RNA–Protein interactions for RNA: ENST00000582303.1

CDC42EP4-208, Transcript of CDC42 effector protein 4, humanhuman

TSL 5

Gene CDC42EP4, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-208ENST00000582303 FP248Q71RG6 208 aaPredicted RBP8.39□□□□□ -1.07
CDC42EP4-208ENST00000582303 MUC17Q685J3 4493 aa8.38□□□□□ -1.07
CDC42EP4-208ENST00000582303 HBDP02042 147 aa8.37□□□□□ -1.07
CDC42EP4-208ENST00000582303 TMEM170BQ5T4T1 132 aa8.37□□□□□ -1.07
CDC42EP4-208ENST00000582303 ZNF625Q96I27 306 aaPredicted RBP8.37□□□□□ -1.07
CDC42EP4-208ENST00000582303 SEC11CQ9BY50 192 aa8.37□□□□□ -1.07
CDC42EP4-208ENST00000582303 LINC00158P58513 81 aa8.36□□□□□ -1.07
CDC42EP4-208ENST00000582303 LINC00337Q8N6G1 96 aa8.36□□□□□ -1.07
CDC42EP4-208ENST00000582303 ATP6V1G1O75348 118 aa8.35□□□□□ -1.07
CDC42EP4-208ENST00000582303 LINC00614P0C842 121 aa8.35□□□□□ -1.07
CDC42EP4-208ENST00000582303 C3orf22Q8N5N4 141 aa8.35□□□□□ -1.07
CDC42EP4-208ENST00000582303 SPRR4Q96PI1 79 aa8.35□□□□□ -1.07
CDC42EP4-208ENST00000582303 S100A12P80511 92 aa8.34□□□□□ -1.07
CDC42EP4-208ENST00000582303 BAGE3Q86Y29 109 aa8.34□□□□□ -1.07
CDC42EP4-208ENST00000582303 C11orf86A6NJI1 115 aa8.32□□□□□ -1.08
CDC42EP4-208ENST00000582303 LINC00587B1AMM8 73 aa8.32□□□□□ -1.08
CDC42EP4-208ENST00000582303 PRYO14603 147 aa8.32□□□□□ -1.08
CDC42EP4-208ENST00000582303 SPINK1P00995 79 aa8.32□□□□□ -1.08
CDC42EP4-208ENST00000582303 RHEBQ15382 184 aa8.32□□□□□ -1.08
CDC42EP4-208ENST00000582303 NDUFA12Q9UI09 145 aa8.32□□□□□ -1.08
CDC42EP4-208ENST00000582303 A0A096LNJ9 63 aa8.31□□□□□ -1.08
CDC42EP4-208ENST00000582303 C18orf32Q8TCD1 76 aa8.31□□□□□ -1.08
CDC42EP4-208ENST00000582303 CHTOPQ9Y3Y2 248 aaKnown RBP8.3□□□□□ -1.08
CDC42EP4-208ENST00000582303 TRAPPC1Q9Y5R8 145 aa8.3□□□□□ -1.08
CDC42EP4-208ENST00000582303 ETDCA0A1B0GVM5 59 aa8.29□□□□□ -1.08
CDC42EP4-208ENST00000582303 HERV-K104P63124 156 aa8.29□□□□□ -1.08
CDC42EP4-208ENST00000582303 IFITM2Q01629 132 aa8.29□□□□□ -1.08
CDC42EP4-208ENST00000582303 BOD1L2Q8IYS8 172 aa8.29□□□□□ -1.08
CDC42EP4-208ENST00000582303 FAM19A2Q8N3H0 131 aa8.29□□□□□ -1.08
CDC42EP4-208ENST00000582303 Q8NBF4 154 aa8.29□□□□□ -1.08
CDC42EP4-208ENST00000582303 Q8NDZ9 215 aa8.29□□□□□ -1.08
CDC42EP4-208ENST00000582303 RPS10P5Q9NQ39 176 aa8.29□□□□□ -1.08
CDC42EP4-208ENST00000582303 MEIG1Q5JSS6 88 aa8.28□□□□□ -1.08
CDC42EP4-208ENST00000582303 COMMD7Q86VX2 200 aa8.28□□□□□ -1.08
CDC42EP4-208ENST00000582303 MAP1LC3CQ9BXW4 147 aa8.28□□□□□ -1.08
CDC42EP4-208ENST00000582303 A0A0U1RRA0 63 aa8.27□□□□□ -1.09
CDC42EP4-208ENST00000582303 KRTAP9-6A0A140TA67 174 aa8.27□□□□□ -1.09
CDC42EP4-208ENST00000582303 SEC61BP60468 96 aaKnown RBP8.27□□□□□ -1.09
CDC42EP4-208ENST00000582303 PMCHL1Q16048 86 aa8.27□□□□□ -1.09
CDC42EP4-208ENST00000582303 KCNQ1DNQ9H478 68 aa8.27□□□□□ -1.09
CDC42EP4-208ENST00000582303 TRAV12-1A0A0B4J245 112 aa8.26□□□□□ -1.09
CDC42EP4-208ENST00000582303 TMEM223A0PJW6 202 aa8.26□□□□□ -1.09
CDC42EP4-208ENST00000582303 SPRR1AP35321 89 aa8.26□□□□□ -1.09
CDC42EP4-208ENST00000582303 LINC01547P58512 204 aaPredicted RBP8.26□□□□□ -1.09
CDC42EP4-208ENST00000582303 KRTAP13-3Q3SY46 172 aa8.26□□□□□ -1.09
CDC42EP4-208ENST00000582303 ASB16-AS1Q495Z4 193 aa8.26□□□□□ -1.09
CDC42EP4-208ENST00000582303 URB1-AS1Q96HZ7 61 aa8.26□□□□□ -1.09
CDC42EP4-208ENST00000582303 SMIM13P0DJ93 91 aa8.25□□□□□ -1.09
CDC42EP4-208ENST00000582303 RPS29P62273 56 aaKnown RBP8.25□□□□□ -1.09
CDC42EP4-208ENST00000582303 DAND5Q8N907 189 aa8.25□□□□□ -1.09
CDC42EP4-208ENST00000582303 SMCR5Q8TEV8 140 aa8.25□□□□□ -1.09
CDC42EP4-208ENST00000582303 LINC00483Q53H64 154 aa8.24□□□□□ -1.09
CDC42EP4-208ENST00000582303 MIR7-3HGQ8N6C7 128 aa8.24□□□□□ -1.09
CDC42EP4-208ENST00000582303 NCR3O14931 201 aa8.23□□□□□ -1.09
CDC42EP4-208ENST00000582303 C10orf91Q5T1B1 145 aa8.23□□□□□ -1.09
CDC42EP4-208ENST00000582303 SSBP3-AS1Q7Z2R9 100 aa8.23□□□□□ -1.09
CDC42EP4-208ENST00000582303 CHCHD1Q96BP2 118 aaKnown RBP8.23□□□□□ -1.09
CDC42EP4-208ENST00000582303 MYMXA0A1B0GTQ4 84 aa8.22□□□□□ -1.09
CDC42EP4-208ENST00000582303 GAGE2AQ6NT46 116 aa8.22□□□□□ -1.09
CDC42EP4-208ENST00000582303 IFI27L1Q96BM0 104 aa8.22□□□□□ -1.09
CDC42EP4-208ENST00000582303 TRBV10-3A0A0K0K1G6 114 aa8.21□□□□□ -1.1
CDC42EP4-208ENST00000582303 KRTAP4-16G5E9R7 235 aaPredicted RBP8.21□□□□□ -1.1
CDC42EP4-208ENST00000582303 SLC25A20O43772 301 aa8.2□□□□□ -1.1
CDC42EP4-208ENST00000582303 TRBV10-2A0A0K0K1G8 114 aa8.19□□□□□ -1.1
CDC42EP4-208ENST00000582303 MOBPQ13875 183 aa8.19□□□□□ -1.1
CDC42EP4-208ENST00000582303 NDUFA5Q16718 116 aa8.19□□□□□ -1.1
CDC42EP4-208ENST00000582303 MIEN1Q9BRT3 115 aa8.19□□□□□ -1.1
CDC42EP4-208ENST00000582303 IGLV9-49A0A0B4J1Y8 123 aa8.18□□□□□ -1.1
CDC42EP4-208ENST00000582303 B5MCH6 92 aa8.18□□□□□ -1.1
CDC42EP4-208ENST00000582303 DDTP30046 118 aa8.18□□□□□ -1.1
CDC42EP4-208ENST00000582303 JOSD1Q15040 202 aaPredicted RBP8.18□□□□□ -1.1
CDC42EP4-208ENST00000582303 LOC107984156A0A0G2JMH3 177 aa8.16□□□□□ -1.1
CDC42EP4-208ENST00000582303 SNAPINO95295 136 aa8.16□□□□□ -1.1
CDC42EP4-208ENST00000582303 Q6ZRX8 168 aa8.16□□□□□ -1.1
CDC42EP4-208ENST00000582303 ARL17AQ8IVW1 177 aa8.16□□□□□ -1.1
CDC42EP4-208ENST00000582303 Q8N377 158 aa8.16□□□□□ -1.1
CDC42EP4-208ENST00000582303 SPANXB1Q9NS25 103 aaPredicted RBP8.16□□□□□ -1.1
CDC42EP4-208ENST00000582303 HSBP1O75506 76 aa8.15□□□□□ -1.1
CDC42EP4-208ENST00000582303 APOC3P02656 99 aa8.15□□□□□ -1.1
CDC42EP4-208ENST00000582303 S100A7L2Q5SY68 101 aa8.15□□□□□ -1.1
CDC42EP4-208ENST00000582303 SVBPQ8N300 66 aa8.15□□□□□ -1.1
CDC42EP4-208ENST00000582303 CBY1Q9Y3M2 126 aa8.15□□□□□ -1.1
CDC42EP4-208ENST00000582303 PLNP26678 52 aa8.13□□□□□ -1.11
CDC42EP4-208ENST00000582303 NMUP48645 174 aa8.13□□□□□ -1.11
CDC42EP4-208ENST00000582303 HERVK_113P61574 105 aa8.13□□□□□ -1.11
CDC42EP4-208ENST00000582303 C5orf52A6NGY3 159 aa8.12□□□□□ -1.11
CDC42EP4-208ENST00000582303 LEPROTO15243 131 aa8.12□□□□□ -1.11
CDC42EP4-208ENST00000582303 NDUFC2O95298 119 aa8.12□□□□□ -1.11
CDC42EP4-208ENST00000582303 HINT1P49773 126 aaPredicted RBP8.12□□□□□ -1.11
CDC42EP4-208ENST00000582303 C9orf153Q5TBE3 101 aa8.12□□□□□ -1.11
CDC42EP4-208ENST00000582303 KRTAP3-3Q9BYR6 98 aa8.12□□□□□ -1.11
CDC42EP4-208ENST00000582303 KRTAP3-2Q9BYR7 98 aa8.12□□□□□ -1.11
CDC42EP4-208ENST00000582303 ERC2-IT1O76042 136 aa8.11□□□□□ -1.11
CDC42EP4-208ENST00000582303 XP32Q5T750 250 aa8.11□□□□□ -1.11
CDC42EP4-208ENST00000582303 Q9BRP9 147 aa8.11□□□□□ -1.11
CDC42EP4-208ENST00000582303 TRAV23DV6A0A075B6W5 121 aa8.1□□□□□ -1.11
CDC42EP4-208ENST00000582303 H0Y8G0 127 aa8.1□□□□□ -1.11
CDC42EP4-208ENST00000582303 IGLV6-57P01721 117 aa8.1□□□□□ -1.11
CDC42EP4-208ENST00000582303 J3QQQ9 107 aa8.09□□□□□ -1.11
CDC42EP4-208ENST00000582303 LEPROTL1O95214 131 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms