RNA–Protein interactions for RNA: ENST00000584939.1

ITGB4-213, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-213ENST00000584939 LINC00167Q96N53 147 aa10.28□□□□□ -0.76
ITGB4-213ENST00000584939 IGLV5-37A0A075B6J1 123 aa10.27□□□□□ -0.77
ITGB4-213ENST00000584939 RPL37AP8A6NKH3 93 aa10.27□□□□□ -0.77
ITGB4-213ENST00000584939 ATP6V1G1O75348 118 aa10.27□□□□□ -0.77
ITGB4-213ENST00000584939 Q8NDZ9 215 aa10.27□□□□□ -0.77
ITGB4-213ENST00000584939 SND1-IT1Q9HBX3 110 aa10.26□□□□□ -0.77
ITGB4-213ENST00000584939 LRP2P98164 4655 aa10.26□□□□□ -0.77
ITGB4-213ENST00000584939 GAGE10A6NGK3 116 aa10.25□□□□□ -0.77
ITGB4-213ENST00000584939 BCE1O60756 84 aa10.25□□□□□ -0.77
ITGB4-213ENST00000584939 COX17Q14061 63 aa10.25□□□□□ -0.77
ITGB4-213ENST00000584939 DPM2O94777 84 aa10.24□□□□□ -0.77
ITGB4-213ENST00000584939 S100A1P23297 94 aa10.24□□□□□ -0.77
ITGB4-213ENST00000584939 PLNP26678 52 aa10.24□□□□□ -0.77
ITGB4-213ENST00000584939 RPL13AP40429 203 aaKnown RBP10.24□□□□□ -0.77
ITGB4-213ENST00000584939 RPL28P46779 137 aaKnown RBP10.24□□□□□ -0.77
ITGB4-213ENST00000584939 SFTA2Q6UW10 78 aa10.24□□□□□ -0.77
ITGB4-213ENST00000584939 NKAPP1Q8N9T2 125 aa10.24□□□□□ -0.77
ITGB4-213ENST00000584939 SYS1-DBNDD2H3BUS1 97 aa10.23□□□□□ -0.77
ITGB4-213ENST00000584939 VPREB1P12018 145 aa10.23□□□□□ -0.77
ITGB4-213ENST00000584939 MAP1LC3CQ9BXW4 147 aa10.23□□□□□ -0.77
ITGB4-213ENST00000584939 IGKCP01834 107 aa10.22□□□□□ -0.77
ITGB4-213ENST00000584939 LEPROTO15243 131 aa10.21□□□□□ -0.77
ITGB4-213ENST00000584939 NDUFA12Q9UI09 145 aa10.21□□□□□ -0.77
ITGB4-213ENST00000584939 SMIM13P0DJ93 91 aa10.2□□□□□ -0.78
ITGB4-213ENST00000584939 LINC01545Q5VT33 79 aa10.2□□□□□ -0.78
ITGB4-213ENST00000584939 A0A0U1RRA0 63 aa10.19□□□□□ -0.78
ITGB4-213ENST00000584939 C3orf79P0CE67 100 aa10.19□□□□□ -0.78
ITGB4-213ENST00000584939 J3QQQ9 107 aa10.18□□□□□ -0.78
ITGB4-213ENST00000584939 LINC00158P58513 81 aa10.18□□□□□ -0.78
ITGB4-213ENST00000584939 HERV-K104P63124 156 aa10.18□□□□□ -0.78
ITGB4-213ENST00000584939 PLEKHB2Q96CS7 222 aa10.18□□□□□ -0.78
ITGB4-213ENST00000584939 IGKV2-28A0A075B6P5 120 aa10.17□□□□□ -0.78
ITGB4-213ENST00000584939 IGKV2D-28P01615 120 aa10.17□□□□□ -0.78
ITGB4-213ENST00000584939 UBE2AP49459 152 aa10.17□□□□□ -0.78
ITGB4-213ENST00000584939 PET117Q6UWS5 81 aa10.17□□□□□ -0.78
ITGB4-213ENST00000584939 MYMXA0A1B0GTQ4 84 aa10.16□□□□□ -0.78
ITGB4-213ENST00000584939 E9PLD3 99 aa10.15□□□□□ -0.78
ITGB4-213ENST00000584939 RPL24P83731 157 aaKnown RBP10.15□□□□□ -0.78
ITGB4-213ENST00000584939 KRTAP13-1Q8IUC0 172 aa10.15□□□□□ -0.78
ITGB4-213ENST00000584939 MIR7-3HGQ8N6C7 128 aa10.15□□□□□ -0.78
ITGB4-213ENST00000584939 A0A087X002 238 aa10.14□□□□□ -0.79
ITGB4-213ENST00000584939 CRYGAP11844 174 aa10.13□□□□□ -0.79
ITGB4-213ENST00000584939 HERVK_113P61574 105 aa10.13□□□□□ -0.79
ITGB4-213ENST00000584939 MEIG1Q5JSS6 88 aa10.13□□□□□ -0.79
ITGB4-213ENST00000584939 ANAPC11Q9NYG5 84 aa10.13□□□□□ -0.79
ITGB4-213ENST00000584939 NMUP48645 174 aa10.12□□□□□ -0.79
ITGB4-213ENST00000584939 RNF213Q63HN8 5207 aa10.11□□□□□ -0.79
ITGB4-213ENST00000584939 IGKV2D-26A0A0A0MRZ7 120 aa10.11□□□□□ -0.79
ITGB4-213ENST00000584939 LOC107984156A0A0G2JMH3 177 aa10.11□□□□□ -0.79
ITGB4-213ENST00000584939 TMEM238C9JI98 176 aa10.11□□□□□ -0.79
ITGB4-213ENST00000584939 PRR4Q16378 134 aa10.11□□□□□ -0.79
ITGB4-213ENST00000584939 ARL17AQ8IVW1 177 aa10.11□□□□□ -0.79
ITGB4-213ENST00000584939 DAND5Q8N907 189 aa10.11□□□□□ -0.79
ITGB4-213ENST00000584939 TYMSOSQ8TAI1 123 aa10.11□□□□□ -0.79
ITGB4-213ENST00000584939 TMEM126AQ9H061 195 aa10.11□□□□□ -0.79
ITGB4-213ENST00000584939 TSPAN13O95857 204 aa10.1□□□□□ -0.79
ITGB4-213ENST00000584939 LGALS3P17931 250 aaKnown RBP10.1□□□□□ -0.79
ITGB4-213ENST00000584939 KRTDAPP60985 99 aa10.1□□□□□ -0.79
ITGB4-213ENST00000584939 PRLHP81277 87 aa10.1□□□□□ -0.79
ITGB4-213ENST00000584939 FAM19A1Q7Z5A9 133 aa10.1□□□□□ -0.79
ITGB4-213ENST00000584939 LINC00587B1AMM8 73 aa10.09□□□□□ -0.79
ITGB4-213ENST00000584939 EIF4EBP3O60516 100 aaPredicted RBP10.09□□□□□ -0.79
ITGB4-213ENST00000584939 HIST3H2BBQ8N257 126 aa10.09□□□□□ -0.79
ITGB4-213ENST00000584939 A0A0J9YXY3 114 aa10.08□□□□□ -0.8
ITGB4-213ENST00000584939 M0R378 163 aa10.08□□□□□ -0.8
ITGB4-213ENST00000584939 ADAMTSL4-AS1Q5T5F5 129 aa10.08□□□□□ -0.8
ITGB4-213ENST00000584939 BOD1L2Q8IYS8 172 aa10.08□□□□□ -0.8
ITGB4-213ENST00000584939 TTTY13Q9BZ97 58 aa10.08□□□□□ -0.8
ITGB4-213ENST00000584939 SOSTDC1Q6X4U4 206 aa10.07□□□□□ -0.8
ITGB4-213ENST00000584939 LITAFQ99732 161 aa10.07□□□□□ -0.8
ITGB4-213ENST00000584939 FAM229BQ4G0N7 80 aa10.06□□□□□ -0.8
ITGB4-213ENST00000584939 KRTAP13-2Q52LG2 175 aa10.06□□□□□ -0.8
ITGB4-213ENST00000584939 HIST1H2BLQ99880 126 aa10.06□□□□□ -0.8
ITGB4-213ENST00000584939 LPAP08519 4548 aa10.05□□□□□ -0.8
ITGB4-213ENST00000584939 NCR3O14931 201 aa10.04□□□□□ -0.8
ITGB4-213ENST00000584939 ANKRD39Q53RE8 183 aa10.04□□□□□ -0.8
ITGB4-213ENST00000584939 ATOH7Q8N100 152 aa10.03□□□□□ -0.8
ITGB4-213ENST00000584939 SPRR1AP35321 89 aa10.01□□□□□ -0.81
ITGB4-213ENST00000584939 TRBV10-3A0A0K0K1G6 114 aa10□□□□□ -0.81
ITGB4-213ENST00000584939 KRTAP4-16G5E9R7 235 aaPredicted RBP10□□□□□ -0.81
ITGB4-213ENST00000584939 HIGD2AQ9BW72 106 aa10□□□□□ -0.81
ITGB4-213ENST00000584939 KCNQ1DNQ9H478 68 aa10□□□□□ -0.81
ITGB4-213ENST00000584939 C20orf202A1L168 122 aa9.99□□□□□ -0.81
ITGB4-213ENST00000584939 ZNF815PA8K554 130 aa9.99□□□□□ -0.81
ITGB4-213ENST00000584939 TIMM17BO60830 172 aa9.99□□□□□ -0.81
ITGB4-213ENST00000584939 NDUFC2O95298 119 aa9.99□□□□□ -0.81
ITGB4-213ENST00000584939 LINC00304Q8N9R0 145 aa9.99□□□□□ -0.81
ITGB4-213ENST00000584939 TRBV10-2A0A0K0K1G8 114 aa9.98□□□□□ -0.81
ITGB4-213ENST00000584939 NPC2P61916 151 aa9.98□□□□□ -0.81
ITGB4-213ENST00000584939 SNRPEP62304 92 aaKnown RBP9.98□□□□□ -0.81
ITGB4-213ENST00000584939 C5orf52A6NGY3 159 aa9.97□□□□□ -0.81
ITGB4-213ENST00000584939 PRYO14603 147 aa9.97□□□□□ -0.81
ITGB4-213ENST00000584939 LINC00308Q8TCZ7 52 aa9.96□□□□□ -0.82
ITGB4-213ENST00000584939 SPANXB1Q9NS25 103 aaPredicted RBP9.96□□□□□ -0.82
ITGB4-213ENST00000584939 IGLV6-57P01721 117 aa9.95□□□□□ -0.82
ITGB4-213ENST00000584939 S100A6P06703 90 aa9.95□□□□□ -0.82
ITGB4-213ENST00000584939 S100A2P29034 98 aa9.95□□□□□ -0.82
ITGB4-213ENST00000584939 PCP2Q8IVA1 136 aa9.95□□□□□ -0.82
ITGB4-213ENST00000584939 LINC00337Q8N6G1 96 aa9.95□□□□□ -0.82
ITGB4-213ENST00000584939 C3orf22Q8N5N4 141 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 142.1 ms