RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 COA6Q5JTJ3 125 aaKnown RBP6.22□□□□□ -1.41
GGA3-219ENST00000584550 FAM19A5Q7Z5A7 132 aaPredicted RBP6.22□□□□□ -1.41
GGA3-219ENST00000584550 HSPB8Q9UJY1 196 aa6.22□□□□□ -1.41
GGA3-219ENST00000584550 IGLV5-39A0A0G2JS06 123 aa6.21□□□□□ -1.42
GGA3-219ENST00000584550 TSTD3H0UI37 97 aa6.21□□□□□ -1.42
GGA3-219ENST00000584550 PHF5AQ7RTV0 110 aaKnown RBP6.21□□□□□ -1.42
GGA3-219ENST00000584550 PMCHL2Q9BQD1 86 aa6.21□□□□□ -1.42
GGA3-219ENST00000584550 XAGE1AQ9HD64 81 aa6.21□□□□□ -1.42
GGA3-219ENST00000584550 C9orf129Q5T035 196 aaKnown RBP6.2□□□□□ -1.42
GGA3-219ENST00000584550 ZNF625Q96I27 306 aaPredicted RBP6.2□□□□□ -1.42
GGA3-219ENST00000584550 PSORS1C2Q9UIG4 136 aa6.2□□□□□ -1.42
GGA3-219ENST00000584550 TMEM223A0PJW6 202 aa6.19□□□□□ -1.42
GGA3-219ENST00000584550 PFN2P35080 140 aa6.19□□□□□ -1.42
GGA3-219ENST00000584550 MAP1LC3CQ9BXW4 147 aa6.19□□□□□ -1.42
GGA3-219ENST00000584550 FSIP2Q5CZC0 6907 aa6.18□□□□□ -1.42
GGA3-219ENST00000584550 M0QXV9 152 aa6.18□□□□□ -1.42
GGA3-219ENST00000584550 JOSD1Q15040 202 aaPredicted RBP6.18□□□□□ -1.42
GGA3-219ENST00000584550 DPM2O94777 84 aa6.17□□□□□ -1.42
GGA3-219ENST00000584550 DDTP30046 118 aa6.17□□□□□ -1.42
GGA3-219ENST00000584550 C1orf137Q5JT78 98 aa6.17□□□□□ -1.42
GGA3-219ENST00000584550 KRTAP7-1Q8IUC3 87 aa6.17□□□□□ -1.42
GGA3-219ENST00000584550 HIST1H2BLQ99880 126 aa6.17□□□□□ -1.42
GGA3-219ENST00000584550 A0A0U1RRA0 63 aa6.16□□□□□ -1.42
GGA3-219ENST00000584550 PLNP26678 52 aa6.16□□□□□ -1.42
GGA3-219ENST00000584550 UBE2BP63146 152 aa6.16□□□□□ -1.42
GGA3-219ENST00000584550 C14orf144Q96I85 54 aa6.16□□□□□ -1.42
GGA3-219ENST00000584550 ERG28Q9UKR5 140 aa6.16□□□□□ -1.42
GGA3-219ENST00000584550 IGKCP01834 107 aa6.15□□□□□ -1.42
GGA3-219ENST00000584550 LINC00158P58513 81 aa6.15□□□□□ -1.42
GGA3-219ENST00000584550 KRTAP11-1Q8IUC1 163 aa6.15□□□□□ -1.42
GGA3-219ENST00000584550 SYS1-DBNDD2H3BUS1 97 aa6.14□□□□□ -1.43
GGA3-219ENST00000584550 C22orf24Q9Y442 160 aa6.14□□□□□ -1.43
GGA3-219ENST00000584550 GAGE10A6NGK3 116 aa6.13□□□□□ -1.43
GGA3-219ENST00000584550 KRTDAPP60985 99 aa6.13□□□□□ -1.43
GGA3-219ENST00000584550 HERVK_113P61574 105 aa6.13□□□□□ -1.43
GGA3-219ENST00000584550 MEIG1Q5JSS6 88 aa6.13□□□□□ -1.43
GGA3-219ENST00000584550 SFTA2Q6UW10 78 aa6.13□□□□□ -1.43
GGA3-219ENST00000584550 SND1-IT1Q9HBX3 110 aa6.13□□□□□ -1.43
GGA3-219ENST00000584550 NDUFA12Q9UI09 145 aa6.13□□□□□ -1.43
GGA3-219ENST00000584550 LEPROTO15243 131 aa6.12□□□□□ -1.43
GGA3-219ENST00000584550 SMIM13P0DJ93 91 aa6.12□□□□□ -1.43
GGA3-219ENST00000584550 TSPEAR-AS2P59090 65 aa6.12□□□□□ -1.43
GGA3-219ENST00000584550 DIRC1Q969H9 104 aa6.12□□□□□ -1.43
GGA3-219ENST00000584550 PLEKHB2Q96CS7 222 aa6.12□□□□□ -1.43
GGA3-219ENST00000584550 MYMXA0A1B0GTQ4 84 aa6.11□□□□□ -1.43
GGA3-219ENST00000584550 J3QQQ9 107 aa6.11□□□□□ -1.43
GGA3-219ENST00000584550 TSPAN13O95857 204 aa6.11□□□□□ -1.43
GGA3-219ENST00000584550 IGLV7-43P04211 117 aa6.11□□□□□ -1.43
GGA3-219ENST00000584550 C3orf79P0CE67 100 aa6.11□□□□□ -1.43
GGA3-219ENST00000584550 LGALS3P17931 250 aaKnown RBP6.11□□□□□ -1.43
GGA3-219ENST00000584550 COX17Q14061 63 aa6.11□□□□□ -1.43
GGA3-219ENST00000584550 PET117Q6UWS5 81 aa6.11□□□□□ -1.43
GGA3-219ENST00000584550 MRPL55Q7Z7F7 128 aaKnown RBP6.11□□□□□ -1.43
GGA3-219ENST00000584550 NKAPP1Q8N9T2 125 aa6.11□□□□□ -1.43
GGA3-219ENST00000584550 CRCT1Q9UGL9 99 aa6.11□□□□□ -1.43
GGA3-219ENST00000584550 RPL37AP8A6NKH3 93 aa6.1□□□□□ -1.43
GGA3-219ENST00000584550 H0Y9J4 135 aa6.1□□□□□ -1.43
GGA3-219ENST00000584550 HERV-K104P63124 156 aa6.1□□□□□ -1.43
GGA3-219ENST00000584550 LINC01545Q5VT33 79 aa6.1□□□□□ -1.43
GGA3-219ENST00000584550 LINC00167Q96N53 147 aa6.1□□□□□ -1.43
GGA3-219ENST00000584550 IGLV1-50A0A075B6I6 118 aa6.09□□□□□ -1.43
GGA3-219ENST00000584550 PRO1933Q9H354 126 aa6.09□□□□□ -1.43
GGA3-219ENST00000584550 TP73-AS1Q9UF72 201 aa6.09□□□□□ -1.43
GGA3-219ENST00000584550 A0A1B0GV90 55 aa6.08□□□□□ -1.44
GGA3-219ENST00000584550 KRTAP1-4P0C5Y4 121 aa6.08□□□□□ -1.44
GGA3-219ENST00000584550 RPL24P83731 157 aaKnown RBP6.08□□□□□ -1.44
GGA3-219ENST00000584550 MIR7-3HGQ8N6C7 128 aa6.08□□□□□ -1.44
GGA3-219ENST00000584550 IGLV5-37A0A075B6J1 123 aa6.07□□□□□ -1.44
GGA3-219ENST00000584550 IGKV2-28A0A075B6P5 120 aa6.07□□□□□ -1.44
GGA3-219ENST00000584550 C20orf202A1L168 122 aa6.07□□□□□ -1.44
GGA3-219ENST00000584550 E9PLD3 99 aa6.07□□□□□ -1.44
GGA3-219ENST00000584550 M0R143 59 aa6.07□□□□□ -1.44
GGA3-219ENST00000584550 IGKV2D-28P01615 120 aa6.07□□□□□ -1.44
GGA3-219ENST00000584550 VPREB1P12018 145 aa6.07□□□□□ -1.44
GGA3-219ENST00000584550 NMUP48645 174 aa6.07□□□□□ -1.44
GGA3-219ENST00000584550 DAND5Q8N907 189 aa6.07□□□□□ -1.44
GGA3-219ENST00000584550 Q8NDZ9 215 aa6.07□□□□□ -1.44
GGA3-219ENST00000584550 BOD1L2Q8IYS8 172 aa6.06□□□□□ -1.44
GGA3-219ENST00000584550 ATOH7Q8N100 152 aa6.06□□□□□ -1.44
GGA3-219ENST00000584550 LCE2DQ5TA82 110 aaPredicted RBP6.05□□□□□ -1.44
GGA3-219ENST00000584550 MUC17Q685J3 4493 aa6.04□□□□□ -1.44
GGA3-219ENST00000584550 IGKV2D-26A0A0A0MRZ7 120 aa6.04□□□□□ -1.44
GGA3-219ENST00000584550 A0A0J9YXY3 114 aa6.04□□□□□ -1.44
GGA3-219ENST00000584550 NCR3O14931 201 aa6.04□□□□□ -1.44
GGA3-219ENST00000584550 BCE1O60756 84 aa6.04□□□□□ -1.44
GGA3-219ENST00000584550 SCGB1D1O95968 90 aa6.04□□□□□ -1.44
GGA3-219ENST00000584550 RPL13AP40429 203 aaKnown RBP6.04□□□□□ -1.44
GGA3-219ENST00000584550 NPC2P61916 151 aa6.04□□□□□ -1.44
GGA3-219ENST00000584550 ZNF815PA8K554 130 aa6.03□□□□□ -1.44
GGA3-219ENST00000584550 UBE2AP49459 152 aa6.03□□□□□ -1.44
GGA3-219ENST00000584550 MIEN1Q9BRT3 115 aa6.03□□□□□ -1.44
GGA3-219ENST00000584550 TTTY13Q9BZ97 58 aa6.03□□□□□ -1.44
GGA3-219ENST00000584550 TMEM238C9JI98 176 aa6.02□□□□□ -1.45
GGA3-219ENST00000584550 M0R378 163 aa6.02□□□□□ -1.45
GGA3-219ENST00000584550 ZNF861PO60384 105 aa6.02□□□□□ -1.45
GGA3-219ENST00000584550 RPL28P46779 137 aaKnown RBP6.02□□□□□ -1.45
GGA3-219ENST00000584550 ANKRD39Q53RE8 183 aa6.02□□□□□ -1.45
GGA3-219ENST00000584550 SNHG12Q9BXW3 62 aa6.02□□□□□ -1.45
GGA3-219ENST00000584550 ADAMTSL4-AS1Q5T5F5 129 aa6.01□□□□□ -1.45
GGA3-219ENST00000584550 RETNLBQ9BQ08 111 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms