RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 UBE2AP49459 152 aa10.67□□□□□ -0.7
SRSF1-208ENST00000584773 LINC00310P59036 64 aa10.67□□□□□ -0.7
SRSF1-208ENST00000584773 H0Y8G0 127 aa10.66□□□□□ -0.7
SRSF1-208ENST00000584773 HSBP1O75506 76 aa10.66□□□□□ -0.7
SRSF1-208ENST00000584773 COX17Q14061 63 aa10.66□□□□□ -0.7
SRSF1-208ENST00000584773 LINC00158P58513 81 aa10.65□□□□□ -0.7
SRSF1-208ENST00000584773 PRLHP81277 87 aa10.65□□□□□ -0.7
SRSF1-208ENST00000584773 SERF1AO75920 110 aa10.63□□□□□ -0.71
SRSF1-208ENST00000584773 TMEM126AQ9H061 195 aa10.63□□□□□ -0.71
SRSF1-208ENST00000584773 SMIM13P0DJ93 91 aa10.62□□□□□ -0.71
SRSF1-208ENST00000584773 RPL24P83731 157 aaKnown RBP10.62□□□□□ -0.71
SRSF1-208ENST00000584773 SFTA2Q6UW10 78 aa10.62□□□□□ -0.71
SRSF1-208ENST00000584773 M0R378 163 aa10.61□□□□□ -0.71
SRSF1-208ENST00000584773 TSPAN13O95857 204 aa10.61□□□□□ -0.71
SRSF1-208ENST00000584773 FAM19A1Q7Z5A9 133 aa10.61□□□□□ -0.71
SRSF1-208ENST00000584773 KRTAP13-2Q52LG2 175 aa10.6□□□□□ -0.71
SRSF1-208ENST00000584773 CRYGAP11844 174 aa10.59□□□□□ -0.71
SRSF1-208ENST00000584773 TSPEAR-AS2P59090 65 aa10.59□□□□□ -0.71
SRSF1-208ENST00000584773 MEIG1Q5JSS6 88 aa10.59□□□□□ -0.71
SRSF1-208ENST00000584773 TYMSOSQ8TAI1 123 aa10.59□□□□□ -0.71
SRSF1-208ENST00000584773 LEPROTL1O95214 131 aa10.58□□□□□ -0.71
SRSF1-208ENST00000584773 PRR4Q16378 134 aa10.58□□□□□ -0.71
SRSF1-208ENST00000584773 COLCA2A8K830 154 aa10.58□□□□□ -0.72
SRSF1-208ENST00000584773 FABP4P15090 132 aa10.58□□□□□ -0.72
SRSF1-208ENST00000584773 MIR7-3HGQ8N6C7 128 aa10.58□□□□□ -0.72
SRSF1-208ENST00000584773 PMCHL2Q9BQD1 86 aa10.58□□□□□ -0.72
SRSF1-208ENST00000584773 NDUFA12Q9UI09 145 aa10.57□□□□□ -0.72
SRSF1-208ENST00000584773 NCR3O14931 201 aa10.56□□□□□ -0.72
SRSF1-208ENST00000584773 BOD1L2Q8IYS8 172 aa10.56□□□□□ -0.72
SRSF1-208ENST00000584773 HERV-K104P63124 156 aa10.54□□□□□ -0.72
SRSF1-208ENST00000584773 DAND5Q8N907 189 aa10.53□□□□□ -0.72
SRSF1-208ENST00000584773 HIGD2AQ9BW72 106 aa10.53□□□□□ -0.72
SRSF1-208ENST00000584773 MYMXA0A1B0GTQ4 84 aa10.52□□□□□ -0.73
SRSF1-208ENST00000584773 LEPROTO15243 131 aa10.52□□□□□ -0.73
SRSF1-208ENST00000584773 PLEKHB2Q96CS7 222 aa10.52□□□□□ -0.73
SRSF1-208ENST00000584773 FAM229BQ4G0N7 80 aa10.51□□□□□ -0.73
SRSF1-208ENST00000584773 HSPB8Q9UJY1 196 aa10.51□□□□□ -0.73
SRSF1-208ENST00000584773 DPM2O94777 84 aa10.49□□□□□ -0.73
SRSF1-208ENST00000584773 PLNP26678 52 aa10.49□□□□□ -0.73
SRSF1-208ENST00000584773 C3orf22Q8N5N4 141 aa10.49□□□□□ -0.73
SRSF1-208ENST00000584773 J3QQQ9 107 aa10.48□□□□□ -0.73
SRSF1-208ENST00000584773 IGKCP01834 107 aa10.48□□□□□ -0.73
SRSF1-208ENST00000584773 RETNLBQ9BQ08 111 aa10.48□□□□□ -0.73
SRSF1-208ENST00000584773 IGKV2D-26A0A0A0MRZ7 120 aa10.47□□□□□ -0.73
SRSF1-208ENST00000584773 TRBV10-3A0A0K0K1G6 114 aa10.47□□□□□ -0.73
SRSF1-208ENST00000584773 PRYO14603 147 aa10.47□□□□□ -0.73
SRSF1-208ENST00000584773 LINC00304Q8N9R0 145 aa10.47□□□□□ -0.73
SRSF1-208ENST00000584773 MAP1LC3CQ9BXW4 147 aa10.46□□□□□ -0.73
SRSF1-208ENST00000584773 LINC00587B1AMM8 73 aa10.45□□□□□ -0.74
SRSF1-208ENST00000584773 SPRR1AP35321 89 aa10.45□□□□□ -0.74
SRSF1-208ENST00000584773 HERVK_113P61574 105 aa10.45□□□□□ -0.74
SRSF1-208ENST00000584773 SPRR4Q96PI1 79 aa10.45□□□□□ -0.74
SRSF1-208ENST00000584773 KCNQ1DNQ9H478 68 aa10.45□□□□□ -0.74
SRSF1-208ENST00000584773 KRTAP4-16G5E9R7 235 aaPredicted RBP10.44□□□□□ -0.74
SRSF1-208ENST00000584773 LGALS3P17931 250 aaKnown RBP10.44□□□□□ -0.74
SRSF1-208ENST00000584773 HIST1H2BKO60814 126 aa10.43□□□□□ -0.74
SRSF1-208ENST00000584773 HIST1H2BJP06899 126 aa10.43□□□□□ -0.74
SRSF1-208ENST00000584773 HIST1H2BOP23527 126 aa10.43□□□□□ -0.74
SRSF1-208ENST00000584773 HIST1H2BBP33778 126 aa10.43□□□□□ -0.74
SRSF1-208ENST00000584773 HIST1H2BDP58876 126 aa10.43□□□□□ -0.74
SRSF1-208ENST00000584773 HIST1H2BCP62807 126 aa10.43□□□□□ -0.74
SRSF1-208ENST00000584773 HIST2H2BEQ16778 126 aa10.43□□□□□ -0.74
SRSF1-208ENST00000584773 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.43□□□□□ -0.74
SRSF1-208ENST00000584773 HIST1H2BHQ93079 126 aa10.43□□□□□ -0.74
SRSF1-208ENST00000584773 HIST1H2BNQ99877 126 aa10.43□□□□□ -0.74
SRSF1-208ENST00000584773 HIST1H2BMQ99879 126 aa10.43□□□□□ -0.74
SRSF1-208ENST00000584773 LINC00337Q8N6G1 96 aa10.42□□□□□ -0.74
SRSF1-208ENST00000584773 MUC2Q02817 5179 aa10.41□□□□□ -0.74
SRSF1-208ENST00000584773 ETDCA0A1B0GVM5 59 aa10.41□□□□□ -0.74
SRSF1-208ENST00000584773 EIF4EBP3O60516 100 aaPredicted RBP10.41□□□□□ -0.74
SRSF1-208ENST00000584773 NPC2P61916 151 aa10.41□□□□□ -0.74
SRSF1-208ENST00000584773 SMCR5Q8TEV8 140 aa10.41□□□□□ -0.74
SRSF1-208ENST00000584773 PPDPFQ9H3Y8 114 aa10.41□□□□□ -0.74
SRSF1-208ENST00000584773 LOC107984156A0A0G2JMH3 177 aa10.4□□□□□ -0.74
SRSF1-208ENST00000584773 NMUP48645 174 aa10.4□□□□□ -0.74
SRSF1-208ENST00000584773 SOSTDC1Q6X4U4 206 aa10.4□□□□□ -0.74
SRSF1-208ENST00000584773 ARL17AQ8IVW1 177 aa10.4□□□□□ -0.74
SRSF1-208ENST00000584773 DDTP30046 118 aa10.39□□□□□ -0.75
SRSF1-208ENST00000584773 ADAMTSL4-AS1Q5T5F5 129 aa10.39□□□□□ -0.75
SRSF1-208ENST00000584773 A0A0J9YXY3 114 aa10.38□□□□□ -0.75
SRSF1-208ENST00000584773 E9PLD3 99 aa10.38□□□□□ -0.75
SRSF1-208ENST00000584773 SYS1-DBNDD2H3BUS1 97 aa10.38□□□□□ -0.75
SRSF1-208ENST00000584773 B5MCH6 92 aa10.37□□□□□ -0.75
SRSF1-208ENST00000584773 ERC2-IT1O76042 136 aa10.36□□□□□ -0.75
SRSF1-208ENST00000584773 MIEN1Q9BRT3 115 aa10.36□□□□□ -0.75
SRSF1-208ENST00000584773 SPANXB1Q9NS25 103 aaPredicted RBP10.36□□□□□ -0.75
SRSF1-208ENST00000584773 ZNF706Q9Y5V0 76 aaPredicted RBP10.36□□□□□ -0.75
SRSF1-208ENST00000584773 TRBV10-2A0A0K0K1G8 114 aa10.35□□□□□ -0.75
SRSF1-208ENST00000584773 Q9BRP9 147 aa10.34□□□□□ -0.75
SRSF1-208ENST00000584773 LINC01545Q5VT33 79 aa10.33□□□□□ -0.76
SRSF1-208ENST00000584773 NDUFC2O95298 119 aa10.33□□□□□ -0.76
SRSF1-208ENST00000584773 IGLV6-57P01721 117 aa10.33□□□□□ -0.76
SRSF1-208ENST00000584773 S100A7L2Q5SY68 101 aa10.33□□□□□ -0.76
SRSF1-208ENST00000584773 GAGE2AQ6NT46 116 aa10.33□□□□□ -0.76
SRSF1-208ENST00000584773 Q8NBF4 154 aa10.33□□□□□ -0.76
SRSF1-208ENST00000584773 TTTY13Q9BZ97 58 aa10.33□□□□□ -0.76
SRSF1-208ENST00000584773 TMA7Q9Y2S6 64 aaKnown RBP10.33□□□□□ -0.76
SRSF1-208ENST00000584773 S100A12P80511 92 aa10.32□□□□□ -0.76
SRSF1-208ENST00000584773 LITAFQ99732 161 aa10.32□□□□□ -0.76
SRSF1-208ENST00000584773 C3orf79P0CE67 100 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms