RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 ADAMTSL4-AS1Q5T5F5 129 aa7.47□□□□□ -1.21
CDRT1-207ENST00000583965 Q6ZRP5 223 aa7.47□□□□□ -1.21
CDRT1-207ENST00000583965 COPS9Q8WXC6 57 aa7.47□□□□□ -1.21
CDRT1-207ENST00000583965 A0A096LNI7 61 aa7.46□□□□□ -1.22
CDRT1-207ENST00000583965 LINC00158P58513 81 aa7.46□□□□□ -1.22
CDRT1-207ENST00000583965 KRTAP10-1P60331 282 aa7.46□□□□□ -1.22
CDRT1-207ENST00000583965 GAGE2BQ13066 116 aa7.46□□□□□ -1.22
CDRT1-207ENST00000583965 SMIM13P0DJ93 91 aa7.45□□□□□ -1.22
CDRT1-207ENST00000583965 RPL24P83731 157 aaKnown RBP7.45□□□□□ -1.22
CDRT1-207ENST00000583965 Q6ZSA8 131 aa7.45□□□□□ -1.22
CDRT1-207ENST00000583965 IGKV2-24A0A0C4DH68 120 aa7.44□□□□□ -1.22
CDRT1-207ENST00000583965 GAGE2EQ4V326 116 aa7.44□□□□□ -1.22
CDRT1-207ENST00000583965 MUSTN1Q8IVN3 82 aa7.44□□□□□ -1.22
CDRT1-207ENST00000583965 SPACA4Q8TDM5 124 aa7.44□□□□□ -1.22
CDRT1-207ENST00000583965 GAGE2DQ9UEU5 116 aa7.44□□□□□ -1.22
CDRT1-207ENST00000583965 TAX1BP3O14907 124 aa7.43□□□□□ -1.22
CDRT1-207ENST00000583965 LINC00308Q8TCZ7 52 aa7.43□□□□□ -1.22
CDRT1-207ENST00000583965 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.43□□□□□ -1.22
CDRT1-207ENST00000583965 LOC107984156A0A0G2JMH3 177 aa7.42□□□□□ -1.22
CDRT1-207ENST00000583965 A0A0U1RRA0 63 aa7.42□□□□□ -1.22
CDRT1-207ENST00000583965 CHTF8P0CG12 524 aa7.42□□□□□ -1.22
CDRT1-207ENST00000583965 ARL17AQ8IVW1 177 aa7.42□□□□□ -1.22
CDRT1-207ENST00000583965 MIR7-3HGQ8N6C7 128 aa7.42□□□□□ -1.22
CDRT1-207ENST00000583965 SND1-IT1Q9HBX3 110 aa7.42□□□□□ -1.22
CDRT1-207ENST00000583965 NHP2Q9NX24 153 aaKnown RBP7.42□□□□□ -1.22
CDRT1-207ENST00000583965 DYNC1H1Q14204 4646 aaKnown RBP7.41□□□□□ -1.22
CDRT1-207ENST00000583965 A0A0B4J2C4 111 aa7.41□□□□□ -1.22
CDRT1-207ENST00000583965 A4D1N5 150 aa7.41□□□□□ -1.22
CDRT1-207ENST00000583965 PANO1I0J062 215 aa7.41□□□□□ -1.22
CDRT1-207ENST00000583965 C9orf129Q5T035 196 aaKnown RBP7.41□□□□□ -1.22
CDRT1-207ENST00000583965 DPH3Q96FX2 82 aa7.41□□□□□ -1.22
CDRT1-207ENST00000583965 XAGE1AQ9HD64 81 aa7.41□□□□□ -1.22
CDRT1-207ENST00000583965 FAM30AQ9NZY2 134 aa7.41□□□□□ -1.22
CDRT1-207ENST00000583965 CFC1BP0CG36 223 aa7.4□□□□□ -1.22
CDRT1-207ENST00000583965 CFC1P0CG37 223 aa7.4□□□□□ -1.22
CDRT1-207ENST00000583965 SOSTDC1Q6X4U4 206 aa7.4□□□□□ -1.22
CDRT1-207ENST00000583965 PLA2G2DQ9UNK4 145 aa7.4□□□□□ -1.22
CDRT1-207ENST00000583965 LRP1BQ9NZR2 4599 aa7.4□□□□□ -1.23
CDRT1-207ENST00000583965 DNAH8Q96JB1 4490 aa7.39□□□□□ -1.23
CDRT1-207ENST00000583965 A0A087WYN8 130 aa7.39□□□□□ -1.23
CDRT1-207ENST00000583965 C9orf118A6NHY6 69 aa7.39□□□□□ -1.23
CDRT1-207ENST00000583965 EPM2AB3EWF7 344 aa7.39□□□□□ -1.23
CDRT1-207ENST00000583965 DAND5Q8N907 189 aa7.39□□□□□ -1.23
CDRT1-207ENST00000583965 PLAC8Q9NZF1 115 aa7.39□□□□□ -1.23
CDRT1-207ENST00000583965 K7ERJ3 54 aa7.38□□□□□ -1.23
CDRT1-207ENST00000583965 EIF4EBP3O60516 100 aaPredicted RBP7.38□□□□□ -1.23
CDRT1-207ENST00000583965 EPPK1P58107 5090 aaKnown RBP7.37□□□□□ -1.23
CDRT1-207ENST00000583965 CDK2AP2O75956 126 aa7.37□□□□□ -1.23
CDRT1-207ENST00000583965 SCXQ7RTU7 201 aa7.37□□□□□ -1.23
CDRT1-207ENST00000583965 CIRBP-AS1Q8TBR5 109 aa7.37□□□□□ -1.23
CDRT1-207ENST00000583965 IGLV5-37A0A075B6J1 123 aa7.36□□□□□ -1.23
CDRT1-207ENST00000583965 A0A1B0GV90 55 aa7.36□□□□□ -1.23
CDRT1-207ENST00000583965 A0A1W2PNN7 141 aa7.36□□□□□ -1.23
CDRT1-207ENST00000583965 FAM168BA1KXE4 195 aa7.36□□□□□ -1.23
CDRT1-207ENST00000583965 PRO1854Q9UHT4 67 aa7.36□□□□□ -1.23
CDRT1-207ENST00000583965 NDUFC2O95298 119 aa7.35□□□□□ -1.23
CDRT1-207ENST00000583965 VPREB1P12018 145 aa7.35□□□□□ -1.23
CDRT1-207ENST00000583965 XGP55808 180 aa7.35□□□□□ -1.23
CDRT1-207ENST00000583965 NPC2P61916 151 aa7.35□□□□□ -1.23
CDRT1-207ENST00000583965 FAM19A5Q7Z5A7 132 aaPredicted RBP7.35□□□□□ -1.23
CDRT1-207ENST00000583965 RAB37Q96AX2 223 aa7.35□□□□□ -1.23
CDRT1-207ENST00000583965 M0QXV9 152 aa7.34□□□□□ -1.23
CDRT1-207ENST00000583965 SERTAD4-AS1Q5TG53 156 aa7.34□□□□□ -1.23
CDRT1-207ENST00000583965 KRTAP7-1Q8IUC3 87 aa7.34□□□□□ -1.23
CDRT1-207ENST00000583965 NKAPP1Q8N9T2 125 aa7.34□□□□□ -1.23
CDRT1-207ENST00000583965 TSPAN13O95857 204 aa7.33□□□□□ -1.24
CDRT1-207ENST00000583965 C22orf24Q9Y442 160 aa7.33□□□□□ -1.24
CDRT1-207ENST00000583965 APOBP04114 4563 aaKnown RBP7.32□□□□□ -1.24
CDRT1-207ENST00000583965 TRBV10-2A0A0K0K1G8 114 aa7.32□□□□□ -1.24
CDRT1-207ENST00000583965 A0A1W2PPM0 123 aa7.32□□□□□ -1.24
CDRT1-207ENST00000583965 H3BUT2 72 aa7.32□□□□□ -1.24
CDRT1-207ENST00000583965 MRPL55Q7Z7F7 128 aaKnown RBP7.32□□□□□ -1.24
CDRT1-207ENST00000583965 IGKV2-28A0A075B6P5 120 aa7.31□□□□□ -1.24
CDRT1-207ENST00000583965 TRAV13-2A0A0B4J235 113 aa7.31□□□□□ -1.24
CDRT1-207ENST00000583965 M0R378 163 aa7.31□□□□□ -1.24
CDRT1-207ENST00000583965 IGKV2D-28P01615 120 aa7.31□□□□□ -1.24
CDRT1-207ENST00000583965 HAMPP81172 84 aa7.31□□□□□ -1.24
CDRT1-207ENST00000583965 Q8NDZ9 215 aa7.31□□□□□ -1.24
CDRT1-207ENST00000583965 C7orf33Q8WU49 177 aa7.31□□□□□ -1.24
CDRT1-207ENST00000583965 FABP2P12104 132 aa7.3□□□□□ -1.24
CDRT1-207ENST00000583965 PHF5AQ7RTV0 110 aaKnown RBP7.3□□□□□ -1.24
CDRT1-207ENST00000583965 NCR3O14931 201 aa7.29□□□□□ -1.24
CDRT1-207ENST00000583965 RPL13AP40429 203 aaKnown RBP7.29□□□□□ -1.24
CDRT1-207ENST00000583965 LYRM7Q5U5X0 104 aa7.29□□□□□ -1.24
CDRT1-207ENST00000583965 LINC00167Q96N53 147 aa7.29□□□□□ -1.24
CDRT1-207ENST00000583965 UBE2BP63146 152 aa7.28□□□□□ -1.24
CDRT1-207ENST00000583965 PRR3P79522 188 aaKnown RBP7.28□□□□□ -1.24
CDRT1-207ENST00000583965 VAMP3Q15836 100 aa7.28□□□□□ -1.24
CDRT1-207ENST00000583965 LINC00337Q8N6G1 96 aa7.28□□□□□ -1.24
CDRT1-207ENST00000583965 NAA38Q9BRA0 125 aaKnown RBP7.27□□□□□ -1.25
CDRT1-207ENST00000583965 IGLV1-50A0A075B6I6 118 aa7.26□□□□□ -1.25
CDRT1-207ENST00000583965 GAGE10A6NGK3 116 aa7.26□□□□□ -1.25
CDRT1-207ENST00000583965 K7EP34 96 aa7.26□□□□□ -1.25
CDRT1-207ENST00000583965 UBE2V1Q13404 147 aa7.26□□□□□ -1.25
CDRT1-207ENST00000583965 Q1RN00 199 aa7.26□□□□□ -1.25
CDRT1-207ENST00000583965 S100A7L2Q5SY68 101 aa7.26□□□□□ -1.25
CDRT1-207ENST00000583965 GTF2H5Q6ZYL4 71 aa7.26□□□□□ -1.25
CDRT1-207ENST00000583965 CBY1Q9Y3M2 126 aa7.26□□□□□ -1.25
CDRT1-207ENST00000583965 SPCS1Q9Y6A9 102 aa7.26□□□□□ -1.25
CDRT1-207ENST00000583965 HSPG2P98160 4391 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms