RNA–Protein interactions for RNA: ENST00000583902.1

CASC3-209, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-209ENST00000583902 IGLV5-52A0A0A0MRZ9 124 aa5.96□□□□□ -1.46
CASC3-209ENST00000583902 TRBV10-2A0A0K0K1G8 114 aa5.96□□□□□ -1.46
CASC3-209ENST00000583902 MUSTN1Q8IVN3 82 aa5.96□□□□□ -1.46
CASC3-209ENST00000583902 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.95□□□□□ -1.46
CASC3-209ENST00000583902 TRAV13-2A0A0B4J235 113 aa5.95□□□□□ -1.46
CASC3-209ENST00000583902 A0A0B4J2C4 111 aa5.95□□□□□ -1.46
CASC3-209ENST00000583902 C9orf116Q5BN46 136 aaPredicted RBP5.95□□□□□ -1.46
CASC3-209ENST00000583902 BVES-AS1Q5T3Y7 98 aa5.95□□□□□ -1.46
CASC3-209ENST00000583902 A0A1B0GWB2 263 aa5.94□□□□□ -1.46
CASC3-209ENST00000583902 RPL18AQ02543 176 aaKnown RBP5.94□□□□□ -1.46
CASC3-209ENST00000583902 SDIM1Q6ZPB5 146 aa5.94□□□□□ -1.46
CASC3-209ENST00000583902 Q6ZRP5 223 aa5.94□□□□□ -1.46
CASC3-209ENST00000583902 IGLV5-37A0A075B6J1 123 aa5.93□□□□□ -1.46
CASC3-209ENST00000583902 A0A0U1RRA0 63 aa5.93□□□□□ -1.46
CASC3-209ENST00000583902 A4D1N5 150 aa5.93□□□□□ -1.46
CASC3-209ENST00000583902 PCP4L1A6NKN8 68 aa5.93□□□□□ -1.46
CASC3-209ENST00000583902 GAGE2EQ4V326 116 aa5.93□□□□□ -1.46
CASC3-209ENST00000583902 GAGE2DQ9UEU5 116 aa5.93□□□□□ -1.46
CASC3-209ENST00000583902 ALMS1Q8TCU4 4167 aa5.93□□□□□ -1.46
CASC3-209ENST00000583902 VPS13DQ5THJ4 4388 aa5.92□□□□□ -1.46
CASC3-209ENST00000583902 GAGE2BQ13066 116 aa5.92□□□□□ -1.46
CASC3-209ENST00000583902 DAND5Q8N907 189 aa5.92□□□□□ -1.46
CASC3-209ENST00000583902 RAB37Q96AX2 223 aa5.92□□□□□ -1.46
CASC3-209ENST00000583902 TMEM126AQ9H061 195 aa5.92□□□□□ -1.46
CASC3-209ENST00000583902 LYSTQ99698 3801 aa5.92□□□□□ -1.46
CASC3-209ENST00000583902 HINT1P49773 126 aaPredicted RBP5.91□□□□□ -1.46
CASC3-209ENST00000583902 FXYD2P54710 66 aa5.91□□□□□ -1.46
CASC3-209ENST00000583902 COL5A1-AS1Q5SY13 56 aa5.91□□□□□ -1.46
CASC3-209ENST00000583902 SOSTDC1Q6X4U4 206 aa5.91□□□□□ -1.46
CASC3-209ENST00000583902 NKAPP1Q8N9T2 125 aa5.91□□□□□ -1.46
CASC3-209ENST00000583902 PRO1854Q9UHT4 67 aa5.91□□□□□ -1.46
CASC3-209ENST00000583902 EPM2AB3EWF7 344 aa5.9□□□□□ -1.46
CASC3-209ENST00000583902 M0R378 163 aa5.9□□□□□ -1.46
CASC3-209ENST00000583902 C9orf129Q5T035 196 aaKnown RBP5.9□□□□□ -1.46
CASC3-209ENST00000583902 XAGE1AQ9HD64 81 aa5.9□□□□□ -1.46
CASC3-209ENST00000583902 A0A096LNI7 61 aa5.89□□□□□ -1.47
CASC3-209ENST00000583902 CFC1BP0CG36 223 aa5.89□□□□□ -1.47
CASC3-209ENST00000583902 CFC1P0CG37 223 aa5.89□□□□□ -1.47
CASC3-209ENST00000583902 VPREB1P12018 145 aa5.89□□□□□ -1.47
CASC3-209ENST00000583902 LYRM7Q5U5X0 104 aa5.89□□□□□ -1.47
CASC3-209ENST00000583902 SPACA4Q8TDM5 124 aa5.89□□□□□ -1.47
CASC3-209ENST00000583902 NHP2Q9NX24 153 aaKnown RBP5.89□□□□□ -1.47
CASC3-209ENST00000583902 DNAH6Q9C0G6 4158 aa5.89□□□□□ -1.47
CASC3-209ENST00000583902 NPC2P61916 151 aa5.88□□□□□ -1.47
CASC3-209ENST00000583902 S100A7L2Q5SY68 101 aa5.88□□□□□ -1.47
CASC3-209ENST00000583902 SNHG12Q9BXW3 62 aa5.88□□□□□ -1.47
CASC3-209ENST00000583902 KMT2AQ03164 3969 aa5.88□□□□□ -1.47
CASC3-209ENST00000583902 A0A1B0GVY2 172 aa5.87□□□□□ -1.47
CASC3-209ENST00000583902 IGLV6-57P01721 117 aa5.87□□□□□ -1.47
CASC3-209ENST00000583902 COX6CP09669 75 aa5.87□□□□□ -1.47
CASC3-209ENST00000583902 DPH3Q96FX2 82 aa5.87□□□□□ -1.47
CASC3-209ENST00000583902 KRTAP9-9Q9BYP9 154 aa5.87□□□□□ -1.47
CASC3-209ENST00000583902 KRTAP9-4Q9BYQ2 154 aa5.87□□□□□ -1.47
CASC3-209ENST00000583902 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.87□□□□□ -1.47
CASC3-209ENST00000583902 DNAH1Q9P2D7 4330 aa5.87□□□□□ -1.47
CASC3-209ENST00000583902 IGKV2-28A0A075B6P5 120 aa5.86□□□□□ -1.47
CASC3-209ENST00000583902 IGKV2-24A0A0C4DH68 120 aa5.86□□□□□ -1.47
CASC3-209ENST00000583902 IGKV2D-28P01615 120 aa5.86□□□□□ -1.47
CASC3-209ENST00000583902 KRTAP10-2P60368 255 aa5.86□□□□□ -1.47
CASC3-209ENST00000583902 BATFQ16520 125 aa5.86□□□□□ -1.47
CASC3-209ENST00000583902 Q6ZSA8 131 aa5.86□□□□□ -1.47
CASC3-209ENST00000583902 MRPL55Q7Z7F7 128 aaKnown RBP5.86□□□□□ -1.47
CASC3-209ENST00000583902 PLAC8Q9NZF1 115 aa5.86□□□□□ -1.47
CASC3-209ENST00000583902 TRBV7-6A0A0J9YX20 115 aa5.85□□□□□ -1.47
CASC3-209ENST00000583902 SNCGO76070 127 aa5.85□□□□□ -1.47
CASC3-209ENST00000583902 RPL28P46779 137 aaKnown RBP5.85□□□□□ -1.47
CASC3-209ENST00000583902 VAMP3Q15836 100 aa5.85□□□□□ -1.47
CASC3-209ENST00000583902 LINC00337Q8N6G1 96 aa5.85□□□□□ -1.47
CASC3-209ENST00000583902 OR13C6PQ8NH95 151 aa5.85□□□□□ -1.47
CASC3-209ENST00000583902 KCNQ1DNQ9H478 68 aa5.85□□□□□ -1.47
CASC3-209ENST00000583902 C22orf24Q9Y442 160 aa5.85□□□□□ -1.47
CASC3-209ENST00000583902 H0YGX0 51 aa5.84□□□□□ -1.47
CASC3-209ENST00000583902 M0QXV9 152 aa5.84□□□□□ -1.47
CASC3-209ENST00000583902 PRYO14603 147 aa5.84□□□□□ -1.47
CASC3-209ENST00000583902 RPL13AP40429 203 aaKnown RBP5.84□□□□□ -1.47
CASC3-209ENST00000583902 Q1RN00 199 aa5.84□□□□□ -1.47
CASC3-209ENST00000583902 IGLV1-50A0A075B6I6 118 aa5.83□□□□□ -1.48
CASC3-209ENST00000583902 C9orf118A6NHY6 69 aa5.83□□□□□ -1.48
CASC3-209ENST00000583902 KRTAP19-4Q3LI73 84 aa5.83□□□□□ -1.48
CASC3-209ENST00000583902 TRBV20-1A0A075B6N2 111 aa5.82□□□□□ -1.48
CASC3-209ENST00000583902 TRAV23DV6A0A075B6W5 121 aa5.82□□□□□ -1.48
CASC3-209ENST00000583902 A0A087WYN8 130 aa5.82□□□□□ -1.48
CASC3-209ENST00000583902 TRBV10-3A0A0K0K1G6 114 aa5.82□□□□□ -1.48
CASC3-209ENST00000583902 A0A1B0GX51 115 aa5.82□□□□□ -1.48
CASC3-209ENST00000583902 H3BS24 57 aa5.82□□□□□ -1.48
CASC3-209ENST00000583902 NCR3O14931 201 aa5.82□□□□□ -1.48
CASC3-209ENST00000583902 SERTAD4-AS1Q5TG53 156 aa5.82□□□□□ -1.48
CASC3-209ENST00000583902 FAM19A5Q7Z5A7 132 aaPredicted RBP5.82□□□□□ -1.48
CASC3-209ENST00000583902 C7orf33Q8WU49 177 aa5.82□□□□□ -1.48
CASC3-209ENST00000583902 LINC00167Q96N53 147 aa5.82□□□□□ -1.48
CASC3-209ENST00000583902 A0A1W2PNN7 141 aa5.81□□□□□ -1.48
CASC3-209ENST00000583902 TAX1BP3O14907 124 aa5.81□□□□□ -1.48
CASC3-209ENST00000583902 DIRC1Q969H9 104 aa5.81□□□□□ -1.48
CASC3-209ENST00000583902 FAM168BA1KXE4 195 aa5.8□□□□□ -1.48
CASC3-209ENST00000583902 K7ERJ3 54 aa5.8□□□□□ -1.48
CASC3-209ENST00000583902 ZNF73O43830 326 aaPredicted RBP5.8□□□□□ -1.48
CASC3-209ENST00000583902 TSPAN13O95857 204 aa5.8□□□□□ -1.48
CASC3-209ENST00000583902 CHTF8P0CG12 524 aa5.8□□□□□ -1.48
CASC3-209ENST00000583902 INAFM2P0DMQ5 153 aa5.8□□□□□ -1.48
CASC3-209ENST00000583902 FABP2P12104 132 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 294 ms