RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 FABP4P15090 132 aa11.65□□□□□ -0.54
SREBF1-220ENST00000581707 RPL13AP40429 203 aaKnown RBP11.65□□□□□ -0.54
SREBF1-220ENST00000581707 Q8NDZ9 215 aa11.65□□□□□ -0.54
SREBF1-220ENST00000581707 UBR4Q5T4S7 5183 aa11.65□□□□□ -0.55
SREBF1-220ENST00000581707 UBE2AP49459 152 aa11.64□□□□□ -0.55
SREBF1-220ENST00000581707 ATP6V1G1O75348 118 aa11.63□□□□□ -0.55
SREBF1-220ENST00000581707 SMIM13P0DJ93 91 aa11.63□□□□□ -0.55
SREBF1-220ENST00000581707 HERV-K104P63124 156 aa11.63□□□□□ -0.55
SREBF1-220ENST00000581707 NDUFA12Q9UI09 145 aa11.63□□□□□ -0.55
SREBF1-220ENST00000581707 PLNP26678 52 aa11.62□□□□□ -0.55
SREBF1-220ENST00000581707 MEIG1Q5JSS6 88 aa11.62□□□□□ -0.55
SREBF1-220ENST00000581707 KRTAP13-1Q8IUC0 172 aa11.62□□□□□ -0.55
SREBF1-220ENST00000581707 MYMXA0A1B0GTQ4 84 aa11.6□□□□□ -0.55
SREBF1-220ENST00000581707 LINC00587B1AMM8 73 aa11.6□□□□□ -0.55
SREBF1-220ENST00000581707 TMEM238C9JI98 176 aa11.6□□□□□ -0.55
SREBF1-220ENST00000581707 DPM2O94777 84 aa11.6□□□□□ -0.55
SREBF1-220ENST00000581707 TMEM126AQ9H061 195 aa11.6□□□□□ -0.55
SREBF1-220ENST00000581707 LEPROTO15243 131 aa11.59□□□□□ -0.55
SREBF1-220ENST00000581707 PMCHL2Q9BQD1 86 aa11.59□□□□□ -0.55
SREBF1-220ENST00000581707 MIR7-3HGQ8N6C7 128 aa11.58□□□□□ -0.56
SREBF1-220ENST00000581707 PLEKHB2Q96CS7 222 aa11.58□□□□□ -0.56
SREBF1-220ENST00000581707 M0R378 163 aa11.57□□□□□ -0.56
SREBF1-220ENST00000581707 IGKCP01834 107 aa11.57□□□□□ -0.56
SREBF1-220ENST00000581707 TSPEAR-AS2P59090 65 aa11.57□□□□□ -0.56
SREBF1-220ENST00000581707 FAM19A1Q7Z5A9 133 aa11.57□□□□□ -0.56
SREBF1-220ENST00000581707 MAP1LC3CQ9BXW4 147 aa11.57□□□□□ -0.56
SREBF1-220ENST00000581707 LRP2P98164 4655 aa11.56□□□□□ -0.56
SREBF1-220ENST00000581707 HERVK_113P61574 105 aa11.56□□□□□ -0.56
SREBF1-220ENST00000581707 PRLHP81277 87 aa11.56□□□□□ -0.56
SREBF1-220ENST00000581707 BOD1L2Q8IYS8 172 aa11.56□□□□□ -0.56
SREBF1-220ENST00000581707 A0A087X002 238 aa11.55□□□□□ -0.56
SREBF1-220ENST00000581707 HIST1H2BKO60814 126 aa11.55□□□□□ -0.56
SREBF1-220ENST00000581707 HIST1H2BJP06899 126 aa11.55□□□□□ -0.56
SREBF1-220ENST00000581707 CRYGAP11844 174 aa11.55□□□□□ -0.56
SREBF1-220ENST00000581707 HIST1H2BOP23527 126 aa11.55□□□□□ -0.56
SREBF1-220ENST00000581707 HIST1H2BBP33778 126 aa11.55□□□□□ -0.56
SREBF1-220ENST00000581707 HIST1H2BDP58876 126 aa11.55□□□□□ -0.56
SREBF1-220ENST00000581707 HIST1H2BCP62807 126 aa11.55□□□□□ -0.56
SREBF1-220ENST00000581707 HIST2H2BEQ16778 126 aa11.55□□□□□ -0.56
SREBF1-220ENST00000581707 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.55□□□□□ -0.56
SREBF1-220ENST00000581707 HIST1H2BHQ93079 126 aa11.55□□□□□ -0.56
SREBF1-220ENST00000581707 HIST1H2BNQ99877 126 aa11.55□□□□□ -0.56
SREBF1-220ENST00000581707 HIST1H2BMQ99879 126 aa11.55□□□□□ -0.56
SREBF1-220ENST00000581707 J3QQQ9 107 aa11.54□□□□□ -0.56
SREBF1-220ENST00000581707 ANAPC11Q9NYG5 84 aa11.54□□□□□ -0.56
SREBF1-220ENST00000581707 NCR3O14931 201 aa11.51□□□□□ -0.57
SREBF1-220ENST00000581707 LGALS3P17931 250 aaKnown RBP11.51□□□□□ -0.57
SREBF1-220ENST00000581707 NMUP48645 174 aa11.51□□□□□ -0.57
SREBF1-220ENST00000581707 TYMSOSQ8TAI1 123 aa11.51□□□□□ -0.57
SREBF1-220ENST00000581707 IGKV2D-26A0A0A0MRZ7 120 aa11.5□□□□□ -0.57
SREBF1-220ENST00000581707 SYS1-DBNDD2H3BUS1 97 aa11.49□□□□□ -0.57
SREBF1-220ENST00000581707 FAM229BQ4G0N7 80 aa11.49□□□□□ -0.57
SREBF1-220ENST00000581707 DAND5Q8N907 189 aa11.49□□□□□ -0.57
SREBF1-220ENST00000581707 LOC107984156A0A0G2JMH3 177 aa11.48□□□□□ -0.57
SREBF1-220ENST00000581707 ARL17AQ8IVW1 177 aa11.48□□□□□ -0.57
SREBF1-220ENST00000581707 PRYO14603 147 aa11.47□□□□□ -0.57
SREBF1-220ENST00000581707 KRTAP13-2Q52LG2 175 aa11.47□□□□□ -0.57
SREBF1-220ENST00000581707 HIGD2AQ9BW72 106 aa11.47□□□□□ -0.57
SREBF1-220ENST00000581707 E9PLD3 99 aa11.46□□□□□ -0.57
SREBF1-220ENST00000581707 KCNQ1DNQ9H478 68 aa11.46□□□□□ -0.57
SREBF1-220ENST00000581707 TRBV10-3A0A0K0K1G6 114 aa11.45□□□□□ -0.58
SREBF1-220ENST00000581707 TSPAN13O95857 204 aa11.45□□□□□ -0.58
SREBF1-220ENST00000581707 SPRR1AP35321 89 aa11.43□□□□□ -0.58
SREBF1-220ENST00000581707 LINC01545Q5VT33 79 aa11.43□□□□□ -0.58
SREBF1-220ENST00000581707 LINC00337Q8N6G1 96 aa11.43□□□□□ -0.58
SREBF1-220ENST00000581707 MIEN1Q9BRT3 115 aa11.43□□□□□ -0.58
SREBF1-220ENST00000581707 PRR4Q16378 134 aa11.42□□□□□ -0.58
SREBF1-220ENST00000581707 PET117Q6UWS5 81 aa11.42□□□□□ -0.58
SREBF1-220ENST00000581707 A0A0J9YXY3 114 aa11.41□□□□□ -0.58
SREBF1-220ENST00000581707 TRBV10-2A0A0K0K1G8 114 aa11.41□□□□□ -0.58
SREBF1-220ENST00000581707 ETDCA0A1B0GVM5 59 aa11.41□□□□□ -0.58
SREBF1-220ENST00000581707 S100A12P80511 92 aa11.41□□□□□ -0.58
SREBF1-220ENST00000581707 KRTAP4-16G5E9R7 235 aaPredicted RBP11.4□□□□□ -0.58
SREBF1-220ENST00000581707 COA6Q5JTJ3 125 aaKnown RBP11.4□□□□□ -0.58
SREBF1-220ENST00000581707 SPANXB1Q9NS25 103 aaPredicted RBP11.4□□□□□ -0.58
SREBF1-220ENST00000581707 LPAP08519 4548 aa11.39□□□□□ -0.59
SREBF1-220ENST00000581707 C3orf79P0CE67 100 aa11.39□□□□□ -0.59
SREBF1-220ENST00000581707 DDTP30046 118 aa11.39□□□□□ -0.59
SREBF1-220ENST00000581707 ADAMTSL4-AS1Q5T5F5 129 aa11.39□□□□□ -0.59
SREBF1-220ENST00000581707 NDUFC2O95298 119 aa11.38□□□□□ -0.59
SREBF1-220ENST00000581707 LINC00304Q8N9R0 145 aa11.38□□□□□ -0.59
SREBF1-220ENST00000581707 SPRR4Q96PI1 79 aa11.38□□□□□ -0.59
SREBF1-220ENST00000581707 ZNF706Q9Y5V0 76 aaPredicted RBP11.38□□□□□ -0.59
SREBF1-220ENST00000581707 NPC2P61916 151 aa11.37□□□□□ -0.59
SREBF1-220ENST00000581707 SOSTDC1Q6X4U4 206 aa11.36□□□□□ -0.59
SREBF1-220ENST00000581707 SMCR5Q8TEV8 140 aa11.36□□□□□ -0.59
SREBF1-220ENST00000581707 EIF4EBP3O60516 100 aaPredicted RBP11.35□□□□□ -0.59
SREBF1-220ENST00000581707 KRTDAPP60985 99 aa11.35□□□□□ -0.59
SREBF1-220ENST00000581707 S100A7L2Q5SY68 101 aa11.35□□□□□ -0.59
SREBF1-220ENST00000581707 C3orf22Q8N5N4 141 aa11.35□□□□□ -0.59
SREBF1-220ENST00000581707 B5MCH6 92 aa11.34□□□□□ -0.59
SREBF1-220ENST00000581707 IGLV6-57P01721 117 aa11.33□□□□□ -0.6
SREBF1-220ENST00000581707 RNF213Q63HN8 5207 aa11.33□□□□□ -0.6
SREBF1-220ENST00000581707 ZNF815PA8K554 130 aa11.32□□□□□ -0.6
SREBF1-220ENST00000581707 TIMM17BO60830 172 aa11.32□□□□□ -0.6
SREBF1-220ENST00000581707 LITAFQ99732 161 aa11.32□□□□□ -0.6
SREBF1-220ENST00000581707 LINC00308Q8TCZ7 52 aa11.3□□□□□ -0.6
SREBF1-220ENST00000581707 TTTY13Q9BZ97 58 aa11.3□□□□□ -0.6
SREBF1-220ENST00000581707 PPDPFQ9H3Y8 114 aa11.3□□□□□ -0.6
SREBF1-220ENST00000581707 C20orf202A1L168 122 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms