RNA–Protein interactions for RNA: ENST00000581849.1

CASC3-207, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-207ENST00000581849 M0R378 163 aa13.12□□□□□ -0.31
CASC3-207ENST00000581849 FAM19A1Q7Z5A9 133 aa13.12□□□□□ -0.31
CASC3-207ENST00000581849 LINC00158P58513 81 aa13.11□□□□□ -0.31
CASC3-207ENST00000581849 PRLHP81277 87 aa13.11□□□□□ -0.31
CASC3-207ENST00000581849 Q8NDZ9 215 aa13.11□□□□□ -0.31
CASC3-207ENST00000581849 TMEM238C9JI98 176 aa13.1□□□□□ -0.31
CASC3-207ENST00000581849 HSBP1O75506 76 aa13.1□□□□□ -0.31
CASC3-207ENST00000581849 KRTAP13-2Q52LG2 175 aa13.1□□□□□ -0.31
CASC3-207ENST00000581849 TSPAN13O95857 204 aa13.09□□□□□ -0.31
CASC3-207ENST00000581849 ANAPC11Q9NYG5 84 aa13.09□□□□□ -0.31
CASC3-207ENST00000581849 HERV-K104P63124 156 aa13.08□□□□□ -0.32
CASC3-207ENST00000581849 CTAG1AP78358 180 aa13.08□□□□□ -0.32
CASC3-207ENST00000581849 LINC00587B1AMM8 73 aa13.07□□□□□ -0.32
CASC3-207ENST00000581849 IGKV2D-26A0A0A0MRZ7 120 aa13.05□□□□□ -0.32
CASC3-207ENST00000581849 CBLN2Q8IUK8 224 aa13.05□□□□□ -0.32
CASC3-207ENST00000581849 ATP6V1G1O75348 118 aa13.04□□□□□ -0.32
CASC3-207ENST00000581849 FAM19A2Q8N3H0 131 aa13.04□□□□□ -0.32
CASC3-207ENST00000581849 LINC00304Q8N9R0 145 aa13.04□□□□□ -0.32
CASC3-207ENST00000581849 PLEKHB2Q96CS7 222 aa13.04□□□□□ -0.32
CASC3-207ENST00000581849 A0A0U1RRA0 63 aa13.03□□□□□ -0.32
CASC3-207ENST00000581849 SMIM13P0DJ93 91 aa13.03□□□□□ -0.32
CASC3-207ENST00000581849 MEIG1Q5JSS6 88 aa13.03□□□□□ -0.32
CASC3-207ENST00000581849 MYMXA0A1B0GTQ4 84 aa13.01□□□□□ -0.33
CASC3-207ENST00000581849 PRYO14603 147 aa13.01□□□□□ -0.33
CASC3-207ENST00000581849 TRGC2P03986 189 aa13.01□□□□□ -0.33
CASC3-207ENST00000581849 MIR7-3HGQ8N6C7 128 aa13.01□□□□□ -0.33
CASC3-207ENST00000581849 MAP1LC3CQ9BXW4 147 aa13.01□□□□□ -0.33
CASC3-207ENST00000581849 NDUFA12Q9UI09 145 aa13.01□□□□□ -0.33
CASC3-207ENST00000581849 LEPROTL1O95214 131 aa13□□□□□ -0.33
CASC3-207ENST00000581849 BOD1L2Q8IYS8 172 aa13□□□□□ -0.33
CASC3-207ENST00000581849 HIGD2AQ9BW72 106 aa12.99□□□□□ -0.33
CASC3-207ENST00000581849 LINC00337Q8N6G1 96 aa12.98□□□□□ -0.33
CASC3-207ENST00000581849 SERF1AO75920 110 aa12.97□□□□□ -0.33
CASC3-207ENST00000581849 PLNP26678 52 aa12.97□□□□□ -0.33
CASC3-207ENST00000581849 SPRR1AP35321 89 aa12.97□□□□□ -0.33
CASC3-207ENST00000581849 LINC00310P59036 64 aa12.97□□□□□ -0.33
CASC3-207ENST00000581849 KCNQ1DNQ9H478 68 aa12.97□□□□□ -0.33
CASC3-207ENST00000581849 ZNF706Q9Y5V0 76 aaPredicted RBP12.97□□□□□ -0.33
CASC3-207ENST00000581849 SPRR4Q96PI1 79 aa12.96□□□□□ -0.33
CASC3-207ENST00000581849 HSPB8Q9UJY1 196 aa12.96□□□□□ -0.33
CASC3-207ENST00000581849 LOC107984156A0A0G2JMH3 177 aa12.95□□□□□ -0.34
CASC3-207ENST00000581849 LEPROTO15243 131 aa12.95□□□□□ -0.34
CASC3-207ENST00000581849 ARL17AQ8IVW1 177 aa12.95□□□□□ -0.34
CASC3-207ENST00000581849 H0Y8G0 127 aa12.94□□□□□ -0.34
CASC3-207ENST00000581849 NCR3O14931 201 aa12.93□□□□□ -0.34
CASC3-207ENST00000581849 KRTAP4-16G5E9R7 235 aaPredicted RBP12.92□□□□□ -0.34
CASC3-207ENST00000581849 TSPEAR-AS2P59090 65 aa12.92□□□□□ -0.34
CASC3-207ENST00000581849 HERVK_113P61574 105 aa12.92□□□□□ -0.34
CASC3-207ENST00000581849 S100A12P80511 92 aa12.92□□□□□ -0.34
CASC3-207ENST00000581849 SPAG11AQ6PDA7 123 aa12.92□□□□□ -0.34
CASC3-207ENST00000581849 DPM2O94777 84 aa12.91□□□□□ -0.34
CASC3-207ENST00000581849 NMUP48645 174 aa12.91□□□□□ -0.34
CASC3-207ENST00000581849 C3orf22Q8N5N4 141 aa12.91□□□□□ -0.34
CASC3-207ENST00000581849 J3QQQ9 107 aa12.9□□□□□ -0.34
CASC3-207ENST00000581849 TRBV10-3A0A0K0K1G6 114 aa12.89□□□□□ -0.35
CASC3-207ENST00000581849 TRBV10-2A0A0K0K1G8 114 aa12.89□□□□□ -0.35
CASC3-207ENST00000581849 ETDCA0A1B0GVM5 59 aa12.89□□□□□ -0.35
CASC3-207ENST00000581849 RETNLBQ9BQ08 111 aa12.88□□□□□ -0.35
CASC3-207ENST00000581849 COLCA2A8K830 154 aa12.87□□□□□ -0.35
CASC3-207ENST00000581849 IGKCP01834 107 aa12.87□□□□□ -0.35
CASC3-207ENST00000581849 TPRXLQ17RH7 258 aa12.87□□□□□ -0.35
CASC3-207ENST00000581849 MUC2Q02817 5179 aa12.87□□□□□ -0.35
CASC3-207ENST00000581849 FABP4P15090 132 aa12.86□□□□□ -0.35
CASC3-207ENST00000581849 SMCR5Q8TEV8 140 aa12.86□□□□□ -0.35
CASC3-207ENST00000581849 LGALS3P17931 250 aaKnown RBP12.85□□□□□ -0.35
CASC3-207ENST00000581849 A0A0U1RQV1 116 aa12.84□□□□□ -0.35
CASC3-207ENST00000581849 DAND5Q8N907 189 aa12.84□□□□□ -0.35
CASC3-207ENST00000581849 MIEN1Q9BRT3 115 aa12.84□□□□□ -0.35
CASC3-207ENST00000581849 SPANXB1Q9NS25 103 aaPredicted RBP12.84□□□□□ -0.35
CASC3-207ENST00000581849 IGLV7-46A0A075B6I9 117 aa12.83□□□□□ -0.36
CASC3-207ENST00000581849 NDUFC2O95298 119 aa12.83□□□□□ -0.36
CASC3-207ENST00000581849 DDTP30046 118 aa12.83□□□□□ -0.36
CASC3-207ENST00000581849 LINC00483Q53H64 154 aa12.83□□□□□ -0.36
CASC3-207ENST00000581849 SLC7A5P1Q8MH63 180 aa12.82□□□□□ -0.36
CASC3-207ENST00000581849 PMCHL2Q9BQD1 86 aa12.82□□□□□ -0.36
CASC3-207ENST00000581849 B5MCH6 92 aa12.81□□□□□ -0.36
CASC3-207ENST00000581849 C4orf48Q5BLP8 95 aa12.81□□□□□ -0.36
CASC3-207ENST00000581849 CDIP1Q9H305 208 aa12.79□□□□□ -0.36
CASC3-207ENST00000581849 E9PLD3 99 aa12.78□□□□□ -0.36
CASC3-207ENST00000581849 FP248Q71RG6 208 aaPredicted RBP12.78□□□□□ -0.36
CASC3-207ENST00000581849 IGLV6-57P01721 117 aa12.77□□□□□ -0.37
CASC3-207ENST00000581849 Q6ZRX8 168 aa12.77□□□□□ -0.37
CASC3-207ENST00000581849 Q8NBF4 154 aa12.77□□□□□ -0.37
CASC3-207ENST00000581849 S100A7L2Q5SY68 101 aa12.76□□□□□ -0.37
CASC3-207ENST00000581849 PPDPFQ9H3Y8 114 aa12.76□□□□□ -0.37
CASC3-207ENST00000581849 A0A0J9YXY3 114 aa12.75□□□□□ -0.37
CASC3-207ENST00000581849 SPINK1P00995 79 aa12.75□□□□□ -0.37
CASC3-207ENST00000581849 SYS1-DBNDD2H3BUS1 97 aa12.73□□□□□ -0.37
CASC3-207ENST00000581849 JOSD1Q15040 202 aaPredicted RBP12.73□□□□□ -0.37
CASC3-207ENST00000581849 GAGE2AQ6NT46 116 aa12.73□□□□□ -0.37
CASC3-207ENST00000581849 Q9BRP9 147 aa12.73□□□□□ -0.37
CASC3-207ENST00000581849 CBY1Q9Y3M2 126 aa12.73□□□□□ -0.37
CASC3-207ENST00000581849 TRAV23DV6A0A075B6W5 121 aa12.72□□□□□ -0.37
CASC3-207ENST00000581849 ERC2-IT1O76042 136 aa12.72□□□□□ -0.37
CASC3-207ENST00000581849 SOSTDC1Q6X4U4 206 aa12.72□□□□□ -0.37
CASC3-207ENST00000581849 MUC17Q685J3 4493 aa12.71□□□□□ -0.37
CASC3-207ENST00000581849 HIST1H2BKO60814 126 aa12.71□□□□□ -0.37
CASC3-207ENST00000581849 HIST1H2BJP06899 126 aa12.71□□□□□ -0.37
CASC3-207ENST00000581849 HIST1H2BOP23527 126 aa12.71□□□□□ -0.37
CASC3-207ENST00000581849 HIST1H2BBP33778 126 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms