RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 CXCL5P42830 114 aa8.13□□□□□ -1.11
TRAF4-214ENST00000580073 KRTDAPP60985 99 aa8.13□□□□□ -1.11
TRAF4-214ENST00000580073 UBE2BP63146 152 aa8.13□□□□□ -1.11
TRAF4-214ENST00000580073 GAGE2EQ4V326 116 aa8.13□□□□□ -1.11
TRAF4-214ENST00000580073 GAGE2DQ9UEU5 116 aa8.13□□□□□ -1.11
TRAF4-214ENST00000580073 FAM19A5Q7Z5A7 132 aaPredicted RBP8.12□□□□□ -1.11
TRAF4-214ENST00000580073 M0QXV9 152 aa8.11□□□□□ -1.11
TRAF4-214ENST00000580073 PRR26Q8N8Z3 221 aa8.11□□□□□ -1.11
TRAF4-214ENST00000580073 A0A0U1RQV1 116 aa8.1□□□□□ -1.11
TRAF4-214ENST00000580073 LEPROTO15243 131 aa8.1□□□□□ -1.11
TRAF4-214ENST00000580073 XAGE1AQ9HD64 81 aa8.1□□□□□ -1.11
TRAF4-214ENST00000580073 S100A6P06703 90 aa8.09□□□□□ -1.11
TRAF4-214ENST00000580073 PFN2P35080 140 aa8.08□□□□□ -1.12
TRAF4-214ENST00000580073 KRTAP11-1Q8IUC1 163 aa8.08□□□□□ -1.12
TRAF4-214ENST00000580073 IGKV2D-26A0A0A0MRZ7 120 aa8.07□□□□□ -1.12
TRAF4-214ENST00000580073 S100A2P29034 98 aa8.07□□□□□ -1.12
TRAF4-214ENST00000580073 ATOH7Q8N100 152 aa8.07□□□□□ -1.12
TRAF4-214ENST00000580073 NDUFA12Q9UI09 145 aa8.07□□□□□ -1.12
TRAF4-214ENST00000580073 ERG28Q9UKR5 140 aa8.07□□□□□ -1.12
TRAF4-214ENST00000580073 E9PLD3 99 aa8.06□□□□□ -1.12
TRAF4-214ENST00000580073 J3QQQ9 107 aa8.06□□□□□ -1.12
TRAF4-214ENST00000580073 Q8NDZ9 215 aa8.06□□□□□ -1.12
TRAF4-214ENST00000580073 PLEKHB2Q96CS7 222 aa8.06□□□□□ -1.12
TRAF4-214ENST00000580073 A0A0U1RRA0 63 aa8.05□□□□□ -1.12
TRAF4-214ENST00000580073 ANKRD39Q53RE8 183 aa8.05□□□□□ -1.12
TRAF4-214ENST00000580073 TTTY13Q9BZ97 58 aa8.05□□□□□ -1.12
TRAF4-214ENST00000580073 SMIM13P0DJ93 91 aa8.04□□□□□ -1.12
TRAF4-214ENST00000580073 HERVK_113P61574 105 aa8.04□□□□□ -1.12
TRAF4-214ENST00000580073 PRR4Q16378 134 aa8.04□□□□□ -1.12
TRAF4-214ENST00000580073 SND1-IT1Q9HBX3 110 aa8.04□□□□□ -1.12
TRAF4-214ENST00000580073 LPAP08519 4548 aa8.03□□□□□ -1.12
TRAF4-214ENST00000580073 KRTAP1-4P0C5Y4 121 aa8.03□□□□□ -1.12
TRAF4-214ENST00000580073 MYMXA0A1B0GTQ4 84 aa8.02□□□□□ -1.13
TRAF4-214ENST00000580073 LINC00158P58513 81 aa8.02□□□□□ -1.13
TRAF4-214ENST00000580073 COX17Q14061 63 aa8.02□□□□□ -1.13
TRAF4-214ENST00000580073 LBHQ53QV2 105 aaPredicted RBP8.02□□□□□ -1.13
TRAF4-214ENST00000580073 TMA7Q9Y2S6 64 aaKnown RBP8.02□□□□□ -1.13
TRAF4-214ENST00000580073 C20orf202A1L168 122 aa8.01□□□□□ -1.13
TRAF4-214ENST00000580073 ZNF861PO60384 105 aa8.01□□□□□ -1.13
TRAF4-214ENST00000580073 LGALS3P17931 250 aaKnown RBP8.01□□□□□ -1.13
TRAF4-214ENST00000580073 HERV-K104P63124 156 aa8.01□□□□□ -1.13
TRAF4-214ENST00000580073 SFTA2Q6UW10 78 aa8.01□□□□□ -1.13
TRAF4-214ENST00000580073 C22orf24Q9Y442 160 aa8.01□□□□□ -1.13
TRAF4-214ENST00000580073 A0A0J9YXY3 114 aa8□□□□□ -1.13
TRAF4-214ENST00000580073 ADAMTSL4-AS1Q5T5F5 129 aa8□□□□□ -1.13
TRAF4-214ENST00000580073 DAND5Q8N907 189 aa8□□□□□ -1.13
TRAF4-214ENST00000580073 EIF4EBP3O60516 100 aaPredicted RBP7.99□□□□□ -1.13
TRAF4-214ENST00000580073 VPREB1P12018 145 aa7.99□□□□□ -1.13
TRAF4-214ENST00000580073 RPL28P46779 137 aaKnown RBP7.99□□□□□ -1.13
TRAF4-214ENST00000580073 NMUP48645 174 aa7.99□□□□□ -1.13
TRAF4-214ENST00000580073 MEIG1Q5JSS6 88 aa7.99□□□□□ -1.13
TRAF4-214ENST00000580073 MIR7-3HGQ8N6C7 128 aa7.99□□□□□ -1.13
TRAF4-214ENST00000580073 TP73-AS1Q9UF72 201 aa7.99□□□□□ -1.13
TRAF4-214ENST00000580073 IGLV5-37A0A075B6J1 123 aa7.98□□□□□ -1.13
TRAF4-214ENST00000580073 PCP2Q8IVA1 136 aa7.98□□□□□ -1.13
TRAF4-214ENST00000580073 LITAFQ99732 161 aa7.98□□□□□ -1.13
TRAF4-214ENST00000580073 SCGB1D1O95968 90 aa7.96□□□□□ -1.14
TRAF4-214ENST00000580073 SOSTDC1Q6X4U4 206 aa7.96□□□□□ -1.14
TRAF4-214ENST00000580073 LINC00167Q96N53 147 aa7.96□□□□□ -1.14
TRAF4-214ENST00000580073 GAGE10A6NGK3 116 aa7.95□□□□□ -1.14
TRAF4-214ENST00000580073 ZNF815PA8K554 130 aa7.95□□□□□ -1.14
TRAF4-214ENST00000580073 CRYGAP11844 174 aa7.95□□□□□ -1.14
TRAF4-214ENST00000580073 MRPL55Q7Z7F7 128 aaKnown RBP7.95□□□□□ -1.14
TRAF4-214ENST00000580073 LOC107984156A0A0G2JMH3 177 aa7.94□□□□□ -1.14
TRAF4-214ENST00000580073 RPL37AP8A6NKH3 93 aa7.94□□□□□ -1.14
TRAF4-214ENST00000580073 BCE1O60756 84 aa7.94□□□□□ -1.14
TRAF4-214ENST00000580073 ARL17AQ8IVW1 177 aa7.94□□□□□ -1.14
TRAF4-214ENST00000580073 NPC2P61916 151 aa7.93□□□□□ -1.14
TRAF4-214ENST00000580073 TYMSOSQ8TAI1 123 aa7.93□□□□□ -1.14
TRAF4-214ENST00000580073 LINC00587B1AMM8 73 aa7.92□□□□□ -1.14
TRAF4-214ENST00000580073 AKR1D1P51857 326 aa7.92□□□□□ -1.14
TRAF4-214ENST00000580073 JOSD1Q15040 202 aaPredicted RBP7.92□□□□□ -1.14
TRAF4-214ENST00000580073 BOD1L2Q8IYS8 172 aa7.92□□□□□ -1.14
TRAF4-214ENST00000580073 TIMM17BO60830 172 aa7.91□□□□□ -1.14
TRAF4-214ENST00000580073 TSPAN13O95857 204 aa7.9□□□□□ -1.14
TRAF4-214ENST00000580073 NKAPP1Q8N9T2 125 aa7.9□□□□□ -1.14
TRAF4-214ENST00000580073 IGKV2-28A0A075B6P5 120 aa7.89□□□□□ -1.15
TRAF4-214ENST00000580073 NCR3O14931 201 aa7.89□□□□□ -1.15
TRAF4-214ENST00000580073 IGKV2D-28P01615 120 aa7.89□□□□□ -1.15
TRAF4-214ENST00000580073 UBE2AP49459 152 aa7.89□□□□□ -1.15
TRAF4-214ENST00000580073 RPL24P83731 157 aaKnown RBP7.89□□□□□ -1.15
TRAF4-214ENST00000580073 PYY3Q5JQD4 70 aa7.89□□□□□ -1.15
TRAF4-214ENST00000580073 LINC00308Q8TCZ7 52 aa7.89□□□□□ -1.15
TRAF4-214ENST00000580073 FAM229BQ4G0N7 80 aa7.88□□□□□ -1.15
TRAF4-214ENST00000580073 A0A087X002 238 aa7.87□□□□□ -1.15
TRAF4-214ENST00000580073 TMEM238C9JI98 176 aa7.87□□□□□ -1.15
TRAF4-214ENST00000580073 M0R378 163 aa7.87□□□□□ -1.15
TRAF4-214ENST00000580073 CTAG1AP78358 180 aa7.87□□□□□ -1.15
TRAF4-214ENST00000580073 HSBP1L1C9JCN9 74 aa7.86□□□□□ -1.15
TRAF4-214ENST00000580073 SPANXDQ9BXN6 97 aa7.86□□□□□ -1.15
TRAF4-214ENST00000580073 SPANXCQ9NY87 97 aa7.86□□□□□ -1.15
TRAF4-214ENST00000580073 PAM16Q9Y3D7 125 aa7.86□□□□□ -1.15
TRAF4-214ENST00000580073 SCGB1D4Q6XE38 83 aa7.85□□□□□ -1.15
TRAF4-214ENST00000580073 TRBV10-3A0A0K0K1G6 114 aa7.84□□□□□ -1.15
TRAF4-214ENST00000580073 NDUFC2O95298 119 aa7.84□□□□□ -1.15
TRAF4-214ENST00000580073 COX8AP10176 69 aa7.84□□□□□ -1.15
TRAF4-214ENST00000580073 SPATA45Q537H7 98 aa7.84□□□□□ -1.15
TRAF4-214ENST00000580073 KRTAP13-1Q8IUC0 172 aa7.84□□□□□ -1.15
TRAF4-214ENST00000580073 LINC00304Q8N9R0 145 aa7.84□□□□□ -1.15
TRAF4-214ENST00000580073 C14orf144Q96I85 54 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms