RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 HERVK_113P61574 105 aa8.2□□□□□ -1.1
SS18-222ENST00000582792 IGLV1-50A0A075B6I6 118 aa8.19□□□□□ -1.1
SS18-222ENST00000582792 C20orf202A1L168 122 aa8.19□□□□□ -1.1
SS18-222ENST00000582792 NDUFC2-KCTD14E9PQ53 114 aa8.19□□□□□ -1.1
SS18-222ENST00000582792 HIST1H2BLQ99880 126 aa8.19□□□□□ -1.1
SS18-222ENST00000582792 LEPROTO15243 131 aa8.18□□□□□ -1.1
SS18-222ENST00000582792 KRTDAPP60985 99 aa8.18□□□□□ -1.1
SS18-222ENST00000582792 SNRPEP62304 92 aaKnown RBP8.18□□□□□ -1.1
SS18-222ENST00000582792 PLEKHB2Q96CS7 222 aa8.18□□□□□ -1.1
SS18-222ENST00000582792 PMCHL2Q9BQD1 86 aa8.18□□□□□ -1.1
SS18-222ENST00000582792 KRTAP11-1Q8IUC1 163 aa8.17□□□□□ -1.1
SS18-222ENST00000582792 ZNF625Q96I27 306 aaPredicted RBP8.17□□□□□ -1.1
SS18-222ENST00000582792 KRTAP1-4P0C5Y4 121 aa8.16□□□□□ -1.1
SS18-222ENST00000582792 COX17Q14061 63 aa8.16□□□□□ -1.1
SS18-222ENST00000582792 FAM168BA1KXE4 195 aa8.15□□□□□ -1.1
SS18-222ENST00000582792 E9PLD3 99 aa8.15□□□□□ -1.1
SS18-222ENST00000582792 HERV-K104P63124 156 aa8.15□□□□□ -1.1
SS18-222ENST00000582792 PRR4Q16378 134 aa8.15□□□□□ -1.1
SS18-222ENST00000582792 KRTAP9-2Q9BYQ4 174 aa8.15□□□□□ -1.1
SS18-222ENST00000582792 A0A0U1RQV1 116 aa8.14□□□□□ -1.11
SS18-222ENST00000582792 LINC00587B1AMM8 73 aa8.14□□□□□ -1.11
SS18-222ENST00000582792 NMUP48645 174 aa8.14□□□□□ -1.11
SS18-222ENST00000582792 MYMXA0A1B0GTQ4 84 aa8.13□□□□□ -1.11
SS18-222ENST00000582792 J3QQQ9 107 aa8.13□□□□□ -1.11
SS18-222ENST00000582792 FAM19A5Q7Z5A7 132 aaPredicted RBP8.13□□□□□ -1.11
SS18-222ENST00000582792 NDUFA12Q9UI09 145 aa8.13□□□□□ -1.11
SS18-222ENST00000582792 ERG28Q9UKR5 140 aa8.13□□□□□ -1.11
SS18-222ENST00000582792 RPL13AP40429 203 aaKnown RBP8.12□□□□□ -1.11
SS18-222ENST00000582792 LGALS3P17931 250 aaKnown RBP8.11□□□□□ -1.11
SS18-222ENST00000582792 TSPEAR-AS2P59090 65 aa8.11□□□□□ -1.11
SS18-222ENST00000582792 GAGE2EQ4V326 116 aa8.11□□□□□ -1.11
SS18-222ENST00000582792 KRTAP7-1Q8IUC3 87 aa8.11□□□□□ -1.11
SS18-222ENST00000582792 GAGE2DQ9UEU5 116 aa8.11□□□□□ -1.11
SS18-222ENST00000582792 C9orf129Q5T035 196 aaKnown RBP8.1□□□□□ -1.11
SS18-222ENST00000582792 M0QXV9 152 aa8.09□□□□□ -1.11
SS18-222ENST00000582792 UBE2BP63146 152 aa8.09□□□□□ -1.11
SS18-222ENST00000582792 PFN2P35080 140 aa8.08□□□□□ -1.12
SS18-222ENST00000582792 FAT4Q6V0I7 4981 aa8.08□□□□□ -1.12
SS18-222ENST00000582792 MEIG1Q5JSS6 88 aa8.07□□□□□ -1.12
SS18-222ENST00000582792 IGLV5-37A0A075B6J1 123 aa8.06□□□□□ -1.12
SS18-222ENST00000582792 LINC00158P58513 81 aa8.06□□□□□ -1.12
SS18-222ENST00000582792 XAGE1AQ9HD64 81 aa8.06□□□□□ -1.12
SS18-222ENST00000582792 TP73-AS1Q9UF72 201 aa8.06□□□□□ -1.12
SS18-222ENST00000582792 SMIM13P0DJ93 91 aa8.05□□□□□ -1.12
SS18-222ENST00000582792 LCE2AQ5TA79 106 aaPredicted RBP8.05□□□□□ -1.12
SS18-222ENST00000582792 SND1-IT1Q9HBX3 110 aa8.05□□□□□ -1.12
SS18-222ENST00000582792 IGKV2D-26A0A0A0MRZ7 120 aa8.04□□□□□ -1.12
SS18-222ENST00000582792 LOC107984156A0A0G2JMH3 177 aa8.04□□□□□ -1.12
SS18-222ENST00000582792 HSBP1L1C9JCN9 74 aa8.04□□□□□ -1.12
SS18-222ENST00000582792 ZNF861PO60384 105 aa8.04□□□□□ -1.12
SS18-222ENST00000582792 TIMM17BO60830 172 aa8.04□□□□□ -1.12
SS18-222ENST00000582792 SCGB1D1O95968 90 aa8.04□□□□□ -1.12
SS18-222ENST00000582792 ANKRD39Q53RE8 183 aa8.04□□□□□ -1.12
SS18-222ENST00000582792 ARL17AQ8IVW1 177 aa8.04□□□□□ -1.12
SS18-222ENST00000582792 ATOH7Q8N100 152 aa8.04□□□□□ -1.12
SS18-222ENST00000582792 A0A0J9YXY3 114 aa8.03□□□□□ -1.12
SS18-222ENST00000582792 RPL24P83731 157 aaKnown RBP8.03□□□□□ -1.12
SS18-222ENST00000582792 LBHQ53QV2 105 aaPredicted RBP8.03□□□□□ -1.12
SS18-222ENST00000582792 TMA7Q9Y2S6 64 aaKnown RBP8.03□□□□□ -1.12
SS18-222ENST00000582792 ZNF815PA8K554 130 aa8.02□□□□□ -1.13
SS18-222ENST00000582792 TSPAN13O95857 204 aa8.02□□□□□ -1.13
SS18-222ENST00000582792 JOSD1Q15040 202 aaPredicted RBP8.02□□□□□ -1.13
SS18-222ENST00000582792 MIR7-3HGQ8N6C7 128 aa8.02□□□□□ -1.13
SS18-222ENST00000582792 C22orf24Q9Y442 160 aa8.02□□□□□ -1.13
SS18-222ENST00000582792 A0A0U1RRA0 63 aa8□□□□□ -1.13
SS18-222ENST00000582792 VPREB1P12018 145 aa8□□□□□ -1.13
SS18-222ENST00000582792 MRPL55Q7Z7F7 128 aaKnown RBP7.99□□□□□ -1.13
SS18-222ENST00000582792 NKAPP1Q8N9T2 125 aa7.99□□□□□ -1.13
SS18-222ENST00000582792 A0A087X002 238 aa7.98□□□□□ -1.13
SS18-222ENST00000582792 LITAFQ99732 161 aa7.98□□□□□ -1.13
SS18-222ENST00000582792 TTTY13Q9BZ97 58 aa7.98□□□□□ -1.13
SS18-222ENST00000582792 KRTAP9-6A0A140TA67 174 aa7.97□□□□□ -1.13
SS18-222ENST00000582792 ADAMTSL4-AS1Q5T5F5 129 aa7.97□□□□□ -1.13
SS18-222ENST00000582792 PCP2Q8IVA1 136 aa7.97□□□□□ -1.13
SS18-222ENST00000582792 PPDPFQ9H3Y8 114 aa7.97□□□□□ -1.13
SS18-222ENST00000582792 TMEM238C9JI98 176 aa7.96□□□□□ -1.14
SS18-222ENST00000582792 NDUFC2O95298 119 aa7.96□□□□□ -1.14
SS18-222ENST00000582792 SCGB1D4Q6XE38 83 aa7.96□□□□□ -1.14
SS18-222ENST00000582792 Q6ZVH6 145 aa7.96□□□□□ -1.14
SS18-222ENST00000582792 BOD1L2Q8IYS8 172 aa7.96□□□□□ -1.14
SS18-222ENST00000582792 TYMSOSQ8TAI1 123 aa7.96□□□□□ -1.14
SS18-222ENST00000582792 LINC00167Q96N53 147 aa7.96□□□□□ -1.14
SS18-222ENST00000582792 MIEN1Q9BRT3 115 aa7.96□□□□□ -1.14
SS18-222ENST00000582792 SPANXDQ9BXN6 97 aa7.96□□□□□ -1.14
SS18-222ENST00000582792 SPANXCQ9NY87 97 aa7.96□□□□□ -1.14
SS18-222ENST00000582792 M0R378 163 aa7.95□□□□□ -1.14
SS18-222ENST00000582792 CRYGAP11844 174 aa7.95□□□□□ -1.14
SS18-222ENST00000582792 RPL28P46779 137 aaKnown RBP7.95□□□□□ -1.14
SS18-222ENST00000582792 DAND5Q8N907 189 aa7.95□□□□□ -1.14
SS18-222ENST00000582792 Q8NDZ9 215 aa7.95□□□□□ -1.14
SS18-222ENST00000582792 COPS9Q8WXC6 57 aa7.95□□□□□ -1.14
SS18-222ENST00000582792 TRBV10-2A0A0K0K1G8 114 aa7.94□□□□□ -1.14
SS18-222ENST00000582792 DLEU1O43261 78 aa7.94□□□□□ -1.14
SS18-222ENST00000582792 IFITM1P13164 125 aa7.94□□□□□ -1.14
SS18-222ENST00000582792 BCE1O60756 84 aa7.93□□□□□ -1.14
SS18-222ENST00000582792 COX8AP10176 69 aa7.93□□□□□ -1.14
SS18-222ENST00000582792 PYY3Q5JQD4 70 aa7.93□□□□□ -1.14
SS18-222ENST00000582792 SOSTDC1Q6X4U4 206 aa7.93□□□□□ -1.14
SS18-222ENST00000582792 LINC00308Q8TCZ7 52 aa7.93□□□□□ -1.14
SS18-222ENST00000582792 VAMP8Q9BV40 100 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms