RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 Q6ZN92 141 aa4.55□□□□□ -1.68
SMCHD1-210ENST00000583800 TMEM136Q6ZRR5 245 aa4.55□□□□□ -1.68
SMCHD1-210ENST00000583800 MRPL55Q7Z7F7 128 aaKnown RBP4.55□□□□□ -1.68
SMCHD1-210ENST00000583800 Q8IZM0 81 aa4.55□□□□□ -1.68
SMCHD1-210ENST00000583800 ORMDL3Q8N138 153 aa4.55□□□□□ -1.68
SMCHD1-210ENST00000583800 PRELID3AQ96N28 172 aa4.55□□□□□ -1.68
SMCHD1-210ENST00000583800 C2orf88Q9BSF0 95 aa4.55□□□□□ -1.68
SMCHD1-210ENST00000583800 ANAPC11Q9NYG5 84 aa4.55□□□□□ -1.68
SMCHD1-210ENST00000583800 LOC389332A0A1B0GUA5 103 aa4.54□□□□□ -1.68
SMCHD1-210ENST00000583800 RPL37AP8A6NKH3 93 aa4.54□□□□□ -1.68
SMCHD1-210ENST00000583800 BCE1O60756 84 aa4.54□□□□□ -1.68
SMCHD1-210ENST00000583800 KRTAP13-2Q52LG2 175 aa4.54□□□□□ -1.68
SMCHD1-210ENST00000583800 C2orf66Q6UXQ4 117 aa4.54□□□□□ -1.68
SMCHD1-210ENST00000583800 AMELXQ99217 191 aa4.54□□□□□ -1.68
SMCHD1-210ENST00000583800 TP73-AS1Q9UF72 201 aa4.54□□□□□ -1.68
SMCHD1-210ENST00000583800 LINC00167Q96N53 147 aa4.53□□□□□ -1.68
SMCHD1-210ENST00000583800 CYSLTR1Q9Y271 337 aa4.53□□□□□ -1.68
SMCHD1-210ENST00000583800 V9GYY9 64 aa4.53□□□□□ -1.68
SMCHD1-210ENST00000583800 F8VRH5 84 aa4.52□□□□□ -1.69
SMCHD1-210ENST00000583800 FAM19A3Q7Z5A8 133 aa4.52□□□□□ -1.69
SMCHD1-210ENST00000583800 MAP1LC3AQ9H492 121 aa4.52□□□□□ -1.69
SMCHD1-210ENST00000583800 CDKN2A-AS1Q9UH64 79 aa4.52□□□□□ -1.69
SMCHD1-210ENST00000583800 IGIPA6NJ69 53 aa4.51□□□□□ -1.69
SMCHD1-210ENST00000583800 HERVK_113P63121 156 aa4.51□□□□□ -1.69
SMCHD1-210ENST00000583800 ATP5L2Q7Z4Y8 100 aa4.51□□□□□ -1.69
SMCHD1-210ENST00000583800 KRTAP13-1Q8IUC0 172 aa4.51□□□□□ -1.69
SMCHD1-210ENST00000583800 Q8N8P6 123 aa4.51□□□□□ -1.69
SMCHD1-210ENST00000583800 LINC00304Q8N9R0 145 aa4.51□□□□□ -1.69
SMCHD1-210ENST00000583800 CXCL5P42830 114 aa4.5□□□□□ -1.69
SMCHD1-210ENST00000583800 UBE2AP49459 152 aa4.5□□□□□ -1.69
SMCHD1-210ENST00000583800 PEA15Q15121 130 aa4.5□□□□□ -1.69
SMCHD1-210ENST00000583800 TPRXLQ17RH7 258 aa4.5□□□□□ -1.69
SMCHD1-210ENST00000583800 ORMDL2Q53FV1 153 aa4.5□□□□□ -1.69
SMCHD1-210ENST00000583800 LAMTOR2Q9Y2Q5 125 aa4.5□□□□□ -1.69
SMCHD1-210ENST00000583800 IGLV7-46A0A075B6I9 117 aa4.49□□□□□ -1.69
SMCHD1-210ENST00000583800 SCO1O75880 301 aa4.49□□□□□ -1.69
SMCHD1-210ENST00000583800 SEC11AP67812 179 aa4.49□□□□□ -1.69
SMCHD1-210ENST00000583800 FAM229BQ4G0N7 80 aa4.49□□□□□ -1.69
SMCHD1-210ENST00000583800 C5orf47Q569G3 176 aa4.49□□□□□ -1.69
SMCHD1-210ENST00000583800 NOTCH2NLQ7Z3S9 236 aa4.49□□□□□ -1.69
SMCHD1-210ENST00000583800 IGKV2-28A0A075B6P5 120 aa4.48□□□□□ -1.69
SMCHD1-210ENST00000583800 IGKV2D-28P01615 120 aa4.48□□□□□ -1.69
SMCHD1-210ENST00000583800 KRTAP10-7P60409 375 aaPredicted RBP4.48□□□□□ -1.69
SMCHD1-210ENST00000583800 RAB5BP61020 215 aa4.48□□□□□ -1.69
SMCHD1-210ENST00000583800 PRLHP81277 87 aa4.48□□□□□ -1.69
SMCHD1-210ENST00000583800 KRTAP5-11Q6L8G4 156 aa4.48□□□□□ -1.69
SMCHD1-210ENST00000583800 NKAPP1Q8N9T2 125 aa4.48□□□□□ -1.69
SMCHD1-210ENST00000583800 COX7B2Q8TF08 81 aa4.48□□□□□ -1.69
SMCHD1-210ENST00000583800 TIMM17AQ99595 171 aa4.48□□□□□ -1.69
SMCHD1-210ENST00000583800 FSIP2Q5CZC0 6907 aa4.47□□□□□ -1.69
SMCHD1-210ENST00000583800 IGKV2D-26A0A0A0MRZ7 120 aa4.47□□□□□ -1.69
SMCHD1-210ENST00000583800 PDZD11Q5EBL8 140 aa4.47□□□□□ -1.69
SMCHD1-210ENST00000583800 HIST1H4GQ99525 98 aa4.47□□□□□ -1.69
SMCHD1-210ENST00000583800 CBY1Q9Y3M2 126 aa4.47□□□□□ -1.69
SMCHD1-210ENST00000583800 K7EMI3 77 aa4.46□□□□□ -1.7
SMCHD1-210ENST00000583800 IGKV2-30P06310 120 aa4.46□□□□□ -1.7
SMCHD1-210ENST00000583800 SPINK8P0C7L1 97 aa4.46□□□□□ -1.7
SMCHD1-210ENST00000583800 FAM19A1Q7Z5A9 133 aa4.46□□□□□ -1.7
SMCHD1-210ENST00000583800 C3orf22Q8N5N4 141 aa4.46□□□□□ -1.7
SMCHD1-210ENST00000583800 Q8NBF4 154 aa4.46□□□□□ -1.7
SMCHD1-210ENST00000583800 TOMM6Q96B49 74 aa4.46□□□□□ -1.7
SMCHD1-210ENST00000583800 NXT2Q9NPJ8 142 aaKnown RBP4.46□□□□□ -1.7
SMCHD1-210ENST00000583800 TINCRA0A1B0GVN0 87 aa4.45□□□□□ -1.7
SMCHD1-210ENST00000583800 TMEM238C9JI98 176 aa4.45□□□□□ -1.7
SMCHD1-210ENST00000583800 ADCYAP1P18509 176 aa4.45□□□□□ -1.7
SMCHD1-210ENST00000583800 SCGB3A1Q96QR1 104 aa4.45□□□□□ -1.7
SMCHD1-210ENST00000583800 TMEM126AQ9H061 195 aa4.45□□□□□ -1.7
SMCHD1-210ENST00000583800 PFN2P35080 140 aa4.44□□□□□ -1.7
SMCHD1-210ENST00000583800 TAL2Q16559 108 aa4.44□□□□□ -1.7
SMCHD1-210ENST00000583800 CBLN2Q8IUK8 224 aa4.44□□□□□ -1.7
SMCHD1-210ENST00000583800 M0R378 163 aa4.43□□□□□ -1.7
SMCHD1-210ENST00000583800 MT-ND4LP03901 98 aa4.43□□□□□ -1.7
SMCHD1-210ENST00000583800 G0S2P27469 103 aa4.43□□□□□ -1.7
SMCHD1-210ENST00000583800 LCE1AQ5T7P2 110 aa4.43□□□□□ -1.7
SMCHD1-210ENST00000583800 BOD1L2Q8IYS8 172 aa4.43□□□□□ -1.7
SMCHD1-210ENST00000583800 PLEKHB2Q96CS7 222 aa4.43□□□□□ -1.7
SMCHD1-210ENST00000583800 Q8NDZ9 215 aa4.42□□□□□ -1.7
SMCHD1-210ENST00000583800 HIGD2AQ9BW72 106 aa4.42□□□□□ -1.7
SMCHD1-210ENST00000583800 CST9LQ9H4G1 147 aa4.42□□□□□ -1.7
SMCHD1-210ENST00000583800 A0A1B0GVG6 124 aa4.41□□□□□ -1.7
SMCHD1-210ENST00000583800 A6NDN8 102 aa4.41□□□□□ -1.7
SMCHD1-210ENST00000583800 FP248Q71RG6 208 aaPredicted RBP4.41□□□□□ -1.7
SMCHD1-210ENST00000583800 LITAFQ99732 161 aa4.41□□□□□ -1.7
SMCHD1-210ENST00000583800 KRTAP4-1Q9BYQ7 146 aa4.41□□□□□ -1.7
SMCHD1-210ENST00000583800 SND1-IT1Q9HBX3 110 aa4.41□□□□□ -1.7
SMCHD1-210ENST00000583800 DHRS4-AS1Q9P1J3 65 aa4.41□□□□□ -1.7
SMCHD1-210ENST00000583800 H3BRM9 83 aa4.4□□□□□ -1.71
SMCHD1-210ENST00000583800 RAB14P61106 215 aa4.4□□□□□ -1.71
SMCHD1-210ENST00000583800 PMVKQ15126 192 aa4.4□□□□□ -1.71
SMCHD1-210ENST00000583800 KRTAP13-3Q3SY46 172 aa4.4□□□□□ -1.71
SMCHD1-210ENST00000583800 SPAG11AQ6PDA7 123 aa4.4□□□□□ -1.71
SMCHD1-210ENST00000583800 LINC00337Q8N6G1 96 aa4.4□□□□□ -1.71
SMCHD1-210ENST00000583800 ZNF625Q96I27 306 aaPredicted RBP4.4□□□□□ -1.71
SMCHD1-210ENST00000583800 SPRR4Q96PI1 79 aa4.4□□□□□ -1.71
SMCHD1-210ENST00000583800 ERG28Q9UKR5 140 aa4.4□□□□□ -1.71
SMCHD1-210ENST00000583800 LINC01546A6NGU7 62 aa4.39□□□□□ -1.71
SMCHD1-210ENST00000583800 IGLC3P0DOY3 106 aa4.39□□□□□ -1.71
SMCHD1-210ENST00000583800 ZNF22P17026 224 aaPredicted RBP4.39□□□□□ -1.71
SMCHD1-210ENST00000583800 ASB16-AS1Q495Z4 193 aa4.39□□□□□ -1.71
SMCHD1-210ENST00000583800 DAND5Q8N907 189 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms