RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 NPC2P61916 151 aa11.63□□□□□ -0.55
RFFL-211ENST00000584541 LINC00518Q8N0U6 118 aa11.63□□□□□ -0.55
RFFL-211ENST00000584541 SPANXB1Q9NS25 103 aaPredicted RBP11.63□□□□□ -0.55
RFFL-211ENST00000584541 HIGD1BQ9P298 99 aa11.63□□□□□ -0.55
RFFL-211ENST00000584541 A0A087WYN8 130 aa11.62□□□□□ -0.55
RFFL-211ENST00000584541 RPL24P83731 157 aaKnown RBP11.62□□□□□ -0.55
RFFL-211ENST00000584541 IFITM1P13164 125 aa11.61□□□□□ -0.55
RFFL-211ENST00000584541 FAM19A5Q7Z5A7 132 aaPredicted RBP11.61□□□□□ -0.55
RFFL-211ENST00000584541 LINC00308Q8TCZ7 52 aa11.61□□□□□ -0.55
RFFL-211ENST00000584541 PRO1933Q9H354 126 aa11.61□□□□□ -0.55
RFFL-211ENST00000584541 PLA2G2DQ9UNK4 145 aa11.61□□□□□ -0.55
RFFL-211ENST00000584541 HERC2O95714 4834 aa11.61□□□□□ -0.55
RFFL-211ENST00000584541 LOC107984156A0A0G2JMH3 177 aa11.6□□□□□ -0.55
RFFL-211ENST00000584541 FAM168BA1KXE4 195 aa11.6□□□□□ -0.55
RFFL-211ENST00000584541 ARL17AQ8IVW1 177 aa11.6□□□□□ -0.55
RFFL-211ENST00000584541 HIST1H4GQ99525 98 aa11.6□□□□□ -0.55
RFFL-211ENST00000584541 PLAC8Q9NZF1 115 aa11.6□□□□□ -0.55
RFFL-211ENST00000584541 A0A1W2PNN7 141 aa11.59□□□□□ -0.55
RFFL-211ENST00000584541 TSTD3H0UI37 97 aa11.59□□□□□ -0.55
RFFL-211ENST00000584541 C2orf91Q6ZV80 131 aa11.59□□□□□ -0.55
RFFL-211ENST00000584541 SCXQ7RTU7 201 aa11.59□□□□□ -0.55
RFFL-211ENST00000584541 PKHD1P08F94 4074 aa11.59□□□□□ -0.55
RFFL-211ENST00000584541 NKAPP1Q8N9T2 125 aa11.58□□□□□ -0.56
RFFL-211ENST00000584541 CIRBP-AS1Q8TBR5 109 aa11.58□□□□□ -0.56
RFFL-211ENST00000584541 SERTAD4-AS1Q5TG53 156 aa11.57□□□□□ -0.56
RFFL-211ENST00000584541 SOSTDC1Q6X4U4 206 aa11.57□□□□□ -0.56
RFFL-211ENST00000584541 MUSTN1Q8IVN3 82 aa11.57□□□□□ -0.56
RFFL-211ENST00000584541 PPDPFQ9H3Y8 114 aa11.57□□□□□ -0.56
RFFL-211ENST00000584541 HNRNPA3P51991 378 aaKnown RBP11.56□□□□□ -0.56
RFFL-211ENST00000584541 IGLV5-37A0A075B6J1 123 aa11.55□□□□□ -0.56
RFFL-211ENST00000584541 M0QXV9 152 aa11.55□□□□□ -0.56
RFFL-211ENST00000584541 NDUFC2O95298 119 aa11.55□□□□□ -0.56
RFFL-211ENST00000584541 VPREB1P12018 145 aa11.55□□□□□ -0.56
RFFL-211ENST00000584541 HAMPP81172 84 aa11.55□□□□□ -0.56
RFFL-211ENST00000584541 EPM2AB3EWF7 344 aa11.54□□□□□ -0.56
RFFL-211ENST00000584541 EIF4EBP3O60516 100 aaPredicted RBP11.54□□□□□ -0.56
RFFL-211ENST00000584541 CDK2AP2O75956 126 aa11.54□□□□□ -0.56
RFFL-211ENST00000584541 TAL2Q16559 108 aa11.54□□□□□ -0.56
RFFL-211ENST00000584541 LBHQ53QV2 105 aaPredicted RBP11.54□□□□□ -0.56
RFFL-211ENST00000584541 C22orf24Q9Y442 160 aa11.54□□□□□ -0.56
RFFL-211ENST00000584541 XGP55808 180 aa11.53□□□□□ -0.56
RFFL-211ENST00000584541 KRTAP7-1Q8IUC3 87 aa11.53□□□□□ -0.56
RFFL-211ENST00000584541 MRPL55Q7Z7F7 128 aaKnown RBP11.52□□□□□ -0.57
RFFL-211ENST00000584541 Q8NDZ9 215 aa11.52□□□□□ -0.57
RFFL-211ENST00000584541 RYR1P21817 5038 aa11.52□□□□□ -0.57
RFFL-211ENST00000584541 DYNC1H1Q14204 4646 aaKnown RBP11.52□□□□□ -0.57
RFFL-211ENST00000584541 M0R378 163 aa11.51□□□□□ -0.57
RFFL-211ENST00000584541 NCR3O14931 201 aa11.51□□□□□ -0.57
RFFL-211ENST00000584541 HSD52Q0P140 79 aa11.51□□□□□ -0.57
RFFL-211ENST00000584541 PHF5AQ7RTV0 110 aaKnown RBP11.51□□□□□ -0.57
RFFL-211ENST00000584541 TRBV10-2A0A0K0K1G8 114 aa11.5□□□□□ -0.57
RFFL-211ENST00000584541 C7orf33Q8WU49 177 aa11.5□□□□□ -0.57
RFFL-211ENST00000584541 DNAH8Q96JB1 4490 aa11.5□□□□□ -0.57
RFFL-211ENST00000584541 LRP1BQ9NZR2 4599 aa11.49□□□□□ -0.57
RFFL-211ENST00000584541 UBE2BP63146 152 aa11.49□□□□□ -0.57
RFFL-211ENST00000584541 PRR3P79522 188 aaKnown RBP11.49□□□□□ -0.57
RFFL-211ENST00000584541 CEND1Q8N111 149 aa11.49□□□□□ -0.57
RFFL-211ENST00000584541 A4D1N5 150 aa11.47□□□□□ -0.57
RFFL-211ENST00000584541 GAGE10A6NGK3 116 aa11.47□□□□□ -0.57
RFFL-211ENST00000584541 LINC00167Q96N53 147 aa11.47□□□□□ -0.57
RFFL-211ENST00000584541 TMEM238LA0A1B0GVL6 79 aa11.46□□□□□ -0.57
RFFL-211ENST00000584541 A6NJY4 79 aa11.46□□□□□ -0.57
RFFL-211ENST00000584541 S100A7L2Q5SY68 101 aa11.46□□□□□ -0.57
RFFL-211ENST00000584541 IGKV2-28A0A075B6P5 120 aa11.44□□□□□ -0.58
RFFL-211ENST00000584541 RPL37AP8A6NKH3 93 aa11.44□□□□□ -0.58
RFFL-211ENST00000584541 IGKV2D-28P01615 120 aa11.44□□□□□ -0.58
RFFL-211ENST00000584541 OR13C6PQ8NH95 151 aa11.44□□□□□ -0.58
RFFL-211ENST00000584541 KIAA1109Q2LD37 5005 aa11.43□□□□□ -0.58
RFFL-211ENST00000584541 DDTP30046 118 aa11.43□□□□□ -0.58
RFFL-211ENST00000584541 CTAG1AP78358 180 aa11.43□□□□□ -0.58
RFFL-211ENST00000584541 TRAV13-2A0A0B4J235 113 aa11.42□□□□□ -0.58
RFFL-211ENST00000584541 SMR3BP02814 79 aaPredicted RBP11.42□□□□□ -0.58
RFFL-211ENST00000584541 TMEM126AQ9H061 195 aa11.42□□□□□ -0.58
RFFL-211ENST00000584541 CBY1Q9Y3M2 126 aa11.42□□□□□ -0.58
RFFL-211ENST00000584541 IGLV1-50A0A075B6I6 118 aa11.41□□□□□ -0.58
RFFL-211ENST00000584541 TRBV10-3A0A0K0K1G6 114 aa11.41□□□□□ -0.58
RFFL-211ENST00000584541 A6NDN8 102 aa11.41□□□□□ -0.58
RFFL-211ENST00000584541 LINC00528Q8N1L1 170 aa11.41□□□□□ -0.58
RFFL-211ENST00000584541 M0R143 59 aa11.4□□□□□ -0.58
RFFL-211ENST00000584541 FXYD2P54710 66 aa11.4□□□□□ -0.58
RFFL-211ENST00000584541 LINC00337Q8N6G1 96 aa11.4□□□□□ -0.58
RFFL-211ENST00000584541 IGLV6-57P01721 117 aa11.39□□□□□ -0.59
RFFL-211ENST00000584541 RAB37Q96AX2 223 aa11.39□□□□□ -0.59
RFFL-211ENST00000584541 APOBP04114 4563 aaKnown RBP11.37□□□□□ -0.59
RFFL-211ENST00000584541 A0A0B4J2C4 111 aa11.37□□□□□ -0.59
RFFL-211ENST00000584541 FAM229AH3BQW9 127 aa11.37□□□□□ -0.59
RFFL-211ENST00000584541 PRYO14603 147 aa11.37□□□□□ -0.59
RFFL-211ENST00000584541 CFC1BP0CG36 223 aa11.37□□□□□ -0.59
RFFL-211ENST00000584541 CFC1P0CG37 223 aa11.37□□□□□ -0.59
RFFL-211ENST00000584541 HINT1P49773 126 aaPredicted RBP11.36□□□□□ -0.59
RFFL-211ENST00000584541 RPL37AP61513 92 aaKnown RBP11.36□□□□□ -0.59
RFFL-211ENST00000584541 BVES-AS1Q5T3Y7 98 aa11.36□□□□□ -0.59
RFFL-211ENST00000584541 REG3GQ6UW15 175 aa11.36□□□□□ -0.59
RFFL-211ENST00000584541 KRTAP11-1Q8IUC1 163 aa11.36□□□□□ -0.59
RFFL-211ENST00000584541 KCNQ1DNQ9H478 68 aa11.36□□□□□ -0.59
RFFL-211ENST00000584541 PSORS1C2Q9UIG4 136 aa11.36□□□□□ -0.59
RFFL-211ENST00000584541 TRAV23DV6A0A075B6W5 121 aa11.35□□□□□ -0.59
RFFL-211ENST00000584541 NHP2Q9NX24 153 aaKnown RBP11.35□□□□□ -0.59
RFFL-211ENST00000584541 RPL13AP40429 203 aaKnown RBP11.34□□□□□ -0.59
RFFL-211ENST00000584541 C1orf137Q5JT78 98 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms