RNA–Protein interactions for RNA: ENST00000584042.1

CDK5RAP3-230, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 638 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-230ENST00000584042 CTAG1AP78358 180 aa10.71□□□□□ -0.69
CDK5RAP3-230ENST00000584042 GAGE2BQ13066 116 aa10.71□□□□□ -0.69
CDK5RAP3-230ENST00000584042 LINC01620Q4KN68 170 aa10.71□□□□□ -0.69
CDK5RAP3-230ENST00000584042 CEND1Q8N111 149 aa10.71□□□□□ -0.69
CDK5RAP3-230ENST00000584042 XAGE1AQ9HD64 81 aa10.71□□□□□ -0.69
CDK5RAP3-230ENST00000584042 RPL24P83731 157 aaKnown RBP10.7□□□□□ -0.7
CDK5RAP3-230ENST00000584042 C9orf129Q5T035 196 aaKnown RBP10.7□□□□□ -0.7
CDK5RAP3-230ENST00000584042 MUSTN1Q8IVN3 82 aa10.7□□□□□ -0.7
CDK5RAP3-230ENST00000584042 LINC00474Q9P2X8 69 aa10.7□□□□□ -0.7
CDK5RAP3-230ENST00000584042 EIF4EBP3O60516 100 aaPredicted RBP10.69□□□□□ -0.7
CDK5RAP3-230ENST00000584042 DNAH8Q96JB1 4490 aa10.68□□□□□ -0.7
CDK5RAP3-230ENST00000584042 IGKV2-24A0A0C4DH68 120 aa10.68□□□□□ -0.7
CDK5RAP3-230ENST00000584042 M0R143 59 aa10.68□□□□□ -0.7
CDK5RAP3-230ENST00000584042 NDUFC2O95298 119 aa10.68□□□□□ -0.7
CDK5RAP3-230ENST00000584042 PLA2G2DQ9UNK4 145 aa10.68□□□□□ -0.7
CDK5RAP3-230ENST00000584042 TMEM238LA0A1B0GVL6 79 aa10.67□□□□□ -0.7
CDK5RAP3-230ENST00000584042 A6NJY4 79 aa10.67□□□□□ -0.7
CDK5RAP3-230ENST00000584042 SPACA4Q8TDM5 124 aa10.67□□□□□ -0.7
CDK5RAP3-230ENST00000584042 DYNC1H1Q14204 4646 aaKnown RBP10.67□□□□□ -0.7
CDK5RAP3-230ENST00000584042 PCP4L1A6NKN8 68 aa10.66□□□□□ -0.7
CDK5RAP3-230ENST00000584042 CHTF8P0CG12 524 aa10.66□□□□□ -0.7
CDK5RAP3-230ENST00000584042 FXYD2P54710 66 aa10.66□□□□□ -0.7
CDK5RAP3-230ENST00000584042 PKHD1P08F94 4074 aa10.66□□□□□ -0.7
CDK5RAP3-230ENST00000584042 A4D1N5 150 aa10.65□□□□□ -0.7
CDK5RAP3-230ENST00000584042 BVES-AS1Q5T3Y7 98 aa10.65□□□□□ -0.7
CDK5RAP3-230ENST00000584042 IGLV5-37A0A075B6J1 123 aa10.64□□□□□ -0.71
CDK5RAP3-230ENST00000584042 VPREB1P12018 145 aa10.64□□□□□ -0.71
CDK5RAP3-230ENST00000584042 Q8NDZ9 215 aa10.64□□□□□ -0.71
CDK5RAP3-230ENST00000584042 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.64□□□□□ -0.71
CDK5RAP3-230ENST00000584042 HINT1P49773 126 aaPredicted RBP10.63□□□□□ -0.71
CDK5RAP3-230ENST00000584042 PANO1I0J062 215 aa10.62□□□□□ -0.71
CDK5RAP3-230ENST00000584042 KRTAP10-1P60331 282 aa10.62□□□□□ -0.71
CDK5RAP3-230ENST00000584042 SERTAD4-AS1Q5TG53 156 aa10.62□□□□□ -0.71
CDK5RAP3-230ENST00000584042 Q6ZSA8 131 aa10.62□□□□□ -0.71
CDK5RAP3-230ENST00000584042 LRP1BQ9NZR2 4599 aa10.62□□□□□ -0.71
CDK5RAP3-230ENST00000584042 A0A0B4J2C4 111 aa10.61□□□□□ -0.71
CDK5RAP3-230ENST00000584042 TRBV10-2A0A0K0K1G8 114 aa10.61□□□□□ -0.71
CDK5RAP3-230ENST00000584042 FAM168BA1KXE4 195 aa10.61□□□□□ -0.71
CDK5RAP3-230ENST00000584042 FAM19A5Q7Z5A7 132 aaPredicted RBP10.6□□□□□ -0.71
CDK5RAP3-230ENST00000584042 IGKV2-28A0A075B6P5 120 aa10.59□□□□□ -0.71
CDK5RAP3-230ENST00000584042 EPM2AB3EWF7 344 aa10.59□□□□□ -0.71
CDK5RAP3-230ENST00000584042 NCR3O14931 201 aa10.59□□□□□ -0.71
CDK5RAP3-230ENST00000584042 IGKV2D-28P01615 120 aa10.59□□□□□ -0.71
CDK5RAP3-230ENST00000584042 KRTAP7-1Q8IUC3 87 aa10.59□□□□□ -0.71
CDK5RAP3-230ENST00000584042 NKAPP1Q8N9T2 125 aa10.59□□□□□ -0.71
CDK5RAP3-230ENST00000584042 A0A1B0GWB2 263 aa10.58□□□□□ -0.72
CDK5RAP3-230ENST00000584042 A0A1W2PNN7 141 aa10.58□□□□□ -0.72
CDK5RAP3-230ENST00000584042 NHP2Q9NX24 153 aaKnown RBP10.58□□□□□ -0.72
CDK5RAP3-230ENST00000584042 A0A087WYN8 130 aa10.57□□□□□ -0.72
CDK5RAP3-230ENST00000584042 A6NDN8 102 aa10.57□□□□□ -0.72
CDK5RAP3-230ENST00000584042 M0QXV9 152 aa10.57□□□□□ -0.72
CDK5RAP3-230ENST00000584042 M0R378 163 aa10.57□□□□□ -0.72
CDK5RAP3-230ENST00000584042 CFC1BP0CG36 223 aa10.57□□□□□ -0.72
CDK5RAP3-230ENST00000584042 CFC1P0CG37 223 aa10.57□□□□□ -0.72
CDK5RAP3-230ENST00000584042 LINC00337Q8N6G1 96 aa10.57□□□□□ -0.72
CDK5RAP3-230ENST00000584042 PLAC8Q9NZF1 115 aa10.57□□□□□ -0.72
CDK5RAP3-230ENST00000584042 TRAV13-2A0A0B4J235 113 aa10.56□□□□□ -0.72
CDK5RAP3-230ENST00000584042 BATFQ16520 125 aa10.55□□□□□ -0.72
CDK5RAP3-230ENST00000584042 MRPL55Q7Z7F7 128 aaKnown RBP10.55□□□□□ -0.72
CDK5RAP3-230ENST00000584042 RAB37Q96AX2 223 aa10.55□□□□□ -0.72
CDK5RAP3-230ENST00000584042 SNHG12Q9BXW3 62 aa10.55□□□□□ -0.72
CDK5RAP3-230ENST00000584042 FAM30AQ9NZY2 134 aa10.55□□□□□ -0.72
CDK5RAP3-230ENST00000584042 C22orf24Q9Y442 160 aa10.55□□□□□ -0.72
CDK5RAP3-230ENST00000584042 PRR3P79522 188 aaKnown RBP10.54□□□□□ -0.72
CDK5RAP3-230ENST00000584042 C7orf33Q8WU49 177 aa10.54□□□□□ -0.72
CDK5RAP3-230ENST00000584042 DPH3Q96FX2 82 aa10.53□□□□□ -0.72
CDK5RAP3-230ENST00000584042 K7ERJ3 54 aa10.52□□□□□ -0.73
CDK5RAP3-230ENST00000584042 IGLV6-57P01721 117 aa10.52□□□□□ -0.73
CDK5RAP3-230ENST00000584042 RPL13AP40429 203 aaKnown RBP10.52□□□□□ -0.73
CDK5RAP3-230ENST00000584042 LBHQ53QV2 105 aaPredicted RBP10.52□□□□□ -0.73
CDK5RAP3-230ENST00000584042 S100A7L2Q5SY68 101 aa10.52□□□□□ -0.73
CDK5RAP3-230ENST00000584042 SCXQ7RTU7 201 aa10.52□□□□□ -0.73
CDK5RAP3-230ENST00000584042 TMEM126AQ9H061 195 aa10.52□□□□□ -0.73
CDK5RAP3-230ENST00000584042 PRO1854Q9UHT4 67 aa10.52□□□□□ -0.73
CDK5RAP3-230ENST00000584042 APOBP04114 4563 aaKnown RBP10.51□□□□□ -0.73
CDK5RAP3-230ENST00000584042 TRBV10-3A0A0K0K1G6 114 aa10.5□□□□□ -0.73
CDK5RAP3-230ENST00000584042 OR13C6PQ8NH95 151 aa10.5□□□□□ -0.73
CDK5RAP3-230ENST00000584042 CIRBP-AS1Q8TBR5 109 aa10.5□□□□□ -0.73
CDK5RAP3-230ENST00000584042 LINC00167Q96N53 147 aa10.5□□□□□ -0.73
CDK5RAP3-230ENST00000584042 CBY1Q9Y3M2 126 aa10.5□□□□□ -0.73
CDK5RAP3-230ENST00000584042 PHF5AQ7RTV0 110 aaKnown RBP10.49□□□□□ -0.73
CDK5RAP3-230ENST00000584042 GAGE10A6NGK3 116 aa10.48□□□□□ -0.73
CDK5RAP3-230ENST00000584042 IGLV1-50A0A075B6I6 118 aa10.47□□□□□ -0.73
CDK5RAP3-230ENST00000584042 PRYO14603 147 aa10.47□□□□□ -0.73
CDK5RAP3-230ENST00000584042 TRAV23DV6A0A075B6W5 121 aa10.46□□□□□ -0.73
CDK5RAP3-230ENST00000584042 UBE2BP63146 152 aa10.46□□□□□ -0.73
CDK5RAP3-230ENST00000584042 COL5A1-AS1Q5SY13 56 aa10.46□□□□□ -0.73
CDK5RAP3-230ENST00000584042 KCNQ1DNQ9H478 68 aa10.46□□□□□ -0.73
CDK5RAP3-230ENST00000584042 Q1RN00 199 aa10.45□□□□□ -0.74
CDK5RAP3-230ENST00000584042 RPL37AP8A6NKH3 93 aa10.44□□□□□ -0.74
CDK5RAP3-230ENST00000584042 TSPAN13O95857 204 aa10.44□□□□□ -0.74
CDK5RAP3-230ENST00000584042 H7C2G1 150 aa10.43□□□□□ -0.74
CDK5RAP3-230ENST00000584042 RPL28P46779 137 aaKnown RBP10.43□□□□□ -0.74
CDK5RAP3-230ENST00000584042 SMIM11BQ8TCY0 68 aa10.43□□□□□ -0.74
CDK5RAP3-230ENST00000584042 HAMPP81172 84 aa10.42□□□□□ -0.74
CDK5RAP3-230ENST00000584042 TAX1BP3O14907 124 aa10.41□□□□□ -0.74
CDK5RAP3-230ENST00000584042 ZNF73O43830 326 aaPredicted RBP10.41□□□□□ -0.74
CDK5RAP3-230ENST00000584042 SPRR1AP35321 89 aa10.41□□□□□ -0.74
CDK5RAP3-230ENST00000584042 XGP55808 180 aa10.41□□□□□ -0.74
CDK5RAP3-230ENST00000584042 DIRC1Q969H9 104 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms