RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 CDC42SE2Q9NRR3 84 aa3.21□□□□□ -1.9
VAPA-207ENST00000583879 TRAV1-1A0A0B4J248 108 aa3.2□□□□□ -1.9
VAPA-207ENST00000583879 SDHAF1A6NFY7 115 aa3.2□□□□□ -1.9
VAPA-207ENST00000583879 H0Y9J4 135 aa3.2□□□□□ -1.9
VAPA-207ENST00000583879 NDUFS5O43920 106 aa3.2□□□□□ -1.9
VAPA-207ENST00000583879 SPINK8P0C7L1 97 aa3.2□□□□□ -1.9
VAPA-207ENST00000583879 PSMB2P49721 201 aa3.2□□□□□ -1.9
VAPA-207ENST00000583879 FOXA3P55318 350 aaPredicted RBP3.2□□□□□ -1.9
VAPA-207ENST00000583879 CAMK2N2Q96S95 79 aa3.2□□□□□ -1.9
VAPA-207ENST00000583879 OPRPNQ99935 248 aaPredicted RBP3.2□□□□□ -1.9
VAPA-207ENST00000583879 RBM12B-AS1Q9P1G2 102 aa3.2□□□□□ -1.9
VAPA-207ENST00000583879 TRBV20OR9-2A0A075B6H5 130 aa3.19□□□□□ -1.9
VAPA-207ENST00000583879 TRBV6-5A0A0K0K1A5 114 aa3.19□□□□□ -1.9
VAPA-207ENST00000583879 IFITM10A6NMD0 228 aa3.19□□□□□ -1.9
VAPA-207ENST00000583879 COX7A2LO14548 114 aa3.19□□□□□ -1.9
VAPA-207ENST00000583879 KRTAP1-4P0C5Y4 121 aa3.19□□□□□ -1.9
VAPA-207ENST00000583879 LINC00242Q5T6M2 205 aa3.19□□□□□ -1.9
VAPA-207ENST00000583879 NOTCH2NLQ7Z3S9 236 aa3.19□□□□□ -1.9
VAPA-207ENST00000583879 KRTAP11-1Q8IUC1 163 aa3.19□□□□□ -1.9
VAPA-207ENST00000583879 HIST3H2BBQ8N257 126 aa3.19□□□□□ -1.9
VAPA-207ENST00000583879 TSKUQ8WUA8 353 aa3.19□□□□□ -1.9
VAPA-207ENST00000583879 IMUPQ9GZP8 106 aa3.19□□□□□ -1.9
VAPA-207ENST00000583879 EIF5A2Q9GZV4 153 aaKnown RBP3.19□□□□□ -1.9
VAPA-207ENST00000583879 MANBALQ9NQG1 85 aa3.19□□□□□ -1.9
VAPA-207ENST00000583879 GNG13Q9P2W3 67 aa3.19□□□□□ -1.9
VAPA-207ENST00000583879 CCDC179H3BU77 68 aa3.18□□□□□ -1.9
VAPA-207ENST00000583879 TSHBP01222 138 aa3.18□□□□□ -1.9
VAPA-207ENST00000583879 UBE2D1P51668 147 aa3.18□□□□□ -1.9
VAPA-207ENST00000583879 POLR2KP53803 58 aaKnown RBP3.18□□□□□ -1.9
VAPA-207ENST00000583879 NDUFV3P56181 108 aaKnown RBP3.18□□□□□ -1.9
VAPA-207ENST00000583879 ZNF345Q14585 488 aa3.18□□□□□ -1.9
VAPA-207ENST00000583879 C5orf38Q86SI9 138 aa3.18□□□□□ -1.9
VAPA-207ENST00000583879 PRR15Q8IV56 129 aa3.18□□□□□ -1.9
VAPA-207ENST00000583879 NAA38Q9BRA0 125 aaKnown RBP3.18□□□□□ -1.9
VAPA-207ENST00000583879 VAMP8Q9BV40 100 aa3.18□□□□□ -1.9
VAPA-207ENST00000583879 ST20Q9HBF5 79 aa3.18□□□□□ -1.9
VAPA-207ENST00000583879 TRAV13-1A0A0B4J241 112 aa3.17□□□□□ -1.9
VAPA-207ENST00000583879 TRBV27A0A0K0K1C4 114 aa3.17□□□□□ -1.9
VAPA-207ENST00000583879 FAM168BA1KXE4 195 aa3.17□□□□□ -1.9
VAPA-207ENST00000583879 E9PLD3 99 aa3.17□□□□□ -1.9
VAPA-207ENST00000583879 IFITM1P13164 125 aa3.17□□□□□ -1.9
VAPA-207ENST00000583879 ALKAL2Q6UX46 152 aa3.17□□□□□ -1.9
VAPA-207ENST00000583879 ATP5L2Q7Z4Y8 100 aa3.17□□□□□ -1.9
VAPA-207ENST00000583879 IMMP2LQ96T52 175 aa3.17□□□□□ -1.9
VAPA-207ENST00000583879 RPP21Q9H633 154 aaKnown RBP3.17□□□□□ -1.9
VAPA-207ENST00000583879 TMEM242Q9NWH2 141 aa3.17□□□□□ -1.9
VAPA-207ENST00000583879 MRPL35Q9NZE8 188 aaKnown RBP3.17□□□□□ -1.9
VAPA-207ENST00000583879 FAT4Q6V0I7 4981 aa3.17□□□□□ -1.9
VAPA-207ENST00000583879 KANTRA0A1W2PQU2 76 aa3.16□□□□□ -1.9
VAPA-207ENST00000583879 C7orf77A4D0Y5 90 aa3.16□□□□□ -1.9
VAPA-207ENST00000583879 HMSDA8MTL9 139 aa3.16□□□□□ -1.9
VAPA-207ENST00000583879 TLX1NBP0CAT3 122 aa3.16□□□□□ -1.9
VAPA-207ENST00000583879 SPAG11BQ08648 103 aa3.16□□□□□ -1.9
VAPA-207ENST00000583879 KRTAP7-1Q8IUC3 87 aa3.16□□□□□ -1.9
VAPA-207ENST00000583879 SEC11CQ9BY50 192 aa3.16□□□□□ -1.9
VAPA-207ENST00000583879 UBE2D4Q9Y2X8 147 aa3.16□□□□□ -1.9
VAPA-207ENST00000583879 PYGO1Q9Y3Y4 419 aa3.16□□□□□ -1.9
VAPA-207ENST00000583879 IGLV9-49A0A0B4J1Y8 123 aa3.15□□□□□ -1.91
VAPA-207ENST00000583879 TRBV7-6A0A0J9YX20 115 aa3.15□□□□□ -1.91
VAPA-207ENST00000583879 A8MWL6 223 aa3.15□□□□□ -1.91
VAPA-207ENST00000583879 ZNF861PO60384 105 aa3.15□□□□□ -1.91
VAPA-207ENST00000583879 FCER1GP30273 86 aa3.15□□□□□ -1.91
VAPA-207ENST00000583879 TMEM258P61165 79 aa3.15□□□□□ -1.91
VAPA-207ENST00000583879 UBE2BP63146 152 aa3.15□□□□□ -1.91
VAPA-207ENST00000583879 RNASE13Q5GAN3 156 aaKnown RBP3.15□□□□□ -1.91
VAPA-207ENST00000583879 C10orf25Q5T742 122 aa3.15□□□□□ -1.91
VAPA-207ENST00000583879 UNQ6190/PRO20217Q6UXQ8 127 aa3.15□□□□□ -1.91
VAPA-207ENST00000583879 HIST1H4GQ99525 98 aa3.15□□□□□ -1.91
VAPA-207ENST00000583879 PSPHP1O15172 72 aa3.14□□□□□ -1.91
VAPA-207ENST00000583879 NDUFA1O15239 70 aa3.14□□□□□ -1.91
VAPA-207ENST00000583879 PPP1R17O96001 155 aa3.14□□□□□ -1.91
VAPA-207ENST00000583879 TRGC2P03986 189 aa3.14□□□□□ -1.91
VAPA-207ENST00000583879 HERVK_113P63121 156 aa3.14□□□□□ -1.91
VAPA-207ENST00000583879 MRPL54Q6P161 138 aaKnown RBP3.14□□□□□ -1.91
VAPA-207ENST00000583879 C3orf22Q8N5N4 141 aa3.14□□□□□ -1.91
VAPA-207ENST00000583879 HIST1H2BLQ99880 126 aa3.14□□□□□ -1.91
VAPA-207ENST00000583879 TIMM21Q9BVV7 248 aa3.14□□□□□ -1.91
VAPA-207ENST00000583879 SMDT1Q9H4I9 107 aa3.14□□□□□ -1.91
VAPA-207ENST00000583879 C6orf48Q9UBA6 75 aa3.14□□□□□ -1.91
VAPA-207ENST00000583879 UQCR10Q9UDW1 63 aa3.14□□□□□ -1.91
VAPA-207ENST00000583879 LOC389332A0A1B0GUA5 103 aa3.13□□□□□ -1.91
VAPA-207ENST00000583879 FAM236AA0A1B0GUQ0 79 aa3.13□□□□□ -1.91
VAPA-207ENST00000583879 A0A1B0GUT8 65 aa3.13□□□□□ -1.91
VAPA-207ENST00000583879 FAM236BA0A1B0GV22 79 aa3.13□□□□□ -1.91
VAPA-207ENST00000583879 IGKV2-30P06310 120 aa3.13□□□□□ -1.91
VAPA-207ENST00000583879 FABP4P15090 132 aa3.13□□□□□ -1.91
VAPA-207ENST00000583879 MP68P56378 58 aa3.13□□□□□ -1.91
VAPA-207ENST00000583879 Q6ZUT4 128 aa3.13□□□□□ -1.91
VAPA-207ENST00000583879 AMN1Q8IY45 258 aa3.13□□□□□ -1.91
VAPA-207ENST00000583879 FAM104AQ969W3 186 aa3.13□□□□□ -1.91
VAPA-207ENST00000583879 HIGD1CA8MV81 97 aa3.12□□□□□ -1.91
VAPA-207ENST00000583879 UQCRQO14949 82 aa3.12□□□□□ -1.91
VAPA-207ENST00000583879 CRYGAP11844 174 aa3.12□□□□□ -1.91
VAPA-207ENST00000583879 KIAA0087Q14695 138 aa3.12□□□□□ -1.91
VAPA-207ENST00000583879 C6orf99Q4VX62 202 aa3.12□□□□□ -1.91
VAPA-207ENST00000583879 COA6Q5JTJ3 125 aaKnown RBP3.12□□□□□ -1.91
VAPA-207ENST00000583879 C9orf129Q5T035 196 aaKnown RBP3.12□□□□□ -1.91
VAPA-207ENST00000583879 TEX43Q6ZNM6 134 aa3.12□□□□□ -1.91
VAPA-207ENST00000583879 FAM19A3Q7Z5A8 133 aa3.12□□□□□ -1.91
VAPA-207ENST00000583879 KTN1-AS1Q86SY8 53 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms