RNA–Protein interactions for RNA: ENST00000579122.1

CDKN2A-213, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3 BASIC

Gene CDKN2A, Length 666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-213ENST00000579122 GAGE2EQ4V326 116 aa11.55□□□□□ -0.56
CDKN2A-213ENST00000579122 GAGE2DQ9UEU5 116 aa11.55□□□□□ -0.56
CDKN2A-213ENST00000579122 SPINK8P0C7L1 97 aa11.54□□□□□ -0.56
CDKN2A-213ENST00000579122 KRTAP7-1Q8IUC3 87 aa11.54□□□□□ -0.56
CDKN2A-213ENST00000579122 LINC01561Q8N1V8 128 aa11.54□□□□□ -0.56
CDKN2A-213ENST00000579122 M0QXV9 152 aa11.52□□□□□ -0.57
CDKN2A-213ENST00000579122 RPL13AP40429 203 aaKnown RBP11.52□□□□□ -0.57
CDKN2A-213ENST00000579122 HERVK_113P61574 105 aa11.52□□□□□ -0.57
CDKN2A-213ENST00000579122 UBE2BP63146 152 aa11.52□□□□□ -0.57
CDKN2A-213ENST00000579122 KIAA0087Q14695 138 aa11.52□□□□□ -0.57
CDKN2A-213ENST00000579122 SMIM1B2RUZ4 78 aa11.51□□□□□ -0.57
CDKN2A-213ENST00000579122 HSBP1L1C9JCN9 74 aa11.51□□□□□ -0.57
CDKN2A-213ENST00000579122 TRBV30A0A0K0K1B3 111 aa11.5□□□□□ -0.57
CDKN2A-213ENST00000579122 SMIM6P0DI80 62 aa11.5□□□□□ -0.57
CDKN2A-213ENST00000579122 PRR4Q16378 134 aa11.5□□□□□ -0.57
CDKN2A-213ENST00000579122 NDUFC2-KCTD14E9PQ53 114 aa11.49□□□□□ -0.57
CDKN2A-213ENST00000579122 ANKRD39Q53RE8 183 aa11.49□□□□□ -0.57
CDKN2A-213ENST00000579122 IGLV5-39A0A0G2JS06 123 aa11.48□□□□□ -0.57
CDKN2A-213ENST00000579122 E9PLD3 99 aa11.48□□□□□ -0.57
CDKN2A-213ENST00000579122 VAMP8Q9BV40 100 aa11.48□□□□□ -0.57
CDKN2A-213ENST00000579122 LEPROTO15243 131 aa11.47□□□□□ -0.57
CDKN2A-213ENST00000579122 C9orf129Q5T035 196 aaKnown RBP11.47□□□□□ -0.57
CDKN2A-213ENST00000579122 PLEKHB2Q96CS7 222 aa11.46□□□□□ -0.57
CDKN2A-213ENST00000579122 TOMM7Q9P0U1 55 aa11.46□□□□□ -0.57
CDKN2A-213ENST00000579122 PAM16Q9Y3D7 125 aa11.46□□□□□ -0.57
CDKN2A-213ENST00000579122 IGKV2D-26A0A0A0MRZ7 120 aa11.45□□□□□ -0.58
CDKN2A-213ENST00000579122 PRSS2P07478 247 aa11.45□□□□□ -0.58
CDKN2A-213ENST00000579122 C2orf82Q6UX34 121 aa11.45□□□□□ -0.58
CDKN2A-213ENST00000579122 COX7B2Q8TF08 81 aa11.45□□□□□ -0.58
CDKN2A-213ENST00000579122 ZNF861PO60384 105 aa11.44□□□□□ -0.58
CDKN2A-213ENST00000579122 S100A12P80511 92 aa11.44□□□□□ -0.58
CDKN2A-213ENST00000579122 SPATA45Q537H7 98 aa11.44□□□□□ -0.58
CDKN2A-213ENST00000579122 A0A0U1RQV1 116 aa11.43□□□□□ -0.58
CDKN2A-213ENST00000579122 J3QQQ9 107 aa11.43□□□□□ -0.58
CDKN2A-213ENST00000579122 NMUP48645 174 aa11.43□□□□□ -0.58
CDKN2A-213ENST00000579122 TSPEAR-AS2P59090 65 aa11.43□□□□□ -0.58
CDKN2A-213ENST00000579122 C6orf226Q5I0X4 101 aa11.43□□□□□ -0.58
CDKN2A-213ENST00000579122 Q8IZM0 81 aa11.43□□□□□ -0.58
CDKN2A-213ENST00000579122 LGALS3P17931 250 aaKnown RBP11.42□□□□□ -0.58
CDKN2A-213ENST00000579122 C12orf57Q99622 126 aa11.42□□□□□ -0.58
CDKN2A-213ENST00000579122 LINC00518Q8N0U6 118 aa11.41□□□□□ -0.58
CDKN2A-213ENST00000579122 CKS1BP61024 79 aa11.39□□□□□ -0.59
CDKN2A-213ENST00000579122 PCP2Q8IVA1 136 aa11.39□□□□□ -0.59
CDKN2A-213ENST00000579122 TTTY13Q9BZ97 58 aa11.39□□□□□ -0.59
CDKN2A-213ENST00000579122 NDUFA12Q9UI09 145 aa11.38□□□□□ -0.59
CDKN2A-213ENST00000579122 C22orf24Q9Y442 160 aa11.38□□□□□ -0.59
CDKN2A-213ENST00000579122 LBHQ53QV2 105 aaPredicted RBP11.37□□□□□ -0.59
CDKN2A-213ENST00000579122 C14orf144Q96I85 54 aa11.37□□□□□ -0.59
CDKN2A-213ENST00000579122 MYMXA0A1B0GTQ4 84 aa11.36□□□□□ -0.59
CDKN2A-213ENST00000579122 ZNF815PA8K554 130 aa11.36□□□□□ -0.59
CDKN2A-213ENST00000579122 COX8AP10176 69 aa11.36□□□□□ -0.59
CDKN2A-213ENST00000579122 CXCL5P42830 114 aa11.36□□□□□ -0.59
CDKN2A-213ENST00000579122 ZNF625Q96I27 306 aaPredicted RBP11.36□□□□□ -0.59
CDKN2A-213ENST00000579122 TSPAN13O95857 204 aa11.35□□□□□ -0.59
CDKN2A-213ENST00000579122 FAT4Q6V0I7 4981 aa11.34□□□□□ -0.59
CDKN2A-213ENST00000579122 SFTA2Q6UW10 78 aa11.34□□□□□ -0.59
CDKN2A-213ENST00000579122 BOD1L2Q8IYS8 172 aa11.33□□□□□ -0.6
CDKN2A-213ENST00000579122 KRTAP9-2Q9BYQ4 174 aa11.33□□□□□ -0.6
CDKN2A-213ENST00000579122 XAGE1AQ9HD64 81 aa11.33□□□□□ -0.6
CDKN2A-213ENST00000579122 TP73-AS1Q9UF72 201 aa11.33□□□□□ -0.6
CDKN2A-213ENST00000579122 A0A087X002 238 aa11.32□□□□□ -0.6
CDKN2A-213ENST00000579122 DLEU1O43261 78 aa11.32□□□□□ -0.6
CDKN2A-213ENST00000579122 RPL28P46779 137 aaKnown RBP11.32□□□□□ -0.6
CDKN2A-213ENST00000579122 HERV-K104P63124 156 aa11.32□□□□□ -0.6
CDKN2A-213ENST00000579122 SLC25A34Q6PIV7 304 aa11.32□□□□□ -0.6
CDKN2A-213ENST00000579122 PRO1933Q9H354 126 aa11.32□□□□□ -0.6
CDKN2A-213ENST00000579122 MUC17Q685J3 4493 aa11.31□□□□□ -0.6
CDKN2A-213ENST00000579122 BCE1O60756 84 aa11.31□□□□□ -0.6
CDKN2A-213ENST00000579122 A0A0J9YXY3 114 aa11.3□□□□□ -0.6
CDKN2A-213ENST00000579122 CRYGAP11844 174 aa11.3□□□□□ -0.6
CDKN2A-213ENST00000579122 MRPL55Q7Z7F7 128 aaKnown RBP11.3□□□□□ -0.6
CDKN2A-213ENST00000579122 SCGB1D4Q6XE38 83 aa11.29□□□□□ -0.6
CDKN2A-213ENST00000579122 TYMSOSQ8TAI1 123 aa11.29□□□□□ -0.6
CDKN2A-213ENST00000579122 MEIG1Q5JSS6 88 aa11.28□□□□□ -0.6
CDKN2A-213ENST00000579122 UQCR10Q9UDW1 63 aa11.28□□□□□ -0.6
CDKN2A-213ENST00000579122 ERG28Q9UKR5 140 aa11.27□□□□□ -0.61
CDKN2A-213ENST00000579122 LINC00587B1AMM8 73 aa11.26□□□□□ -0.61
CDKN2A-213ENST00000579122 PFN2P35080 140 aa11.26□□□□□ -0.61
CDKN2A-213ENST00000579122 A0A0U1RRA0 63 aa11.25□□□□□ -0.61
CDKN2A-213ENST00000579122 SMIM13P0DJ93 91 aa11.25□□□□□ -0.61
CDKN2A-213ENST00000579122 LINC00158P58513 81 aa11.25□□□□□ -0.61
CDKN2A-213ENST00000579122 LCE2AQ5TA79 106 aaPredicted RBP11.25□□□□□ -0.61
CDKN2A-213ENST00000579122 MIEN1Q9BRT3 115 aa11.25□□□□□ -0.61
CDKN2A-213ENST00000579122 TSTD3H0UI37 97 aa11.24□□□□□ -0.61
CDKN2A-213ENST00000579122 TIMM17BO60830 172 aa11.24□□□□□ -0.61
CDKN2A-213ENST00000579122 COX17Q14061 63 aa11.24□□□□□ -0.61
CDKN2A-213ENST00000579122 LINC00167Q96N53 147 aa11.24□□□□□ -0.61
CDKN2A-213ENST00000579122 RPL37AP8A6NKH3 93 aa11.22□□□□□ -0.61
CDKN2A-213ENST00000579122 ADAMTSL4-AS1Q5T5F5 129 aa11.22□□□□□ -0.61
CDKN2A-213ENST00000579122 C2orf91Q6ZV80 131 aa11.22□□□□□ -0.61
CDKN2A-213ENST00000579122 LITAFQ99732 161 aa11.22□□□□□ -0.61
CDKN2A-213ENST00000579122 TMEM238C9JI98 176 aa11.21□□□□□ -0.61
CDKN2A-213ENST00000579122 ANAPC11Q9NYG5 84 aa11.21□□□□□ -0.61
CDKN2A-213ENST00000579122 HIGD1BQ9P298 99 aa11.21□□□□□ -0.61
CDKN2A-213ENST00000579122 KRTAP13-2Q52LG2 175 aa11.2□□□□□ -0.62
CDKN2A-213ENST00000579122 KRTAP13-1Q8IUC0 172 aa11.2□□□□□ -0.62
CDKN2A-213ENST00000579122 DAND5Q8N907 189 aa11.2□□□□□ -0.62
CDKN2A-213ENST00000579122 IGLV5-37A0A075B6J1 123 aa11.19□□□□□ -0.62
CDKN2A-213ENST00000579122 FAM229BQ4G0N7 80 aa11.19□□□□□ -0.62
CDKN2A-213ENST00000579122 MIR7-3HGQ8N6C7 128 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms