIG3-203ENST00000585370 LINC01620Q4KN68 170 aa6.79□□□□□ -1.32
LIG3-203ENST00000585370 S100A7L2Q5SY68 101 aa6.79□□□□□ -1.32
LIG3-203ENST00000585370 SMIM11BQ8TCY0 68 aa6.79□□□□□ -1.32
LIG3-203ENST00000585370 LINC01600Q96MT4 127 aa6.79□□□□□ -1.32
LIG3-203ENST00000585370 PRO0461Q9UI25 63 aa6.79□□□□□ -1.32
LIG3-203ENST00000585370 PKIGQ9Y2B9 76 aa6.79□□□□□ -1.32
LIG3-203ENST00000585370 ABCA13Q86UQ4 5058 aa6.79□□□□□ -1.32
LIG3-203ENST00000585370 HSPG2P98160 4391 aa6.79□□□□□ -1.32
LIG3-203ENST00000585370 LRP1BQ9NZR2 4599 aa6.78□□□□□ -1.32
LIG3-203ENST00000585370 SNCGO76070 127 aa6.78□□□□□ -1.32
LIG3-203ENST00000585370 TRACP01848 142 aa6.78□□□□□ -1.32
LIG3-203ENST00000585370 KRTAP1-5Q9BYS1 174 aa6.78□□□□□ -1.32
LIG3-203ENST00000585370 PLA2G2DQ9UNK4 145 aa6.78□□□□□ -1.32
LIG3-203ENST00000585370 LOC107984640A0A0U1RRK4 108 aa6.77□□□□□ -1.33
LIG3-203ENST00000585370 A0A1B0GX51 115 aa6.77□□□□□ -1.33
LIG3-203ENST00000585370 M0R378 163 aa6.77□□□□□ -1.33
LIG3-203ENST00000585370 CNBPP62633 177 aaKnown RBP6.77□□□□□ -1.33
LIG3-203ENST00000585370 WFDC2Q14508 124 aa6.77□□□□□ -1.33
LIG3-203ENST00000585370 C9JAW5 83 aa6.76□□□□□ -1.33
LIG3-203ENST00000585370 H3BT86 120 aa6.76□□□□□ -1.33
LIG3-203ENST00000585370 SLC25A20O43772 301 aa6.76□□□□□ -1.33
LIG3-203ENST00000585370 SLPIP03973 132 aa6.76□□□□□ -1.33
LIG3-203ENST00000585370 Q6ZRP5 223 aa6.76□□□□□ -1.33
LIG3-203ENST00000585370 XAGE1AQ9HD64 81 aa6.76□□□□□ -1.33
LIG3-203ENST00000585370 NCR3O14931 201 aa6.75□□□□□ -1.33
LIG3-203ENST00000585370 IGLV6-57P01721 117 aa6.75□□□□□ -1.33
LIG3-203ENST00000585370 VPREB1P12018 145 aa6.75□□□□□ -1.33
LIG3-203ENST00000585370 PRR3P79522 188 aaKnown RBP6.75□□□□□ -1.33
LIG3-203ENST00000585370 GAGE2EQ4V326 116 aa6.75□□□□□ -1.33
LIG3-203ENST00000585370 Q6ZR54 194 aa6.75□□□□□ -1.33
LIG3-203ENST00000585370 ANKRD29Q8N6D5 301 aa6.75□□□□□ -1.33
LIG3-203ENST00000585370 CLEC2BQ92478 149 aa6.75□□□□□ -1.33
LIG3-203ENST00000585370 GAGE2DQ9UEU5 116 aa6.75□□□□□ -1.33
LIG3-203ENST00000585370 J3QR89 54 aa6.74□□□□□ -1.33
LIG3-203ENST00000585370 K7ERU9 68 aa6.74□□□□□ -1.33
LIG3-203ENST00000585370 RPL18AQ02543 176 aaKnown RBP6.74□□□□□ -1.33
LIG3-203ENST00000585370 IGLV5-37A0A075B6J1 123 aa6.73□□□□□ -1.33
LIG3-203ENST00000585370 TRBV7-6A0A0J9YX20 115 aa6.73□□□□□ -1.33
LIG3-203ENST00000585370 SMCPP49901 116 aaPredicted RBP6.73□□□□□ -1.33
LIG3-203ENST00000585370 OCIAD2Q56VL3 154 aa6.73□□□□□ -1.33
LIG3-203ENST00000585370 Q8NDZ9 215 aa6.73□□□□□ -1.33
LIG3-203ENST00000585370 DNAH5Q8TE73 4624 aa6.73□□□□□ -1.33
LIG3-203ENST00000585370 LECT2O14960 151 aa6.72□□□□□ -1.33
LIG3-203ENST00000585370 DNAL4O96015 105 aa6.72□□□□□ -1.33
LIG3-203ENST00000585370 ETDBQ3ZM63 59 aa6.72□□□□□ -1.33
LIG3-203ENST00000585370 C9orf129Q5T035 196 aaKnown RBP6.72□□□□□ -1.33
LIG3-203ENST00000585370 Q6ZRN7 208 aaPredicted RBP6.72□□□□□ -1.33
LIG3-203ENST00000585370 TEN1Q86WV5 123 aa6.72□□□□□ -1.33
LIG3-203ENST00000585370 NKAPP1Q8N9T2 125 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms