RNA–Protein interactions for RNA: ENST00000578875.5

PPP4R1-211, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-211ENST00000578875 UBE2D1P51668 147 aa4.66□□□□□ -1.66
PPP4R1-211ENST00000578875 KRTAP19-2Q3LHN2 52 aa4.66□□□□□ -1.66
PPP4R1-211ENST00000578875 BVES-AS1Q5T3Y7 98 aa4.66□□□□□ -1.66
PPP4R1-211ENST00000578875 SCGB1D4Q6XE38 83 aa4.66□□□□□ -1.66
PPP4R1-211ENST00000578875 KRTAP11-1Q8IUC1 163 aa4.66□□□□□ -1.66
PPP4R1-211ENST00000578875 LINC00469Q8N7U9 141 aa4.66□□□□□ -1.66
PPP4R1-211ENST00000578875 C15orf56Q8N910 161 aa4.66□□□□□ -1.66
PPP4R1-211ENST00000578875 DIRC1Q969H9 104 aa4.66□□□□□ -1.66
PPP4R1-211ENST00000578875 PLEKHB2Q96CS7 222 aa4.66□□□□□ -1.66
PPP4R1-211ENST00000578875 HIGD1BQ9P298 99 aa4.66□□□□□ -1.66
PPP4R1-211ENST00000578875 TRAV13-1A0A0B4J241 112 aa4.65□□□□□ -1.67
PPP4R1-211ENST00000578875 IGKV3OR2-268A0A0C4DH90 116 aa4.65□□□□□ -1.67
PPP4R1-211ENST00000578875 TMEM223A0PJW6 202 aa4.65□□□□□ -1.67
PPP4R1-211ENST00000578875 A6NDN8 102 aa4.65□□□□□ -1.67
PPP4R1-211ENST00000578875 H0Y9J4 135 aa4.65□□□□□ -1.67
PPP4R1-211ENST00000578875 J3QQQ9 107 aa4.65□□□□□ -1.67
PPP4R1-211ENST00000578875 IGLV7-43P04211 117 aa4.65□□□□□ -1.67
PPP4R1-211ENST00000578875 PTTG1IPP53801 180 aa4.65□□□□□ -1.67
PPP4R1-211ENST00000578875 RBX1P62877 108 aa4.65□□□□□ -1.67
PPP4R1-211ENST00000578875 HERVK_113P63121 156 aa4.65□□□□□ -1.67
PPP4R1-211ENST00000578875 SEC11AP67812 179 aa4.65□□□□□ -1.67
PPP4R1-211ENST00000578875 ORAOV1Q8WV07 137 aa4.65□□□□□ -1.67
PPP4R1-211ENST00000578875 CSDC2Q9Y534 153 aaKnown RBP4.65□□□□□ -1.67
PPP4R1-211ENST00000578875 MACF1Q9UPN3 7388 aaKnown RBP4.65□□□□□ -1.67
PPP4R1-211ENST00000578875 PHF5AQ7RTV0 110 aaKnown RBP4.64□□□□□ -1.67
PPP4R1-211ENST00000578875 HIST1H4GQ99525 98 aa4.64□□□□□ -1.67
PPP4R1-211ENST00000578875 CDC42SE2Q9NRR3 84 aa4.64□□□□□ -1.67
PPP4R1-211ENST00000578875 IGLV7-46A0A075B6I9 117 aa4.63□□□□□ -1.67
PPP4R1-211ENST00000578875 IGHV1-58A0A0C4DH39 117 aa4.63□□□□□ -1.67
PPP4R1-211ENST00000578875 SPINK8P0C7L1 97 aa4.63□□□□□ -1.67
PPP4R1-211ENST00000578875 REG3AQ06141 175 aa4.63□□□□□ -1.67
PPP4R1-211ENST00000578875 TAL2Q16559 108 aa4.63□□□□□ -1.67
PPP4R1-211ENST00000578875 TPRXLQ17RH7 258 aa4.63□□□□□ -1.67
PPP4R1-211ENST00000578875 CEND1Q8N111 149 aa4.63□□□□□ -1.67
PPP4R1-211ENST00000578875 FAM104AQ969W3 186 aa4.63□□□□□ -1.67
PPP4R1-211ENST00000578875 LINC00526Q96FQ7 95 aa4.63□□□□□ -1.67
PPP4R1-211ENST00000578875 TSPEAR-AS2P59090 65 aa4.62□□□□□ -1.67
PPP4R1-211ENST00000578875 LINC00242Q5T6M2 205 aa4.62□□□□□ -1.67
PPP4R1-211ENST00000578875 CDKN2A-AS1Q9UH64 79 aa4.62□□□□□ -1.67
PPP4R1-211ENST00000578875 IGLV4-60A0A075B6I1 120 aa4.61□□□□□ -1.67
PPP4R1-211ENST00000578875 TMEM238LA0A1B0GVL6 79 aa4.61□□□□□ -1.67
PPP4R1-211ENST00000578875 A6NJY4 79 aa4.61□□□□□ -1.67
PPP4R1-211ENST00000578875 CFC1BP0CG36 223 aa4.61□□□□□ -1.67
PPP4R1-211ENST00000578875 SS18Q15532 418 aa4.61□□□□□ -1.67
PPP4R1-211ENST00000578875 ASB16-AS1Q495Z4 193 aa4.61□□□□□ -1.67
PPP4R1-211ENST00000578875 FAM19A3Q7Z5A8 133 aa4.61□□□□□ -1.67
PPP4R1-211ENST00000578875 IGLV5-45A0A087WSX0 123 aa4.6□□□□□ -1.67
PPP4R1-211ENST00000578875 GAGE12HA6NDE8 117 aa4.6□□□□□ -1.67
PPP4R1-211ENST00000578875 TMEM238C9JI98 176 aa4.6□□□□□ -1.67
PPP4R1-211ENST00000578875 SMIM13P0DJ93 91 aa4.6□□□□□ -1.67
PPP4R1-211ENST00000578875 RPL13AP40429 203 aaKnown RBP4.6□□□□□ -1.67
PPP4R1-211ENST00000578875 FXYD2P54710 66 aa4.6□□□□□ -1.67
PPP4R1-211ENST00000578875 GAGE2BQ13066 116 aa4.6□□□□□ -1.67
PPP4R1-211ENST00000578875 RAB37Q96AX2 223 aa4.6□□□□□ -1.67
PPP4R1-211ENST00000578875 NHP2Q9NX24 153 aaKnown RBP4.6□□□□□ -1.67
PPP4R1-211ENST00000578875 LINC00474Q9P2X8 69 aa4.6□□□□□ -1.67
PPP4R1-211ENST00000578875 NDUFA12Q9UI09 145 aa4.6□□□□□ -1.67
PPP4R1-211ENST00000578875 A0A0J9YXY3 114 aa4.59□□□□□ -1.67
PPP4R1-211ENST00000578875 LINC00959A0A1B0GUT2 108 aa4.59□□□□□ -1.67
PPP4R1-211ENST00000578875 A0A1B0GUV1 79 aa4.59□□□□□ -1.67
PPP4R1-211ENST00000578875 TAX1BP3O14907 124 aa4.59□□□□□ -1.67
PPP4R1-211ENST00000578875 Q6ZVH6 145 aa4.59□□□□□ -1.67
PPP4R1-211ENST00000578875 SPANXB1Q9NS25 103 aaPredicted RBP4.59□□□□□ -1.67
PPP4R1-211ENST00000578875 A0A087WZ39 114 aa4.58□□□□□ -1.68
PPP4R1-211ENST00000578875 TRAV8-4A0A0B4J246 113 aa4.58□□□□□ -1.68
PPP4R1-211ENST00000578875 SMIM1B2RUZ4 78 aa4.58□□□□□ -1.68
PPP4R1-211ENST00000578875 NDUFA1O15239 70 aa4.58□□□□□ -1.68
PPP4R1-211ENST00000578875 XCL1P47992 114 aa4.58□□□□□ -1.68
PPP4R1-211ENST00000578875 VAMP3Q15836 100 aa4.58□□□□□ -1.68
PPP4R1-211ENST00000578875 C9orf116Q5BN46 136 aaPredicted RBP4.58□□□□□ -1.68
PPP4R1-211ENST00000578875 MEIG1Q5JSS6 88 aa4.58□□□□□ -1.68
PPP4R1-211ENST00000578875 PPDPFQ9H3Y8 114 aa4.58□□□□□ -1.68
PPP4R1-211ENST00000578875 TOMM7Q9P0U1 55 aa4.58□□□□□ -1.68
PPP4R1-211ENST00000578875 A0A087X002 238 aa4.57□□□□□ -1.68
PPP4R1-211ENST00000578875 IGLV5-39A0A0G2JS06 123 aa4.57□□□□□ -1.68
PPP4R1-211ENST00000578875 C9orf118A6NHY6 69 aa4.57□□□□□ -1.68
PPP4R1-211ENST00000578875 CCL25O15444 150 aa4.57□□□□□ -1.68
PPP4R1-211ENST00000578875 RPL24P83731 157 aaKnown RBP4.57□□□□□ -1.68
PPP4R1-211ENST00000578875 C5orf38Q86SI9 138 aa4.57□□□□□ -1.68
PPP4R1-211ENST00000578875 KRTAP4-16G5E9R7 235 aaPredicted RBP4.56□□□□□ -1.68
PPP4R1-211ENST00000578875 H3BUT2 72 aa4.56□□□□□ -1.68
PPP4R1-211ENST00000578875 K7ERJ3 54 aa4.56□□□□□ -1.68
PPP4R1-211ENST00000578875 APOMO95445 188 aa4.56□□□□□ -1.68
PPP4R1-211ENST00000578875 PRSS2P07478 247 aa4.56□□□□□ -1.68
PPP4R1-211ENST00000578875 HERV-K104P63124 156 aa4.56□□□□□ -1.68
PPP4R1-211ENST00000578875 CFAP161Q6P656 301 aa4.56□□□□□ -1.68
PPP4R1-211ENST00000578875 COX7B2Q8TF08 81 aa4.56□□□□□ -1.68
PPP4R1-211ENST00000578875 GVQW2A0A096LPI5 108 aaPredicted RBP4.55□□□□□ -1.68
PPP4R1-211ENST00000578875 IGHV3OR16-9A0A0B4J2B5 98 aa4.55□□□□□ -1.68
PPP4R1-211ENST00000578875 MALP21145 153 aa4.55□□□□□ -1.68
PPP4R1-211ENST00000578875 NPC2P61916 151 aa4.55□□□□□ -1.68
PPP4R1-211ENST00000578875 KRTAP19-1Q8IUB9 90 aa4.55□□□□□ -1.68
PPP4R1-211ENST00000578875 MUSTN1Q8IVN3 82 aa4.55□□□□□ -1.68
PPP4R1-211ENST00000578875 CHCHD10Q8WYQ3 142 aaPredicted RBP4.55□□□□□ -1.68
PPP4R1-211ENST00000578875 ZNF625Q96I27 306 aaPredicted RBP4.55□□□□□ -1.68
PPP4R1-211ENST00000578875 NAA38Q9BRA0 125 aaKnown RBP4.55□□□□□ -1.68
PPP4R1-211ENST00000578875 SPANXDQ9BXN6 97 aa4.55□□□□□ -1.68
PPP4R1-211ENST00000578875 SPANXCQ9NY87 97 aa4.55□□□□□ -1.68
PPP4R1-211ENST00000578875 A0A0U1RRA0 63 aa4.54□□□□□ -1.68
PPP4R1-211ENST00000578875 COX7A2LO14548 114 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms