RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 FABP2P12104 132 aa1.24□□□□□ -2.21
VAPA-208ENST00000584796 HRES1P13985 223 aa1.24□□□□□ -2.21
VAPA-208ENST00000584796 HIST1H1DP16402 221 aaKnown RBP1.24□□□□□ -2.21
VAPA-208ENST00000584796 PRCDQ00LT1 54 aa1.24□□□□□ -2.21
VAPA-208ENST00000584796 KRTAP13-2Q52LG2 175 aa1.24□□□□□ -2.21
VAPA-208ENST00000584796 LINC00305Q7Z4B0 112 aa1.24□□□□□ -2.21
VAPA-208ENST00000584796 CMTM2Q8TAZ6 248 aa1.24□□□□□ -2.21
VAPA-208ENST00000584796 TMEM263Q8WUH6 116 aaKnown RBP1.24□□□□□ -2.21
VAPA-208ENST00000584796 TIMM8BQ9Y5J9 83 aaPredicted RBP1.24□□□□□ -2.21
VAPA-208ENST00000584796 TRAV13-1A0A0B4J241 112 aa1.23□□□□□ -2.21
VAPA-208ENST00000584796 TRAV12-3A0A0B4J271 114 aa1.23□□□□□ -2.21
VAPA-208ENST00000584796 A8MWV9 139 aa1.23□□□□□ -2.21
VAPA-208ENST00000584796 G3V3Q6 166 aa1.23□□□□□ -2.21
VAPA-208ENST00000584796 H3BMG7 143 aa1.23□□□□□ -2.21
VAPA-208ENST00000584796 J3QR89 54 aa1.23□□□□□ -2.21
VAPA-208ENST00000584796 CORTO00230 105 aa1.23□□□□□ -2.21
VAPA-208ENST00000584796 SPINK4O60575 86 aa1.23□□□□□ -2.21
VAPA-208ENST00000584796 PPYP01298 95 aa1.23□□□□□ -2.21
VAPA-208ENST00000584796 S100A8P05109 93 aa1.23□□□□□ -2.21
VAPA-208ENST00000584796 GPX1P07203 203 aa1.23□□□□□ -2.21
VAPA-208ENST00000584796 ETV6P41212 452 aa1.23□□□□□ -2.21
VAPA-208ENST00000584796 SNRPD3P62318 126 aaKnown RBP1.23□□□□□ -2.21
VAPA-208ENST00000584796 MT1HP80294 61 aa1.23□□□□□ -2.21
VAPA-208ENST00000584796 NEDD8Q15843 81 aa1.23□□□□□ -2.21
VAPA-208ENST00000584796 PYDC2Q56P42 97 aa1.23□□□□□ -2.21
VAPA-208ENST00000584796 LINC01556Q5JQF7 62 aa1.23□□□□□ -2.21
VAPA-208ENST00000584796 LCN15Q6UWW0 184 aa1.23□□□□□ -2.21
VAPA-208ENST00000584796 VSTM2AQ8TAG5 236 aa1.23□□□□□ -2.21
VAPA-208ENST00000584796 AP1S3Q96PC3 154 aa1.23□□□□□ -2.21
VAPA-208ENST00000584796 NDUFB11Q9NX14 153 aa1.23□□□□□ -2.21
VAPA-208ENST00000584796 LSM2Q9Y333 95 aaKnown RBP1.23□□□□□ -2.21
VAPA-208ENST00000584796 TRGV2A0A075B6R0 118 aa1.22□□□□□ -2.21
VAPA-208ENST00000584796 TRBV27A0A0K0K1C4 114 aa1.22□□□□□ -2.21
VAPA-208ENST00000584796 A0A1W2PNM2 257 aa1.22□□□□□ -2.21
VAPA-208ENST00000584796 FAM24AA6NFZ4 105 aa1.22□□□□□ -2.21
VAPA-208ENST00000584796 F6UZH7 168 aa1.22□□□□□ -2.21
VAPA-208ENST00000584796 IGKV4-1P06312 121 aa1.22□□□□□ -2.21
VAPA-208ENST00000584796 FOXA3P55318 350 aaPredicted RBP1.22□□□□□ -2.21
VAPA-208ENST00000584796 GNG2P59768 71 aa1.22□□□□□ -2.21
VAPA-208ENST00000584796 CIRBPQ14011 172 aaKnown RBP1.22□□□□□ -2.21
VAPA-208ENST00000584796 ZNF846Q147U1 533 aa1.22□□□□□ -2.21
VAPA-208ENST00000584796 HSD17B12Q53GQ0 312 aa1.22□□□□□ -2.21
VAPA-208ENST00000584796 KRTAP26-1Q6PEX3 210 aa1.22□□□□□ -2.21
VAPA-208ENST00000584796 PATE2Q6UY27 113 aa1.22□□□□□ -2.21
VAPA-208ENST00000584796 SOSTDC1Q6X4U4 206 aa1.22□□□□□ -2.21
VAPA-208ENST00000584796 OR5H6Q8NGV6 325 aa1.22□□□□□ -2.21
VAPA-208ENST00000584796 BRK1Q8WUW1 75 aa1.22□□□□□ -2.21
VAPA-208ENST00000584796 CST9LQ9H4G1 147 aa1.22□□□□□ -2.21
VAPA-208ENST00000584796 RPRMQ9NS64 109 aa1.22□□□□□ -2.21
VAPA-208ENST00000584796 MUC12Q9UKN1 5478 aa1.21□□□□□ -2.22
VAPA-208ENST00000584796 MUC21A0A140T8X8 626 aa1.21□□□□□ -2.22
VAPA-208ENST00000584796 FAM236AA0A1B0GUQ0 79 aa1.21□□□□□ -2.22
VAPA-208ENST00000584796 FAM236BA0A1B0GV22 79 aa1.21□□□□□ -2.22
VAPA-208ENST00000584796 K7ERJ3 54 aa1.21□□□□□ -2.22
VAPA-208ENST00000584796 TIMM17BO60830 172 aa1.21□□□□□ -2.22
VAPA-208ENST00000584796 SNAPC5O75971 98 aa1.21□□□□□ -2.22
VAPA-208ENST00000584796 PMP2P02689 132 aa1.21□□□□□ -2.22
VAPA-208ENST00000584796 MT-ND6P03923 174 aa1.21□□□□□ -2.22
VAPA-208ENST00000584796 TRGC1P0CF51 173 aa1.21□□□□□ -2.22
VAPA-208ENST00000584796 CRYGAP11844 174 aa1.21□□□□□ -2.22
VAPA-208ENST00000584796 AKR1D1P51857 326 aa1.21□□□□□ -2.22
VAPA-208ENST00000584796 TMEM258P61165 79 aa1.21□□□□□ -2.22
VAPA-208ENST00000584796 LSM3P62310 102 aaKnown RBP1.21□□□□□ -2.22
VAPA-208ENST00000584796 MRPS36P82909 103 aaKnown RBP1.21□□□□□ -2.22
VAPA-208ENST00000584796 ERHP84090 104 aaKnown RBP1.21□□□□□ -2.22
VAPA-208ENST00000584796 SPANXN5Q5MJ07 72 aa1.21□□□□□ -2.22
VAPA-208ENST00000584796 Q6ZQT0 140 aa1.21□□□□□ -2.22
VAPA-208ENST00000584796 SPACA4Q8TDM5 124 aa1.21□□□□□ -2.22
VAPA-208ENST00000584796 DIRC1Q969H9 104 aa1.21□□□□□ -2.22
VAPA-208ENST00000584796 PRELID3AQ96N28 172 aa1.21□□□□□ -2.22
VAPA-208ENST00000584796 RETNLBQ9BQ08 111 aa1.21□□□□□ -2.22
VAPA-208ENST00000584796 NAA38Q9BRA0 125 aaKnown RBP1.21□□□□□ -2.22
VAPA-208ENST00000584796 Q9BRP9 147 aa1.21□□□□□ -2.22
VAPA-208ENST00000584796 PSMG3Q9BT73 122 aaPredicted RBP1.21□□□□□ -2.22
VAPA-208ENST00000584796 ATG5Q9H1Y0 275 aa1.21□□□□□ -2.22
VAPA-208ENST00000584796 SCN3BQ9NY72 215 aa1.21□□□□□ -2.22
VAPA-208ENST00000584796 PLAC8Q9NZF1 115 aa1.21□□□□□ -2.22
VAPA-208ENST00000584796 PRO0255Q9UI72 69 aa1.21□□□□□ -2.22
VAPA-208ENST00000584796 ZFP30Q9Y2G7 519 aa1.21□□□□□ -2.22
VAPA-208ENST00000584796 A0A1B0GVG6 124 aa1.2□□□□□ -2.22
VAPA-208ENST00000584796 C20orf202A1L168 122 aa1.2□□□□□ -2.22
VAPA-208ENST00000584796 HMSDA8MTL9 139 aa1.2□□□□□ -2.22
VAPA-208ENST00000584796 H3BRN7 92 aa1.2□□□□□ -2.22
VAPA-208ENST00000584796 M0R3E3 92 aa1.2□□□□□ -2.22
VAPA-208ENST00000584796 UQCRQO14949 82 aa1.2□□□□□ -2.22
VAPA-208ENST00000584796 CCL25O15444 150 aa1.2□□□□□ -2.22
VAPA-208ENST00000584796 IGLV6-57P01721 117 aa1.2□□□□□ -2.22
VAPA-208ENST00000584796 TCRAP04437 139 aa1.2□□□□□ -2.22
VAPA-208ENST00000584796 FGF7P21781 194 aa1.2□□□□□ -2.22
VAPA-208ENST00000584796 HINT1P49773 126 aaPredicted RBP1.2□□□□□ -2.22
VAPA-208ENST00000584796 MRPS10P82664 201 aaKnown RBP1.2□□□□□ -2.22
VAPA-208ENST00000584796 CATR1Q13166 79 aa1.2□□□□□ -2.22
VAPA-208ENST00000584796 ZNF345Q14585 488 aa1.2□□□□□ -2.22
VAPA-208ENST00000584796 TEX261Q6UWH6 196 aa1.2□□□□□ -2.22
VAPA-208ENST00000584796 ENHOQ6UWT2 76 aa1.2□□□□□ -2.22
VAPA-208ENST00000584796 C7orf65Q6ZTY9 151 aa1.2□□□□□ -2.22
VAPA-208ENST00000584796 TEN1Q86WV5 123 aa1.2□□□□□ -2.22
VAPA-208ENST00000584796 C9orf163Q8N9P6 203 aa1.2□□□□□ -2.22
VAPA-208ENST00000584796 ZNF431Q8TF32 576 aaPredicted RBP1.2□□□□□ -2.22
VAPA-208ENST00000584796 PDCD10Q9BUL8 212 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms