RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 COMMD7Q86VX2 200 aa5.14□□□□□ -1.59
GGA3-207ENST00000578896 BAGE3Q86Y29 109 aa5.14□□□□□ -1.59
GGA3-207ENST00000578896 CBLN2Q8IUK8 224 aa5.14□□□□□ -1.59
GGA3-207ENST00000578896 C18orf32Q8TCD1 76 aa5.14□□□□□ -1.59
GGA3-207ENST00000578896 CDIP1Q9H305 208 aa5.14□□□□□ -1.59
GGA3-207ENST00000578896 HBDP02042 147 aa5.13□□□□□ -1.59
GGA3-207ENST00000578896 LINC00614P0C842 121 aa5.13□□□□□ -1.59
GGA3-207ENST00000578896 LINC00158P58513 81 aa5.13□□□□□ -1.59
GGA3-207ENST00000578896 RPL24P83731 157 aaKnown RBP5.13□□□□□ -1.59
GGA3-207ENST00000578896 COX19Q49B96 90 aa5.13□□□□□ -1.59
GGA3-207ENST00000578896 LCE2AQ5TA79 106 aaPredicted RBP5.13□□□□□ -1.59
GGA3-207ENST00000578896 TRAPPC1Q9Y5R8 145 aa5.13□□□□□ -1.59
GGA3-207ENST00000578896 COX17Q14061 63 aa5.11□□□□□ -1.59
GGA3-207ENST00000578896 C10orf91Q5T1B1 145 aa5.11□□□□□ -1.59
GGA3-207ENST00000578896 DAND5Q8N907 189 aa5.11□□□□□ -1.59
GGA3-207ENST00000578896 PPDPFQ9H3Y8 114 aa5.11□□□□□ -1.59
GGA3-207ENST00000578896 CHTOPQ9Y3Y2 248 aaKnown RBP5.11□□□□□ -1.59
GGA3-207ENST00000578896 SMIM13P0DJ93 91 aa5.1□□□□□ -1.59
GGA3-207ENST00000578896 TPRXLQ17RH7 258 aa5.1□□□□□ -1.59
GGA3-207ENST00000578896 SPRR4Q96PI1 79 aa5.1□□□□□ -1.59
GGA3-207ENST00000578896 TMEM223A0PJW6 202 aa5.09□□□□□ -1.59
GGA3-207ENST00000578896 NCR3O14931 201 aa5.09□□□□□ -1.59
GGA3-207ENST00000578896 RHEBQ15382 184 aa5.09□□□□□ -1.59
GGA3-207ENST00000578896 BOD1L2Q8IYS8 172 aa5.08□□□□□ -1.6
GGA3-207ENST00000578896 Q8NBF4 154 aa5.08□□□□□ -1.6
GGA3-207ENST00000578896 SMCR5Q8TEV8 140 aa5.08□□□□□ -1.6
GGA3-207ENST00000578896 ATP6V1G1O75348 118 aa5.07□□□□□ -1.6
GGA3-207ENST00000578896 APOC3P02656 99 aa5.07□□□□□ -1.6
GGA3-207ENST00000578896 MEIG1Q5JSS6 88 aa5.07□□□□□ -1.6
GGA3-207ENST00000578896 MIR7-3HGQ8N6C7 128 aa5.07□□□□□ -1.6
GGA3-207ENST00000578896 TRBV10-3A0A0K0K1G6 114 aa5.06□□□□□ -1.6
GGA3-207ENST00000578896 C4orf48Q5BLP8 95 aa5.06□□□□□ -1.6
GGA3-207ENST00000578896 IFI27L1Q96BM0 104 aa5.06□□□□□ -1.6
GGA3-207ENST00000578896 ETDCA0A1B0GVM5 59 aa5.05□□□□□ -1.6
GGA3-207ENST00000578896 H0Y8G0 127 aa5.05□□□□□ -1.6
GGA3-207ENST00000578896 PRYO14603 147 aa5.05□□□□□ -1.6
GGA3-207ENST00000578896 ERC2-IT1O76042 136 aa5.05□□□□□ -1.6
GGA3-207ENST00000578896 GAGE2AQ6NT46 116 aa5.05□□□□□ -1.6
GGA3-207ENST00000578896 SPAG11AQ6PDA7 123 aa5.05□□□□□ -1.6
GGA3-207ENST00000578896 SFTA2Q6UW10 78 aa5.05□□□□□ -1.6
GGA3-207ENST00000578896 FAM19A2Q8N3H0 131 aa5.05□□□□□ -1.6
GGA3-207ENST00000578896 TRAV12-1A0A0B4J245 112 aa5.04□□□□□ -1.6
GGA3-207ENST00000578896 KRTAP4-16G5E9R7 235 aaPredicted RBP5.04□□□□□ -1.6
GGA3-207ENST00000578896 SPRR1AP35321 89 aa5.04□□□□□ -1.6
GGA3-207ENST00000578896 KRTAP13-3Q3SY46 172 aa5.04□□□□□ -1.6
GGA3-207ENST00000578896 LINC00337Q8N6G1 96 aa5.04□□□□□ -1.6
GGA3-207ENST00000578896 KRTAP4-1Q9BYQ7 146 aa5.04□□□□□ -1.6
GGA3-207ENST00000578896 KCNQ1DNQ9H478 68 aa5.04□□□□□ -1.6
GGA3-207ENST00000578896 NDUFA12Q9UI09 145 aa5.04□□□□□ -1.6
GGA3-207ENST00000578896 ZNF706Q9Y5V0 76 aaPredicted RBP5.04□□□□□ -1.6
GGA3-207ENST00000578896 IGLV9-49A0A0B4J1Y8 123 aa5.03□□□□□ -1.6
GGA3-207ENST00000578896 TSPEAR-AS2P59090 65 aa5.03□□□□□ -1.6
GGA3-207ENST00000578896 B5MCH6 92 aa5.02□□□□□ -1.61
GGA3-207ENST00000578896 CTAG1AP78358 180 aa5.02□□□□□ -1.61
GGA3-207ENST00000578896 MOBPQ13875 183 aa5.02□□□□□ -1.61
GGA3-207ENST00000578896 FP248Q71RG6 208 aaPredicted RBP5.02□□□□□ -1.61
GGA3-207ENST00000578896 CHCHD1Q96BP2 118 aaKnown RBP5.02□□□□□ -1.61
GGA3-207ENST00000578896 YPEL4Q96NS1 127 aa5.02□□□□□ -1.61
GGA3-207ENST00000578896 KRTAP9-6A0A140TA67 174 aa5.01□□□□□ -1.61
GGA3-207ENST00000578896 SNAPINO95295 136 aa5.01□□□□□ -1.61
GGA3-207ENST00000578896 HERV-K104P63124 156 aa5.01□□□□□ -1.61
GGA3-207ENST00000578896 PMCHL2Q9BQD1 86 aa5.01□□□□□ -1.61
GGA3-207ENST00000578896 Q9BRP9 147 aa5.01□□□□□ -1.61
GGA3-207ENST00000578896 KRTAP3-3Q9BYR6 98 aa5.01□□□□□ -1.61
GGA3-207ENST00000578896 KRTAP3-2Q9BYR7 98 aa5.01□□□□□ -1.61
GGA3-207ENST00000578896 MYMXA0A1B0GTQ4 84 aa5□□□□□ -1.61
GGA3-207ENST00000578896 HSBP1O75506 76 aa5□□□□□ -1.61
GGA3-207ENST00000578896 DDTP30046 118 aa5□□□□□ -1.61
GGA3-207ENST00000578896 LINC00483Q53H64 154 aa5□□□□□ -1.61
GGA3-207ENST00000578896 SVBPQ8N300 66 aa5□□□□□ -1.61
GGA3-207ENST00000578896 LEPROTO15243 131 aa4.99□□□□□ -1.61
GGA3-207ENST00000578896 SPINK1P00995 79 aa4.99□□□□□ -1.61
GGA3-207ENST00000578896 LINC00310P59036 64 aa4.99□□□□□ -1.61
GGA3-207ENST00000578896 NPC2P61916 151 aa4.99□□□□□ -1.61
GGA3-207ENST00000578896 ASB16-AS1Q495Z4 193 aa4.99□□□□□ -1.61
GGA3-207ENST00000578896 EIF4EBP3O60516 100 aaPredicted RBP4.98□□□□□ -1.61
GGA3-207ENST00000578896 FABP4P15090 132 aa4.98□□□□□ -1.61
GGA3-207ENST00000578896 NDUFA5Q16718 116 aa4.98□□□□□ -1.61
GGA3-207ENST00000578896 Q8N377 158 aa4.98□□□□□ -1.61
GGA3-207ENST00000578896 ST20-AS1Q8NBB2 130 aa4.98□□□□□ -1.61
GGA3-207ENST00000578896 MAP1LC3CQ9BXW4 147 aa4.98□□□□□ -1.61
GGA3-207ENST00000578896 LINC00587B1AMM8 73 aa4.97□□□□□ -1.61
GGA3-207ENST00000578896 J3QQQ9 107 aa4.97□□□□□ -1.61
GGA3-207ENST00000578896 SERF1AO75920 110 aa4.97□□□□□ -1.61
GGA3-207ENST00000578896 LEPROTL1O95214 131 aa4.97□□□□□ -1.61
GGA3-207ENST00000578896 TRGC2P03986 189 aa4.97□□□□□ -1.61
GGA3-207ENST00000578896 SOSTDC1Q6X4U4 206 aa4.97□□□□□ -1.61
GGA3-207ENST00000578896 LOC107984156A0A0G2JMH3 177 aa4.96□□□□□ -1.62
GGA3-207ENST00000578896 LINC01547P58512 204 aaPredicted RBP4.96□□□□□ -1.62
GGA3-207ENST00000578896 S100A12P80511 92 aa4.96□□□□□ -1.62
GGA3-207ENST00000578896 S100A7L2Q5SY68 101 aa4.96□□□□□ -1.62
GGA3-207ENST00000578896 ADAMTSL4-AS1Q5T5F5 129 aa4.96□□□□□ -1.62
GGA3-207ENST00000578896 C9orf153Q5TBE3 101 aa4.96□□□□□ -1.62
GGA3-207ENST00000578896 Q6ZRX8 168 aa4.96□□□□□ -1.62
GGA3-207ENST00000578896 SSBP3-AS1Q7Z2R9 100 aa4.96□□□□□ -1.62
GGA3-207ENST00000578896 ARL17AQ8IVW1 177 aa4.96□□□□□ -1.62
GGA3-207ENST00000578896 FSIP2Q5CZC0 6907 aa4.96□□□□□ -1.62
GGA3-207ENST00000578896 TRBV10-2A0A0K0K1G8 114 aa4.95□□□□□ -1.62
GGA3-207ENST00000578896 DPM2O94777 84 aa4.95□□□□□ -1.62
GGA3-207ENST00000578896 IGLV6-57P01721 117 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms