RNA–Protein interactions for RNA: ENST00000579814.1

LIMD2-208, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 709 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-208ENST00000579814 PLNP26678 52 aa15.74■□□□□ 0.11
LIMD2-208ENST00000579814 HERV-K104P63124 156 aa15.74■□□□□ 0.11
LIMD2-208ENST00000579814 IGKV2-28A0A075B6P5 120 aa15.73■□□□□ 0.11
LIMD2-208ENST00000579814 IGKV2D-28P01615 120 aa15.73■□□□□ 0.11
LIMD2-208ENST00000579814 MEIG1Q5JSS6 88 aa15.73■□□□□ 0.11
LIMD2-208ENST00000579814 LINC00587B1AMM8 73 aa15.72■□□□□ 0.11
LIMD2-208ENST00000579814 NDUFA12Q9UI09 145 aa15.72■□□□□ 0.11
LIMD2-208ENST00000579814 SMIM13P0DJ93 91 aa15.71■□□□□ 0.11
LIMD2-208ENST00000579814 UBE2AP49459 152 aa15.71■□□□□ 0.11
LIMD2-208ENST00000579814 MYMXA0A1B0GTQ4 84 aa15.7■□□□□ 0.1
LIMD2-208ENST00000579814 DPM2O94777 84 aa15.7■□□□□ 0.1
LIMD2-208ENST00000579814 RPL13AP40429 203 aaKnown RBP15.7■□□□□ 0.1
LIMD2-208ENST00000579814 MAP1LC3CQ9BXW4 147 aa15.7■□□□□ 0.1
LIMD2-208ENST00000579814 HERVK_113P61574 105 aa15.68■□□□□ 0.1
LIMD2-208ENST00000579814 PLEKHB2Q96CS7 222 aa15.68■□□□□ 0.1
LIMD2-208ENST00000579814 LEPROTO15243 131 aa15.67■□□□□ 0.1
LIMD2-208ENST00000579814 Q8NDZ9 215 aa15.67■□□□□ 0.1
LIMD2-208ENST00000579814 IGKCP01834 107 aa15.66■□□□□ 0.1
LIMD2-208ENST00000579814 PMCHL2Q9BQD1 86 aa15.66■□□□□ 0.1
LIMD2-208ENST00000579814 HIST1H2BKO60814 126 aa15.65■□□□□ 0.1
LIMD2-208ENST00000579814 HIST1H2BJP06899 126 aa15.65■□□□□ 0.1
LIMD2-208ENST00000579814 HIST1H2BOP23527 126 aa15.65■□□□□ 0.1
LIMD2-208ENST00000579814 HIST1H2BBP33778 126 aa15.65■□□□□ 0.1
LIMD2-208ENST00000579814 HIST1H2BDP58876 126 aa15.65■□□□□ 0.1
LIMD2-208ENST00000579814 HIST1H2BCP62807 126 aa15.65■□□□□ 0.1
LIMD2-208ENST00000579814 HIST2H2BEQ16778 126 aa15.65■□□□□ 0.1
LIMD2-208ENST00000579814 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.65■□□□□ 0.1
LIMD2-208ENST00000579814 MIR7-3HGQ8N6C7 128 aa15.65■□□□□ 0.1
LIMD2-208ENST00000579814 HIST1H2BHQ93079 126 aa15.65■□□□□ 0.1
LIMD2-208ENST00000579814 HIST1H2BNQ99877 126 aa15.65■□□□□ 0.1
LIMD2-208ENST00000579814 HIST1H2BMQ99879 126 aa15.65■□□□□ 0.1
LIMD2-208ENST00000579814 KRTAP13-1Q8IUC0 172 aa15.64■□□□□ 0.09
LIMD2-208ENST00000579814 TMEM126AQ9H061 195 aa15.64■□□□□ 0.09
LIMD2-208ENST00000579814 TMEM238C9JI98 176 aa15.63■□□□□ 0.09
LIMD2-208ENST00000579814 M0R378 163 aa15.63■□□□□ 0.09
LIMD2-208ENST00000579814 BOD1L2Q8IYS8 172 aa15.63■□□□□ 0.09
LIMD2-208ENST00000579814 J3QQQ9 107 aa15.62■□□□□ 0.09
LIMD2-208ENST00000579814 TSPEAR-AS2P59090 65 aa15.62■□□□□ 0.09
LIMD2-208ENST00000579814 FAM19A1Q7Z5A9 133 aa15.62■□□□□ 0.09
LIMD2-208ENST00000579814 LGALS3P17931 250 aaKnown RBP15.59■□□□□ 0.09
LIMD2-208ENST00000579814 NMUP48645 174 aa15.59■□□□□ 0.09
LIMD2-208ENST00000579814 CRYGAP11844 174 aa15.58■□□□□ 0.08
LIMD2-208ENST00000579814 PRLHP81277 87 aa15.58■□□□□ 0.08
LIMD2-208ENST00000579814 SYS1-DBNDD2H3BUS1 97 aa15.56■□□□□ 0.08
LIMD2-208ENST00000579814 IGKV2D-26A0A0A0MRZ7 120 aa15.55■□□□□ 0.08
LIMD2-208ENST00000579814 UBR4Q5T4S7 5183 aa15.54■□□□□ 0.08
LIMD2-208ENST00000579814 NCR3O14931 201 aa15.53■□□□□ 0.08
LIMD2-208ENST00000579814 A0A087X002 238 aa15.52■□□□□ 0.08
LIMD2-208ENST00000579814 ANAPC11Q9NYG5 84 aa15.52■□□□□ 0.08
LIMD2-208ENST00000579814 E9PLD3 99 aa15.51■□□□□ 0.07
LIMD2-208ENST00000579814 DAND5Q8N907 189 aa15.51■□□□□ 0.07
LIMD2-208ENST00000579814 TYMSOSQ8TAI1 123 aa15.51■□□□□ 0.07
LIMD2-208ENST00000579814 LOC107984156A0A0G2JMH3 177 aa15.5■□□□□ 0.07
LIMD2-208ENST00000579814 ARL17AQ8IVW1 177 aa15.5■□□□□ 0.07
LIMD2-208ENST00000579814 PRYO14603 147 aa15.49■□□□□ 0.07
LIMD2-208ENST00000579814 FAM229BQ4G0N7 80 aa15.49■□□□□ 0.07
LIMD2-208ENST00000579814 PET117Q6UWS5 81 aa15.49■□□□□ 0.07
LIMD2-208ENST00000579814 MIEN1Q9BRT3 115 aa15.48■□□□□ 0.07
LIMD2-208ENST00000579814 S100A12P80511 92 aa15.47■□□□□ 0.07
LIMD2-208ENST00000579814 LINC01545Q5VT33 79 aa15.47■□□□□ 0.07
LIMD2-208ENST00000579814 HIGD2AQ9BW72 106 aa15.47■□□□□ 0.07
LIMD2-208ENST00000579814 KCNQ1DNQ9H478 68 aa15.47■□□□□ 0.07
LIMD2-208ENST00000579814 COA6Q5JTJ3 125 aaKnown RBP15.46■□□□□ 0.07
LIMD2-208ENST00000579814 LRP2P98164 4655 aa15.46■□□□□ 0.07
LIMD2-208ENST00000579814 TRBV10-3A0A0K0K1G6 114 aa15.44■□□□□ 0.06
LIMD2-208ENST00000579814 A0A0J9YXY3 114 aa15.43■□□□□ 0.06
LIMD2-208ENST00000579814 TRBV10-2A0A0K0K1G8 114 aa15.43■□□□□ 0.06
LIMD2-208ENST00000579814 LINC00337Q8N6G1 96 aa15.43■□□□□ 0.06
LIMD2-208ENST00000579814 SPRR1AP35321 89 aa15.42■□□□□ 0.06
LIMD2-208ENST00000579814 ETDCA0A1B0GVM5 59 aa15.41■□□□□ 0.06
LIMD2-208ENST00000579814 C3orf79P0CE67 100 aa15.41■□□□□ 0.06
LIMD2-208ENST00000579814 KRTAP13-2Q52LG2 175 aa15.41■□□□□ 0.06
LIMD2-208ENST00000579814 NDUFC2O95298 119 aa15.4■□□□□ 0.06
LIMD2-208ENST00000579814 TSPAN13O95857 204 aa15.4■□□□□ 0.06
LIMD2-208ENST00000579814 SPANXB1Q9NS25 103 aaPredicted RBP15.4■□□□□ 0.06
LIMD2-208ENST00000579814 DDTP30046 118 aa15.39■□□□□ 0.05
LIMD2-208ENST00000579814 KRTDAPP60985 99 aa15.39■□□□□ 0.05
LIMD2-208ENST00000579814 ADAMTSL4-AS1Q5T5F5 129 aa15.38■□□□□ 0.05
LIMD2-208ENST00000579814 ZNF706Q9Y5V0 76 aaPredicted RBP15.37■□□□□ 0.05
LIMD2-208ENST00000579814 KRTAP4-16G5E9R7 235 aaPredicted RBP15.36■□□□□ 0.05
LIMD2-208ENST00000579814 PRR4Q16378 134 aa15.36■□□□□ 0.05
LIMD2-208ENST00000579814 S100A7L2Q5SY68 101 aa15.36■□□□□ 0.05
LIMD2-208ENST00000579814 NPC2P61916 151 aa15.35■□□□□ 0.05
LIMD2-208ENST00000579814 SPRR4Q96PI1 79 aa15.35■□□□□ 0.05
LIMD2-208ENST00000579814 C20orf202A1L168 122 aa15.34■□□□□ 0.05
LIMD2-208ENST00000579814 SOSTDC1Q6X4U4 206 aa15.34■□□□□ 0.05
LIMD2-208ENST00000579814 SMCR5Q8TEV8 140 aa15.33■□□□□ 0.04
LIMD2-208ENST00000579814 ZNF815PA8K554 130 aa15.32■□□□□ 0.04
LIMD2-208ENST00000579814 TIMM17BO60830 172 aa15.32■□□□□ 0.04
LIMD2-208ENST00000579814 LINC00304Q8N9R0 145 aa15.32■□□□□ 0.04
LIMD2-208ENST00000579814 B5MCH6 92 aa15.3■□□□□ 0.04
LIMD2-208ENST00000579814 EIF4EBP3O60516 100 aaPredicted RBP15.3■□□□□ 0.04
LIMD2-208ENST00000579814 IGLV6-57P01721 117 aa15.3■□□□□ 0.04
LIMD2-208ENST00000579814 S100A1P23297 94 aa15.29■□□□□ 0.04
LIMD2-208ENST00000579814 LITAFQ99732 161 aa15.29■□□□□ 0.04
LIMD2-208ENST00000579814 C3orf22Q8N5N4 141 aa15.27■□□□□ 0.04
LIMD2-208ENST00000579814 LINC00308Q8TCZ7 52 aa15.27■□□□□ 0.04
LIMD2-208ENST00000579814 TTTY13Q9BZ97 58 aa15.26■□□□□ 0.03
LIMD2-208ENST00000579814 TRAV23DV6A0A075B6W5 121 aa15.25■□□□□ 0.03
LIMD2-208ENST00000579814 AKR1D1P51857 326 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms