RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 ADAMTSL4-AS1Q5T5F5 129 aa9.95□□□□□ -0.82
SS18-216ENST00000580751 MIR7-3HGQ8N6C7 128 aa9.94□□□□□ -0.82
SS18-216ENST00000580751 FAM30AQ9NZY2 134 aa9.94□□□□□ -0.82
SS18-216ENST00000580751 LOC107984640A0A0U1RRK4 108 aa9.93□□□□□ -0.82
SS18-216ENST00000580751 TMEM238LA0A1B0GVL6 79 aa9.93□□□□□ -0.82
SS18-216ENST00000580751 A6NJY4 79 aa9.93□□□□□ -0.82
SS18-216ENST00000580751 PCP4L1A6NKN8 68 aa9.93□□□□□ -0.82
SS18-216ENST00000580751 PFN2P35080 140 aa9.93□□□□□ -0.82
SS18-216ENST00000580751 RPL24P83731 157 aaKnown RBP9.93□□□□□ -0.82
SS18-216ENST00000580751 CEND1Q8N111 149 aa9.93□□□□□ -0.82
SS18-216ENST00000580751 DNAH8Q96JB1 4490 aa9.93□□□□□ -0.82
SS18-216ENST00000580751 LINC00308Q8TCZ7 52 aa9.92□□□□□ -0.82
SS18-216ENST00000580751 LINC00474Q9P2X8 69 aa9.92□□□□□ -0.82
SS18-216ENST00000580751 RYR1P21817 5038 aa9.92□□□□□ -0.82
SS18-216ENST00000580751 XGP55808 180 aa9.91□□□□□ -0.82
SS18-216ENST00000580751 C9orf116Q5BN46 136 aaPredicted RBP9.91□□□□□ -0.82
SS18-216ENST00000580751 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.91□□□□□ -0.82
SS18-216ENST00000580751 A0A096LNI7 61 aa9.9□□□□□ -0.82
SS18-216ENST00000580751 IGKV2-24A0A0C4DH68 120 aa9.9□□□□□ -0.82
SS18-216ENST00000580751 RPL18AQ02543 176 aaKnown RBP9.9□□□□□ -0.82
SS18-216ENST00000580751 MUSTN1Q8IVN3 82 aa9.9□□□□□ -0.82
SS18-216ENST00000580751 SPACA4Q8TDM5 124 aa9.9□□□□□ -0.82
SS18-216ENST00000580751 CHTF8P0CG12 524 aa9.89□□□□□ -0.83
SS18-216ENST00000580751 BVES-AS1Q5T3Y7 98 aa9.89□□□□□ -0.83
SS18-216ENST00000580751 SCXQ7RTU7 201 aa9.89□□□□□ -0.83
SS18-216ENST00000580751 SND1-IT1Q9HBX3 110 aa9.89□□□□□ -0.83
SS18-216ENST00000580751 A0A0U1RRA0 63 aa9.88□□□□□ -0.83
SS18-216ENST00000580751 PANO1I0J062 215 aa9.88□□□□□ -0.83
SS18-216ENST00000580751 NDUFC2O95298 119 aa9.88□□□□□ -0.83
SS18-216ENST00000580751 HAMPP81172 84 aa9.88□□□□□ -0.83
SS18-216ENST00000580751 GAGE2BQ13066 116 aa9.88□□□□□ -0.83
SS18-216ENST00000580751 DPH3Q96FX2 82 aa9.88□□□□□ -0.83
SS18-216ENST00000580751 DAND5Q8N907 189 aa9.87□□□□□ -0.83
SS18-216ENST00000580751 CIRBP-AS1Q8TBR5 109 aa9.87□□□□□ -0.83
SS18-216ENST00000580751 HSPG2P98160 4391 aa9.87□□□□□ -0.83
SS18-216ENST00000580751 A6NDN8 102 aa9.86□□□□□ -0.83
SS18-216ENST00000580751 Q6ZRP5 223 aa9.86□□□□□ -0.83
SS18-216ENST00000580751 PLA2G2DQ9UNK4 145 aa9.86□□□□□ -0.83
SS18-216ENST00000580751 HINT1P49773 126 aaPredicted RBP9.85□□□□□ -0.83
SS18-216ENST00000580751 SOSTDC1Q6X4U4 206 aa9.85□□□□□ -0.83
SS18-216ENST00000580751 HERC2O95714 4834 aa9.85□□□□□ -0.83
SS18-216ENST00000580751 A0A087WYN8 130 aa9.84□□□□□ -0.83
SS18-216ENST00000580751 A0A1B0GWB2 263 aa9.84□□□□□ -0.83
SS18-216ENST00000580751 A4D1N5 150 aa9.84□□□□□ -0.83
SS18-216ENST00000580751 FXYD2P54710 66 aa9.84□□□□□ -0.83
SS18-216ENST00000580751 A0A0B4J2C4 111 aa9.83□□□□□ -0.84
SS18-216ENST00000580751 GAGE2EQ4V326 116 aa9.83□□□□□ -0.84
SS18-216ENST00000580751 PLAC8Q9NZF1 115 aa9.83□□□□□ -0.84
SS18-216ENST00000580751 GAGE2DQ9UEU5 116 aa9.83□□□□□ -0.84
SS18-216ENST00000580751 TRBV10-2A0A0K0K1G8 114 aa9.82□□□□□ -0.84
SS18-216ENST00000580751 LBHQ53QV2 105 aaPredicted RBP9.82□□□□□ -0.84
SS18-216ENST00000580751 SNHG12Q9BXW3 62 aa9.82□□□□□ -0.84
SS18-216ENST00000580751 EIF4EBP3O60516 100 aaPredicted RBP9.81□□□□□ -0.84
SS18-216ENST00000580751 TRAV13-2A0A0B4J235 113 aa9.8□□□□□ -0.84
SS18-216ENST00000580751 NPC2P61916 151 aa9.8□□□□□ -0.84
SS18-216ENST00000580751 Q8N1X5 172 aa9.8□□□□□ -0.84
SS18-216ENST00000580751 XAGE1AQ9HD64 81 aa9.8□□□□□ -0.84
SS18-216ENST00000580751 IGLV5-37A0A075B6J1 123 aa9.79□□□□□ -0.84
SS18-216ENST00000580751 SMR3BP02814 79 aaPredicted RBP9.79□□□□□ -0.84
SS18-216ENST00000580751 CFC1BP0CG36 223 aa9.79□□□□□ -0.84
SS18-216ENST00000580751 CFC1P0CG37 223 aa9.79□□□□□ -0.84
SS18-216ENST00000580751 COL5A1-AS1Q5SY13 56 aa9.79□□□□□ -0.84
SS18-216ENST00000580751 C9orf129Q5T035 196 aaKnown RBP9.79□□□□□ -0.84
SS18-216ENST00000580751 NHP2Q9NX24 153 aaKnown RBP9.79□□□□□ -0.84
SS18-216ENST00000580751 LINC00528Q8N1L1 170 aa9.78□□□□□ -0.84
SS18-216ENST00000580751 RAB37Q96AX2 223 aa9.78□□□□□ -0.84
SS18-216ENST00000580751 FAT1Q14517 4588 aa9.77□□□□□ -0.85
SS18-216ENST00000580751 VPREB1P12018 145 aa9.77□□□□□ -0.85
SS18-216ENST00000580751 BATFQ16520 125 aa9.77□□□□□ -0.85
SS18-216ENST00000580751 PRO1854Q9UHT4 67 aa9.77□□□□□ -0.85
SS18-216ENST00000580751 CBY1Q9Y3M2 126 aa9.77□□□□□ -0.85
SS18-216ENST00000580751 EPM2AB3EWF7 344 aa9.76□□□□□ -0.85
SS18-216ENST00000580751 FAM229AH3BQW9 127 aa9.76□□□□□ -0.85
SS18-216ENST00000580751 IGKV2-28A0A075B6P5 120 aa9.75□□□□□ -0.85
SS18-216ENST00000580751 A0A1W2PNN7 141 aa9.75□□□□□ -0.85
SS18-216ENST00000580751 M0R378 163 aa9.75□□□□□ -0.85
SS18-216ENST00000580751 IGKV2D-28P01615 120 aa9.75□□□□□ -0.85
SS18-216ENST00000580751 C7orf33Q8WU49 177 aa9.75□□□□□ -0.85
SS18-216ENST00000580751 TMEM126AQ9H061 195 aa9.75□□□□□ -0.85
SS18-216ENST00000580751 FAM168BA1KXE4 195 aa9.74□□□□□ -0.85
SS18-216ENST00000580751 Q5VSD8 79 aa9.74□□□□□ -0.85
SS18-216ENST00000580751 FAM19A5Q7Z5A7 132 aaPredicted RBP9.74□□□□□ -0.85
SS18-216ENST00000580751 NKAPP1Q8N9T2 125 aa9.73□□□□□ -0.85
SS18-216ENST00000580751 PLA2G1BP04054 148 aaKnown RBP9.72□□□□□ -0.85
SS18-216ENST00000580751 M0QXV9 152 aa9.71□□□□□ -0.86
SS18-216ENST00000580751 IGLV6-57P01721 117 aa9.71□□□□□ -0.86
SS18-216ENST00000580751 LINC00337Q8N6G1 96 aa9.71□□□□□ -0.86
SS18-216ENST00000580751 Q8NDZ9 215 aa9.71□□□□□ -0.86
SS18-216ENST00000580751 KRTAP17-1Q9BYP8 105 aa9.71□□□□□ -0.86
SS18-216ENST00000580751 SRRM2Q9UQ35 2752 aaKnown RBP9.71□□□□□ -0.86
SS18-216ENST00000580751 S100A7L2Q5SY68 101 aa9.7□□□□□ -0.86
SS18-216ENST00000580751 SERTAD4-AS1Q5TG53 156 aa9.7□□□□□ -0.86
SS18-216ENST00000580751 K7ERJ3 54 aa9.69□□□□□ -0.86
SS18-216ENST00000580751 RPL13AP40429 203 aaKnown RBP9.69□□□□□ -0.86
SS18-216ENST00000580751 RPL37AP61513 92 aaKnown RBP9.69□□□□□ -0.86
SS18-216ENST00000580751 PRR3P79522 188 aaKnown RBP9.69□□□□□ -0.86
SS18-216ENST00000580751 PHF5AQ7RTV0 110 aaKnown RBP9.69□□□□□ -0.86
SS18-216ENST00000580751 KRTAP7-1Q8IUC3 87 aa9.69□□□□□ -0.86
SS18-216ENST00000580751 C22orf24Q9Y442 160 aa9.69□□□□□ -0.86
SS18-216ENST00000580751 TAX1BP3O14907 124 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms